EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000000209 (Gene tree)
Gene ID: -
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 171022 bases
Position: chrscaffold_22:31525718-31696739
Accession: 100670148
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000000169	RRM_1	PF00076.22	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000000209	RBPMS-201	657	-	ENSLAFP00000000169	219 (aa)	XP_003412601	G3SL98

Gene Model

Click here to download ENSLAFG00000000209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000000209	RBPMS	64	78.014	ENSLAFG00000018725	RBPMS2	89	74.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000209	RBPMS	100	99.543	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
ENSLAFG00000000209	RBPMS	81	85.311	ENSAPOG00000022304	RBPMS	90	85.311	Acanthochromis_polyacanthus
ENSLAFG00000000209	RBPMS	99	93.548	ENSAMEG00000001522	RBPMS	99	93.548	Ailuropoda_melanoleuca
ENSLAFG00000000209	RBPMS	59	78.676	ENSACIG00000011395	RBPMS	77	76.224	Amphilophus_citrinellus
ENSLAFG00000000209	RBPMS	81	85.311	ENSAOCG00000007731	RBPMS	90	85.311	Amphiprion_ocellaris
ENSLAFG00000000209	RBPMS	81	85.311	ENSAPEG00000023543	RBPMS	90	85.311	Amphiprion_percula
ENSLAFG00000000209	RBPMS	81	85.311	ENSATEG00000018184	RBPMS	90	85.311	Anabas_testudineus
ENSLAFG00000000209	RBPMS	80	92.614	ENSACAG00000003012	RBPMS	90	92.614	Anolis_carolinensis
ENSLAFG00000000209	RBPMS	100	99.543	ENSANAG00000028150	RBPMS	100	99.543	Aotus_nancymaae
ENSLAFG00000000209	RBPMS	81	85.876	ENSACLG00000002926	RBPMS	90	85.876	Astatotilapia_calliptera
ENSLAFG00000000209	RBPMS	81	83.051	ENSAMXG00000033491	rbpms	91	83.051	Astyanax_mexicanus
ENSLAFG00000000209	RBPMS	100	99.087	ENSBTAG00000033727	RBPMS	100	99.087	Bos_taurus
ENSLAFG00000000209	RBPMS	100	99.087	ENSCJAG00000012366	RBPMS	100	99.087	Callithrix_jacchus
ENSLAFG00000000209	RBPMS	100	99.543	ENSCAFG00000006503	RBPMS	100	99.543	Canis_familiaris
ENSLAFG00000000209	RBPMS	100	99.543	ENSCAFG00020001031	RBPMS	100	99.543	Canis_lupus_dingo
ENSLAFG00000000209	RBPMS	81	92.135	ENSCHIG00000027156	RBPMS	90	92.135	Capra_hircus
ENSLAFG00000000209	RBPMS	50	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
ENSLAFG00000000209	RBPMS	100	98.630	ENSCPOG00000038597	RBPMS	100	98.630	Cavia_porcellus
ENSLAFG00000000209	RBPMS	81	98.870	ENSCCAG00000033226	RBPMS	90	98.870	Cebus_capucinus
ENSLAFG00000000209	RBPMS	100	99.543	ENSCATG00000036486	RBPMS	100	99.543	Cercocebus_atys
ENSLAFG00000000209	RBPMS	90	100.000	ENSCLAG00000001518	RBPMS	100	100.000	Chinchilla_lanigera
ENSLAFG00000000209	RBPMS	100	99.543	ENSCSAG00000015838	RBPMS	100	99.543	Chlorocebus_sabaeus
ENSLAFG00000000209	RBPMS	90	99.492	ENSCHOG00000008745	RBPMS	100	99.492	Choloepus_hoffmanni
ENSLAFG00000000209	RBPMS	80	91.429	ENSCPBG00000013437	RBPMS	90	91.429	Chrysemys_picta_bellii
ENSLAFG00000000209	RBPMS	90	100.000	ENSCANG00000034997	RBPMS	100	100.000	Colobus_angolensis_palliatus
ENSLAFG00000000209	RBPMS	100	98.636	ENSCGRG00001002814	Rbpms	100	98.636	Cricetulus_griseus_chok1gshd
ENSLAFG00000000209	RBPMS	90	99.495	ENSCGRG00000006095	Rbpms	100	99.495	Cricetulus_griseus_crigri
ENSLAFG00000000209	RBPMS	81	84.746	ENSCSEG00000002777	rbpms	88	87.037	Cynoglossus_semilaevis
ENSLAFG00000000209	RBPMS	81	85.311	ENSCVAG00000013975	RBPMS	90	85.311	Cyprinodon_variegatus
ENSLAFG00000000209	RBPMS	68	68.667	ENSDARG00000099396	rbpms	88	68.667	Danio_rerio
ENSLAFG00000000209	RBPMS	100	96.804	ENSDNOG00000008126	RBPMS	100	96.804	Dasypus_novemcinctus
ENSLAFG00000000209	RBPMS	100	98.630	ENSETEG00000017582	RBPMS	100	98.630	Echinops_telfairi
ENSLAFG00000000209	RBPMS	90	100.000	ENSEASG00005016962	RBPMS	99	100.000	Equus_asinus_asinus
ENSLAFG00000000209	RBPMS	100	99.087	ENSECAG00000020735	RBPMS	100	99.087	Equus_caballus
ENSLAFG00000000209	RBPMS	81	83.051	ENSELUG00000009787	rbpms	90	83.051	Esox_lucius
ENSLAFG00000000209	RBPMS	76	54.217	ENSFCAG00000022292	-	93	50.794	Felis_catus
ENSLAFG00000000209	RBPMS	100	99.087	ENSFCAG00000025639	-	100	99.087	Felis_catus
ENSLAFG00000000209	RBPMS	90	99.492	ENSFDAG00000012078	RBPMS	100	99.492	Fukomys_damarensis
ENSLAFG00000000209	RBPMS	80	85.143	ENSFHEG00000000618	rbpms	90	85.143	Fundulus_heteroclitus
ENSLAFG00000000209	RBPMS	69	56.954	ENSGMOG00000009646	-	100	56.954	Gadus_morhua
ENSLAFG00000000209	RBPMS	81	85.311	ENSGAFG00000016566	RBPMS	90	85.311	Gambusia_affinis
ENSLAFG00000000209	RBPMS	81	76.271	ENSGACG00000019471	rbpms	90	76.271	Gasterosteus_aculeatus
ENSLAFG00000000209	RBPMS	58	88.095	ENSGAGG00000023634	RBPMS	56	85.821	Gopherus_agassizii
ENSLAFG00000000209	RBPMS	81	85.876	ENSHBUG00000005888	RBPMS	90	85.876	Haplochromis_burtoni
ENSLAFG00000000209	RBPMS	100	99.543	ENSHGLG00000002303	RBPMS	100	99.543	Heterocephalus_glaber_female
ENSLAFG00000000209	RBPMS	90	100.000	ENSHGLG00100008787	RBPMS	100	100.000	Heterocephalus_glaber_male
ENSLAFG00000000209	RBPMS	79	86.127	ENSHCOG00000005774	rbpms	90	86.127	Hippocampus_comes
ENSLAFG00000000209	RBPMS	78	80.233	ENSIPUG00000012459	RBPMS	90	80.233	Ictalurus_punctatus
ENSLAFG00000000209	RBPMS	100	99.087	ENSSTOG00000026546	RBPMS	100	99.087	Ictidomys_tridecemlineatus
ENSLAFG00000000209	RBPMS	100	99.087	ENSJJAG00000014024	Rbpms	100	99.087	Jaculus_jaculus
ENSLAFG00000000209	RBPMS	51	88.393	ENSKMAG00000006377	RBPMS	78	72.078	Kryptolebias_marmoratus
ENSLAFG00000000209	RBPMS	81	85.311	ENSLBEG00000027989	RBPMS	87	89.032	Labrus_bergylta
ENSLAFG00000000209	RBPMS	71	89.744	ENSLOCG00000013199	RBPMS	86	89.744	Lepisosteus_oculatus
ENSLAFG00000000209	RBPMS	100	99.543	ENSMFAG00000036911	RBPMS	100	99.543	Macaca_fascicularis
ENSLAFG00000000209	RBPMS	100	99.543	ENSMMUG00000000458	RBPMS	100	99.543	Macaca_mulatta
ENSLAFG00000000209	RBPMS	100	99.543	ENSMNEG00000043805	RBPMS	100	99.543	Macaca_nemestrina
ENSLAFG00000000209	RBPMS	90	100.000	ENSMLEG00000015635	RBPMS	100	100.000	Mandrillus_leucophaeus
ENSLAFG00000000209	RBPMS	60	84.848	ENSMAMG00000004604	RBPMS	71	82.482	Mastacembelus_armatus
ENSLAFG00000000209	RBPMS	81	85.876	ENSMZEG00005000698	RBPMS	90	85.876	Maylandia_zebra
ENSLAFG00000000209	RBPMS	71	96.154	ENSMGAG00000005088	RBPMS	80	96.154	Meleagris_gallopavo
ENSLAFG00000000209	RBPMS	100	98.636	ENSMAUG00000018892	Rbpms	100	98.636	Mesocricetus_auratus
ENSLAFG00000000209	RBPMS	100	97.260	ENSMICG00000001295	RBPMS	100	97.260	Microcebus_murinus
ENSLAFG00000000209	RBPMS	100	98.636	ENSMOCG00000014009	Rbpms	100	98.636	Microtus_ochrogaster
ENSLAFG00000000209	RBPMS	71	87.821	ENSMMOG00000012036	RBPMS	66	87.821	Mola_mola
ENSLAFG00000000209	RBPMS	78	92.941	ENSMODG00000019006	RBPMS	83	90.341	Monodelphis_domestica
ENSLAFG00000000209	RBPMS	80	84.000	ENSMALG00000003261	RBPMS	90	84.000	Monopterus_albus
ENSLAFG00000000209	RBPMS	100	98.636	MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	Mus_caroli
ENSLAFG00000000209	RBPMS	100	98.636	ENSMUSG00000031586	Rbpms	100	98.636	Mus_musculus
ENSLAFG00000000209	RBPMS	100	98.182	MGP_PahariEiJ_G0021439	Rbpms	100	98.182	Mus_pahari
ENSLAFG00000000209	RBPMS	100	98.636	MGP_SPRETEiJ_G0032087	Rbpms	100	98.636	Mus_spretus
ENSLAFG00000000209	RBPMS	93	98.039	ENSMPUG00000011314	RBPMS	93	98.039	Mustela_putorius_furo
ENSLAFG00000000209	RBPMS	81	98.305	ENSMLUG00000009391	RBPMS	100	98.734	Myotis_lucifugus
ENSLAFG00000000209	RBPMS	100	99.543	ENSNGAG00000011141	Rbpms	100	99.543	Nannospalax_galili
ENSLAFG00000000209	RBPMS	71	89.032	ENSNBRG00000003313	RBPMS	86	89.032	Neolamprologus_brichardi
ENSLAFG00000000209	RBPMS	100	99.087	ENSNLEG00000036183	-	100	99.087	Nomascus_leucogenys
ENSLAFG00000000209	RBPMS	100	78.995	ENSOPRG00000013151	RBPMS	100	78.995	Ochotona_princeps
ENSLAFG00000000209	RBPMS	100	99.543	ENSODEG00000006700	RBPMS	100	99.543	Octodon_degus
ENSLAFG00000000209	RBPMS	71	88.462	ENSONIG00000007546	RBPMS	89	88.462	Oreochromis_niloticus
ENSLAFG00000000209	RBPMS	100	99.087	ENSOCUG00000008572	RBPMS	100	99.087	Oryctolagus_cuniculus
ENSLAFG00000000209	RBPMS	81	84.181	ENSORLG00000004135	-	90	84.181	Oryzias_latipes
ENSLAFG00000000209	RBPMS	81	84.746	ENSORLG00020016179	RBPMS	90	84.746	Oryzias_latipes_hni
ENSLAFG00000000209	RBPMS	81	84.746	ENSORLG00015013770	RBPMS	90	84.746	Oryzias_latipes_hsok
ENSLAFG00000000209	RBPMS	81	84.746	ENSOMEG00000005044	RBPMS	90	84.746	Oryzias_melastigma
ENSLAFG00000000209	RBPMS	85	94.149	ENSOGAG00000030298	RBPMS	84	94.149	Otolemur_garnettii
ENSLAFG00000000209	RBPMS	61	88.722	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
ENSLAFG00000000209	RBPMS	90	100.000	ENSPPAG00000033108	RBPMS	100	100.000	Pan_paniscus
ENSLAFG00000000209	RBPMS	100	99.087	ENSPPRG00000004836	RBPMS	100	99.087	Panthera_pardus
ENSLAFG00000000209	RBPMS	90	100.000	ENSPTIG00000015964	RBPMS	90	100.000	Panthera_tigris_altaica
ENSLAFG00000000209	RBPMS	100	99.543	ENSPTRG00000020135	RBPMS	100	99.543	Pan_troglodytes
ENSLAFG00000000209	RBPMS	100	99.543	ENSPANG00000008143	RBPMS	100	99.543	Papio_anubis
ENSLAFG00000000209	RBPMS	78	81.765	ENSPKIG00000004836	rbpms	89	81.765	Paramormyrops_kingsleyae
ENSLAFG00000000209	RBPMS	80	82.286	ENSPKIG00000000535	-	90	82.286	Paramormyrops_kingsleyae
ENSLAFG00000000209	RBPMS	71	95.484	ENSPSIG00000006136	RBPMS	88	95.484	Pelodiscus_sinensis
ENSLAFG00000000209	RBPMS	90	74.752	ENSPMGG00000018012	RBPMS	91	75.248	Periophthalmus_magnuspinnatus
ENSLAFG00000000209	RBPMS	100	96.833	ENSPEMG00000021130	Rbpms	100	96.833	Peromyscus_maniculatus_bairdii
ENSLAFG00000000209	RBPMS	89	79.899	ENSPCIG00000019298	-	81	79.899	Phascolarctos_cinereus
ENSLAFG00000000209	RBPMS	81	85.311	ENSPFOG00000017158	RBPMS	90	85.311	Poecilia_formosa
ENSLAFG00000000209	RBPMS	81	85.311	ENSPLAG00000010767	RBPMS	90	85.311	Poecilia_latipinna
ENSLAFG00000000209	RBPMS	81	85.311	ENSPMEG00000009788	RBPMS	90	85.311	Poecilia_mexicana
ENSLAFG00000000209	RBPMS	81	85.311	ENSPREG00000016959	RBPMS	90	85.311	Poecilia_reticulata
ENSLAFG00000000209	RBPMS	100	99.543	ENSPPYG00000018487	RBPMS	100	99.543	Pongo_abelii
ENSLAFG00000000209	RBPMS	50	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
ENSLAFG00000000209	RBPMS	100	86.758	ENSPCOG00000015948	RBPMS	100	86.758	Propithecus_coquereli
ENSLAFG00000000209	RBPMS	99	98.165	ENSPVAG00000001661	RBPMS	99	98.165	Pteropus_vampyrus
ENSLAFG00000000209	RBPMS	81	85.876	ENSPNYG00000001172	RBPMS	90	85.876	Pundamilia_nyererei
ENSLAFG00000000209	RBPMS	81	84.181	ENSPNAG00000029160	RBPMS	91	84.181	Pygocentrus_nattereri
ENSLAFG00000000209	RBPMS	100	98.636	ENSRNOG00000013328	Rbpms	100	98.636	Rattus_norvegicus
ENSLAFG00000000209	RBPMS	95	95.215	ENSRBIG00000038218	RBPMS	89	99.355	Rhinopithecus_bieti
ENSLAFG00000000209	RBPMS	100	99.543	ENSRROG00000042518	RBPMS	100	99.543	Rhinopithecus_roxellana
ENSLAFG00000000209	RBPMS	100	99.087	ENSSBOG00000026670	RBPMS	100	99.087	Saimiri_boliviensis_boliviensis
ENSLAFG00000000209	RBPMS	79	89.655	ENSSHAG00000010114	RBPMS	89	89.655	Sarcophilus_harrisii
ENSLAFG00000000209	RBPMS	71	83.871	ENSSFOG00015017481	-	89	81.176	Scleropages_formosus
ENSLAFG00000000209	RBPMS	81	82.486	ENSSFOG00015000417	rbpms	90	82.486	Scleropages_formosus
ENSLAFG00000000209	RBPMS	80	85.714	ENSSMAG00000010871	rbpms	90	85.714	Scophthalmus_maximus
ENSLAFG00000000209	RBPMS	81	85.311	ENSSDUG00000010894	RBPMS	90	85.311	Seriola_dumerili
ENSLAFG00000000209	RBPMS	81	85.311	ENSSLDG00000012916	RBPMS	90	85.311	Seriola_lalandi_dorsalis
ENSLAFG00000000209	RBPMS	100	94.977	ENSSARG00000000274	RBPMS	100	94.977	Sorex_araneus
ENSLAFG00000000209	RBPMS	78	91.279	ENSSPUG00000017525	RBPMS	66	91.279	Sphenodon_punctatus
ENSLAFG00000000209	RBPMS	61	84.211	ENSSPAG00000004777	rbpms	82	83.704	Stegastes_partitus
ENSLAFG00000000209	RBPMS	100	99.087	ENSSSCG00000015846	RBPMS	100	99.087	Sus_scrofa
ENSLAFG00000000209	RBPMS	78	92.398	ENSTGUG00000001776	RBPMS	90	92.398	Taeniopygia_guttata
ENSLAFG00000000209	RBPMS	81	85.311	ENSTRUG00000000041	RBPMS	90	85.311	Takifugu_rubripes
ENSLAFG00000000209	RBPMS	100	98.174	ENSTTRG00000012451	RBPMS	100	98.174	Tursiops_truncatus
ENSLAFG00000000209	RBPMS	53	95.690	ENSUAMG00000026353	RBPMS	76	95.690	Ursus_americanus
ENSLAFG00000000209	RBPMS	90	99.495	ENSUMAG00000007347	RBPMS	96	99.495	Ursus_maritimus
ENSLAFG00000000209	RBPMS	90	100.000	ENSVPAG00000010991	RBPMS	100	100.000	Vicugna_pacos
ENSLAFG00000000209	RBPMS	100	99.543	ENSVVUG00000019770	RBPMS	100	99.543	Vulpes_vulpes
ENSLAFG00000000209	RBPMS	71	94.194	ENSXETG00000011290	rbpms	89	94.194	Xenopus_tropicalis
ENSLAFG00000000209	RBPMS	80	75.568	ENSXCOG00000002436	RBPMS	89	75.568	Xiphophorus_couchianus
ENSLAFG00000000209	RBPMS	81	85.311	ENSXMAG00000027637	RBPMS	90	85.311	Xiphophorus_maculatus