EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000000474 (Gene tree)
Gene ID: -
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 24828 bases
Position: chrscaffold_78:173560-198387
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000025264	RRM_1	PF00076.22	1.4e-25	1	1
ENSLAFP00000000402	RRM_1	PF00076.22	1.4e-25	1	1
ENSLAFP00000021656	RRM_1	PF00076.22	1.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000028768	CSTF2-202	1791	-	ENSLAFP00000021656	597 (aa)	-	G3U1E8
ENSLAFT00000000475	CSTF2-203	1731	-	ENSLAFP00000000402	577 (aa)	-	G3SLT0
ENSLAFT00000037330	CSTF2-201	1728	-	ENSLAFP00000025264	575 (aa)	-	G3UBQ6

Gene Model

Click here to download ENSLAFG00000000474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000000474	CSTF2	99	73.785	ENSLAFG00000002058	CSTF2T	99	74.439

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000474	CSTF2	100	92.295	ENSG00000101811	CSTF2	96	97.674	Homo_sapiens
ENSLAFG00000000474	CSTF2	99	58.557	ENSAPOG00000005630	cstf2	97	59.473	Acanthochromis_polyacanthus
ENSLAFG00000000474	CSTF2	100	91.626	ENSAMEG00000002082	CSTF2	100	91.626	Ailuropoda_melanoleuca
ENSLAFG00000000474	CSTF2	88	80.080	ENSAOCG00000020905	cstf2	97	59.391	Amphiprion_ocellaris
ENSLAFG00000000474	CSTF2	99	58.264	ENSAPEG00000006526	cstf2	97	59.638	Amphiprion_percula
ENSLAFG00000000474	CSTF2	87	81.070	ENSATEG00000018186	cstf2	96	58.167	Anabas_testudineus
ENSLAFG00000000474	CSTF2	97	79.592	ENSAPLG00000007255	CSTF2	98	78.788	Anas_platyrhynchos
ENSLAFG00000000474	CSTF2	100	91.334	ENSANAG00000022342	CSTF2	100	91.334	Aotus_nancymaae
ENSLAFG00000000474	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSLAFG00000000474	CSTF2	100	92.374	ENSBTAG00000003547	CSTF2	100	92.374	Bos_taurus
ENSLAFG00000000474	CSTF2	100	91.625	ENSCJAG00000004422	CSTF2	100	94.949	Callithrix_jacchus
ENSLAFG00000000474	CSTF2	100	93.241	ENSCAFG00000017551	CSTF2	100	93.241	Canis_familiaris
ENSLAFG00000000474	CSTF2	100	93.300	ENSCAFG00020007619	CSTF2	100	93.300	Canis_lupus_dingo
ENSLAFG00000000474	CSTF2	100	92.374	ENSCHIG00000016994	CSTF2	100	92.374	Capra_hircus
ENSLAFG00000000474	CSTF2	100	92.965	ENSTSYG00000006529	CSTF2	100	92.965	Carlito_syrichta
ENSLAFG00000000474	CSTF2	100	91.122	ENSCPOG00000015255	CSTF2	100	91.122	Cavia_porcellus
ENSLAFG00000000474	CSTF2	100	91.625	ENSCCAG00000032975	CSTF2	100	91.625	Cebus_capucinus
ENSLAFG00000000474	CSTF2	100	92.462	ENSCATG00000022835	CSTF2	100	92.462	Cercocebus_atys
ENSLAFG00000000474	CSTF2	100	91.122	ENSCLAG00000001904	CSTF2	100	91.122	Chinchilla_lanigera
ENSLAFG00000000474	CSTF2	100	92.630	ENSCSAG00000010360	CSTF2	100	92.630	Chlorocebus_sabaeus
ENSLAFG00000000474	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSLAFG00000000474	CSTF2	100	77.245	ENSCPBG00000014293	CSTF2	100	76.471	Chrysemys_picta_bellii
ENSLAFG00000000474	CSTF2	100	92.630	ENSCANG00000030612	CSTF2	100	92.630	Colobus_angolensis_palliatus
ENSLAFG00000000474	CSTF2	100	88.276	ENSCGRG00001023023	Cstf2	100	87.069	Cricetulus_griseus_chok1gshd
ENSLAFG00000000474	CSTF2	100	86.379	ENSCGRG00000003897	Cstf2	100	85.172	Cricetulus_griseus_crigri
ENSLAFG00000000474	CSTF2	87	83.402	ENSCVAG00000005731	cstf2	96	60.241	Cyprinodon_variegatus
ENSLAFG00000000474	CSTF2	72	98.182	ENSDARG00000090788	cstf2	97	92.188	Danio_rerio
ENSLAFG00000000474	CSTF2	100	88.601	ENSDORG00000007195	Cstf2	100	88.601	Dipodomys_ordii
ENSLAFG00000000474	CSTF2	73	98.649	ENSETEG00000004931	CSTF2	68	98.649	Echinops_telfairi
ENSLAFG00000000474	CSTF2	100	92.462	ENSEASG00005001216	CSTF2	100	92.462	Equus_asinus_asinus
ENSLAFG00000000474	CSTF2	100	92.462	ENSECAG00000009325	CSTF2	100	92.462	Equus_caballus
ENSLAFG00000000474	CSTF2	100	92.797	ENSFCAG00000007000	CSTF2	100	92.797	Felis_catus
ENSLAFG00000000474	CSTF2	92	78.863	ENSFALG00000003859	CSTF2	100	78.863	Ficedula_albicollis
ENSLAFG00000000474	CSTF2	100	90.815	ENSFDAG00000002416	CSTF2	100	90.815	Fukomys_damarensis
ENSLAFG00000000474	CSTF2	87	81.743	ENSFHEG00000017065	cstf2	93	60.413	Fundulus_heteroclitus
ENSLAFG00000000474	CSTF2	83	78.390	ENSGMOG00000005145	cstf2	99	56.014	Gadus_morhua
ENSLAFG00000000474	CSTF2	100	79.352	ENSGALG00000006760	CSTF2	100	84.333	Gallus_gallus
ENSLAFG00000000474	CSTF2	85	80.000	ENSGAFG00000020027	cstf2	96	58.549	Gambusia_affinis
ENSLAFG00000000474	CSTF2	99	55.882	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSLAFG00000000474	CSTF2	100	79.048	ENSGAGG00000006037	CSTF2	100	79.841	Gopherus_agassizii
ENSLAFG00000000474	CSTF2	100	92.295	ENSGGOG00000022267	CSTF2	100	92.295	Gorilla_gorilla
ENSLAFG00000000474	CSTF2	64	82.305	ENSHBUG00000016183	cstf2	93	59.603	Haplochromis_burtoni
ENSLAFG00000000474	CSTF2	100	77.990	ENSHGLG00000013455	-	100	77.990	Heterocephalus_glaber_female
ENSLAFG00000000474	CSTF2	100	91.161	ENSHGLG00000000659	-	100	91.161	Heterocephalus_glaber_female
ENSLAFG00000000474	CSTF2	100	91.161	ENSHGLG00100001130	-	100	91.161	Heterocephalus_glaber_male
ENSLAFG00000000474	CSTF2	100	78.163	ENSHGLG00100015391	-	100	78.163	Heterocephalus_glaber_male
ENSLAFG00000000474	CSTF2	84	82.041	ENSHCOG00000005157	cstf2	97	59.380	Hippocampus_comes
ENSLAFG00000000474	CSTF2	100	70.862	ENSIPUG00000017839	cstf2	99	60.922	Ictalurus_punctatus
ENSLAFG00000000474	CSTF2	100	91.681	ENSSTOG00000023445	CSTF2	100	90.295	Ictidomys_tridecemlineatus
ENSLAFG00000000474	CSTF2	100	90.641	ENSJJAG00000020507	Cstf2	100	90.641	Jaculus_jaculus
ENSLAFG00000000474	CSTF2	84	82.158	ENSKMAG00000001068	cstf2	96	59.337	Kryptolebias_marmoratus
ENSLAFG00000000474	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	82	94.915	Labrus_bergylta
ENSLAFG00000000474	CSTF2	99	65.902	ENSLACG00000015927	CSTF2	99	68.144	Latimeria_chalumnae
ENSLAFG00000000474	CSTF2	99	66.205	ENSLOCG00000015300	cstf2	93	66.149	Lepisosteus_oculatus
ENSLAFG00000000474	CSTF2	100	92.630	ENSMFAG00000043888	CSTF2	100	92.630	Macaca_fascicularis
ENSLAFG00000000474	CSTF2	100	92.630	ENSMMUG00000013008	CSTF2	100	92.630	Macaca_mulatta
ENSLAFG00000000474	CSTF2	100	92.630	ENSMNEG00000041824	CSTF2	100	92.630	Macaca_nemestrina
ENSLAFG00000000474	CSTF2	100	92.630	ENSMLEG00000036870	CSTF2	100	92.630	Mandrillus_leucophaeus
ENSLAFG00000000474	CSTF2	82	80.435	ENSMAMG00000020364	cstf2	96	57.555	Mastacembelus_armatus
ENSLAFG00000000474	CSTF2	93	98.333	ENSMGAG00000004139	CSTF2	89	98.333	Meleagris_gallopavo
ENSLAFG00000000474	CSTF2	100	88.448	ENSMAUG00000000965	Cstf2	100	88.448	Mesocricetus_auratus
ENSLAFG00000000474	CSTF2	100	91.960	ENSMICG00000014121	CSTF2	100	91.960	Microcebus_murinus
ENSLAFG00000000474	CSTF2	100	87.931	ENSMOCG00000008081	Cstf2	100	87.931	Microtus_ochrogaster
ENSLAFG00000000474	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	54.152	Mola_mola
ENSLAFG00000000474	CSTF2	100	82.178	ENSMODG00000011785	CSTF2	100	82.838	Monodelphis_domestica
ENSLAFG00000000474	CSTF2	100	88.448	MGP_CAROLIEiJ_G0033383	Cstf2	100	88.448	Mus_caroli
ENSLAFG00000000474	CSTF2	100	88.448	ENSMUSG00000031256	Cstf2	100	88.448	Mus_musculus
ENSLAFG00000000474	CSTF2	100	88.428	MGP_PahariEiJ_G0031923	Cstf2	100	88.601	Mus_pahari
ENSLAFG00000000474	CSTF2	100	88.448	MGP_SPRETEiJ_G0034548	Cstf2	100	88.448	Mus_spretus
ENSLAFG00000000474	CSTF2	100	87.244	ENSMPUG00000002339	CSTF2	100	87.244	Mustela_putorius_furo
ENSLAFG00000000474	CSTF2	100	86.010	ENSMLUG00000004598	CSTF2	98	86.010	Myotis_lucifugus
ENSLAFG00000000474	CSTF2	100	89.465	ENSNGAG00000021985	Cstf2	100	89.637	Nannospalax_galili
ENSLAFG00000000474	CSTF2	93	63.861	ENSNBRG00000021694	cstf2	100	55.437	Neolamprologus_brichardi
ENSLAFG00000000474	CSTF2	100	92.462	ENSNLEG00000007510	CSTF2	100	92.462	Nomascus_leucogenys
ENSLAFG00000000474	CSTF2	100	82.669	ENSMEUG00000011186	-	100	84.055	Notamacropus_eugenii
ENSLAFG00000000474	CSTF2	100	78.510	ENSMEUG00000007875	-	100	79.203	Notamacropus_eugenii
ENSLAFG00000000474	CSTF2	91	79.468	ENSMEUG00000014025	-	100	80.608	Notamacropus_eugenii
ENSLAFG00000000474	CSTF2	87	80.543	ENSOPRG00000003106	CSTF2	89	80.769	Ochotona_princeps
ENSLAFG00000000474	CSTF2	100	90.295	ENSODEG00000002059	CSTF2	100	90.295	Octodon_degus
ENSLAFG00000000474	CSTF2	99	56.006	ENSONIG00000002631	cstf2	99	57.854	Oreochromis_niloticus
ENSLAFG00000000474	CSTF2	95	98.182	ENSOANG00000004208	CSTF2	87	98.361	Ornithorhynchus_anatinus
ENSLAFG00000000474	CSTF2	100	89.863	ENSOCUG00000010468	CSTF2	100	89.863	Oryctolagus_cuniculus
ENSLAFG00000000474	CSTF2	86	81.328	ENSORLG00000001380	cstf2	97	58.603	Oryzias_latipes
ENSLAFG00000000474	CSTF2	86	81.743	ENSORLG00020021917	cstf2	97	58.773	Oryzias_latipes_hni
ENSLAFG00000000474	CSTF2	86	81.328	ENSORLG00015011996	cstf2	97	58.603	Oryzias_latipes_hsok
ENSLAFG00000000474	CSTF2	86	82.158	ENSOMEG00000015507	cstf2	97	60.276	Oryzias_melastigma
ENSLAFG00000000474	CSTF2	100	87.281	ENSOGAG00000011192	CSTF2	100	87.281	Otolemur_garnettii
ENSLAFG00000000474	CSTF2	100	92.374	ENSOARG00000001022	CSTF2	100	92.374	Ovis_aries
ENSLAFG00000000474	CSTF2	100	92.295	ENSPPAG00000031804	CSTF2	100	92.295	Pan_paniscus
ENSLAFG00000000474	CSTF2	100	92.797	ENSPPRG00000022492	CSTF2	100	92.797	Panthera_pardus
ENSLAFG00000000474	CSTF2	100	92.462	ENSPTIG00000009922	CSTF2	100	92.462	Panthera_tigris_altaica
ENSLAFG00000000474	CSTF2	100	92.295	ENSPTRG00000022090	CSTF2	100	92.295	Pan_troglodytes
ENSLAFG00000000474	CSTF2	100	92.630	ENSPANG00000002303	CSTF2	100	92.630	Papio_anubis
ENSLAFG00000000474	CSTF2	99	62.521	ENSPKIG00000005033	cstf2	97	61.217	Paramormyrops_kingsleyae
ENSLAFG00000000474	CSTF2	87	82.988	ENSPMGG00000006534	cstf2	97	58.864	Periophthalmus_magnuspinnatus
ENSLAFG00000000474	CSTF2	100	87.759	ENSPEMG00000019415	Cstf2	100	87.759	Peromyscus_maniculatus_bairdii
ENSLAFG00000000474	CSTF2	100	82.102	ENSPCIG00000002989	CSTF2	100	82.759	Phascolarctos_cinereus
ENSLAFG00000000474	CSTF2	85	80.400	ENSPLAG00000011176	cstf2	96	57.286	Poecilia_latipinna
ENSLAFG00000000474	CSTF2	85	80.400	ENSPMEG00000017743	cstf2	96	56.833	Poecilia_mexicana
ENSLAFG00000000474	CSTF2	60	70.930	ENSPREG00000011481	cstf2	97	59.760	Poecilia_reticulata
ENSLAFG00000000474	CSTF2	100	92.462	ENSPPYG00000020541	CSTF2	100	92.462	Pongo_abelii
ENSLAFG00000000474	CSTF2	100	92.462	ENSPCOG00000027744	CSTF2	100	92.462	Propithecus_coquereli
ENSLAFG00000000474	CSTF2	97	77.558	ENSPVAG00000008342	CSTF2	100	77.558	Pteropus_vampyrus
ENSLAFG00000000474	CSTF2	99	60.558	ENSPNAG00000018887	cstf2	99	61.140	Pygocentrus_nattereri
ENSLAFG00000000474	CSTF2	100	89.138	ENSRNOG00000048025	Cstf2	100	89.138	Rattus_norvegicus
ENSLAFG00000000474	CSTF2	100	91.334	ENSRBIG00000030745	CSTF2	100	91.334	Rhinopithecus_bieti
ENSLAFG00000000474	CSTF2	100	92.630	ENSRROG00000045042	CSTF2	100	92.630	Rhinopithecus_roxellana
ENSLAFG00000000474	CSTF2	100	91.625	ENSSBOG00000021649	CSTF2	100	91.625	Saimiri_boliviensis_boliviensis
ENSLAFG00000000474	CSTF2	97	100.000	ENSSHAG00000003681	CSTF2	87	100.000	Sarcophilus_harrisii
ENSLAFG00000000474	CSTF2	99	63.894	ENSSFOG00015006348	cstf2	98	63.682	Scleropages_formosus
ENSLAFG00000000474	CSTF2	86	83.402	ENSSMAG00000013463	cstf2	96	59.445	Scophthalmus_maximus
ENSLAFG00000000474	CSTF2	90	80.932	ENSSPUG00000005288	-	97	81.197	Sphenodon_punctatus
ENSLAFG00000000474	CSTF2	100	92.462	ENSSSCG00000012486	CSTF2	100	94.276	Sus_scrofa
ENSLAFG00000000474	CSTF2	100	80.272	ENSTGUG00000002253	CSTF2	100	80.272	Taeniopygia_guttata
ENSLAFG00000000474	CSTF2	99	60.102	ENSTNIG00000016860	cstf2	99	59.046	Tetraodon_nigroviridis
ENSLAFG00000000474	CSTF2	54	100.000	ENSTBEG00000010029	-	58	100.000	Tupaia_belangeri
ENSLAFG00000000474	CSTF2	100	92.028	ENSTTRG00000013556	CSTF2	100	92.028	Tursiops_truncatus
ENSLAFG00000000474	CSTF2	100	92.525	ENSUAMG00000026605	CSTF2	100	92.525	Ursus_americanus
ENSLAFG00000000474	CSTF2	100	87.437	ENSUMAG00000012417	CSTF2	100	95.848	Ursus_maritimus
ENSLAFG00000000474	CSTF2	73	93.586	ENSVPAG00000006466	CSTF2	72	93.586	Vicugna_pacos
ENSLAFG00000000474	CSTF2	100	93.241	ENSVVUG00000004717	CSTF2	100	93.241	Vulpes_vulpes
ENSLAFG00000000474	CSTF2	100	65.232	ENSXETG00000009642	cstf2	100	65.285	Xenopus_tropicalis
ENSLAFG00000000474	CSTF2	71	96.970	ENSXCOG00000016436	cstf2	70	96.970	Xiphophorus_couchianus
ENSLAFG00000000474	CSTF2	60	69.679	ENSXMAG00000013524	cstf2	97	55.520	Xiphophorus_maculatus