EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000000867 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 9419 bases
Position: chrscaffold_3:57517663-57527081
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000000723	RRM_1	PF00076.22	4.6e-17	1	1
ENSLAFP00000000723	RRM_3	PF08777.11	2.2e-29	1	1
ENSLAFP00000000723	La	PF05383.17	6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000000867	-	1269	-	ENSLAFP00000000723	422 (aa)	-	G3SMH8

Gene Model

Click here to download ENSLAFG00000000867's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000000867's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000000867	-	72	70.530	ENSLAFG00000026721	-	99	70.530
ENSLAFG00000000867	-	100	81.517	ENSLAFG00000028909	-	100	80.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000000867	-	100	88.471	ENSG00000138385	SSB	100	98.333	Homo_sapiens
ENSLAFG00000000867	-	99	52.019	ENSAPOG00000003448	ssb	98	54.453	Acanthochromis_polyacanthus
ENSLAFG00000000867	-	100	88.941	ENSAMEG00000010507	SSB	100	88.941	Ailuropoda_melanoleuca
ENSLAFG00000000867	-	92	55.385	ENSACIG00000001738	ssb	97	54.476	Amphilophus_citrinellus
ENSLAFG00000000867	-	99	52.494	ENSAOCG00000020398	ssb	98	54.962	Amphiprion_ocellaris
ENSLAFG00000000867	-	99	52.969	ENSAPEG00000020395	ssb	98	55.471	Amphiprion_percula
ENSLAFG00000000867	-	99	55.107	ENSATEG00000016884	ssb	100	55.107	Anabas_testudineus
ENSLAFG00000000867	-	100	71.294	ENSAPLG00000006109	SSB	100	71.529	Anas_platyrhynchos
ENSLAFG00000000867	-	100	64.569	ENSACAG00000017008	SSB	99	63.380	Anolis_carolinensis
ENSLAFG00000000867	-	100	77.488	ENSANAG00000027195	-	100	77.251	Aotus_nancymaae
ENSLAFG00000000867	-	99	52.969	ENSACLG00000010798	ssb	100	52.732	Astatotilapia_calliptera
ENSLAFG00000000867	-	98	51.905	ENSAMXG00000012606	ssb	100	51.765	Astyanax_mexicanus
ENSLAFG00000000867	-	100	88.626	ENSBTAG00000008716	SSB	100	85.782	Bos_taurus
ENSLAFG00000000867	-	70	35.762	WBGene00016653	C44E4.4	76	35.762	Caenorhabditis_elegans
ENSLAFG00000000867	-	100	87.915	ENSCJAG00000045073	SSB	100	86.493	Callithrix_jacchus
ENSLAFG00000000867	-	100	88.389	ENSCAFG00000012418	SSB	100	86.730	Canis_familiaris
ENSLAFG00000000867	-	100	88.389	ENSCAFG00020002900	SSB	100	86.730	Canis_lupus_dingo
ENSLAFG00000000867	-	100	88.626	ENSCHIG00000022624	-	100	87.204	Capra_hircus
ENSLAFG00000000867	-	100	83.175	ENSCHIG00000022196	-	100	81.991	Capra_hircus
ENSLAFG00000000867	-	100	89.100	ENSTSYG00000000097	SSB	100	86.256	Carlito_syrichta
ENSLAFG00000000867	-	100	89.573	ENSCPOG00000003338	SSB	100	86.730	Cavia_porcellus
ENSLAFG00000000867	-	100	88.863	ENSCCAG00000035147	SSB	100	86.019	Cebus_capucinus
ENSLAFG00000000867	-	100	68.720	ENSCATG00000036701	SSB	100	67.299	Cercocebus_atys
ENSLAFG00000000867	-	100	65.403	ENSCATG00000042909	-	100	63.744	Cercocebus_atys
ENSLAFG00000000867	-	100	89.573	ENSCLAG00000015617	-	100	86.730	Chinchilla_lanigera
ENSLAFG00000000867	-	100	89.100	ENSCSAG00000015200	SSB	89	87.678	Chlorocebus_sabaeus
ENSLAFG00000000867	-	98	80.918	ENSCSAG00000018390	-	96	80.808	Chlorocebus_sabaeus
ENSLAFG00000000867	-	100	89.810	ENSCHOG00000007763	SSB	100	86.967	Choloepus_hoffmanni
ENSLAFG00000000867	-	100	73.239	ENSCPBG00000006519	SSB	100	74.353	Chrysemys_picta_bellii
ENSLAFG00000000867	-	98	70.120	ENSCANG00000028838	-	91	71.285	Colobus_angolensis_palliatus
ENSLAFG00000000867	-	100	89.100	ENSCANG00000027695	SSB	100	87.678	Colobus_angolensis_palliatus
ENSLAFG00000000867	-	100	75.118	ENSCANG00000033240	-	100	72.512	Colobus_angolensis_palliatus
ENSLAFG00000000867	-	100	75.355	ENSCGRG00001024831	Ssb	100	75.592	Cricetulus_griseus_chok1gshd
ENSLAFG00000000867	-	100	75.355	ENSCGRG00000005387	Ssb	100	75.592	Cricetulus_griseus_crigri
ENSLAFG00000000867	-	98	54.348	ENSCSEG00000011599	ssb	99	53.865	Cynoglossus_semilaevis
ENSLAFG00000000867	-	99	54.869	ENSCVAG00000021558	ssb	100	54.394	Cyprinodon_variegatus
ENSLAFG00000000867	-	98	53.461	ENSDARG00000029252	ssb	99	53.606	Danio_rerio
ENSLAFG00000000867	-	100	89.336	ENSDNOG00000013450	SSB	100	87.678	Dasypus_novemcinctus
ENSLAFG00000000867	-	100	80.332	ENSDORG00000005543	Ssb	100	79.621	Dipodomys_ordii
ENSLAFG00000000867	-	65	35.135	FBgn0011638	La	73	35.974	Drosophila_melanogaster
ENSLAFG00000000867	-	56	94.527	ENSETEG00000004614	-	52	94.527	Echinops_telfairi
ENSLAFG00000000867	-	96	44.118	ENSEBUG00000001237	ssb	92	45.989	Eptatretus_burgeri
ENSLAFG00000000867	-	100	89.336	ENSEASG00005022835	SSB	100	86.493	Equus_asinus_asinus
ENSLAFG00000000867	-	100	89.573	ENSECAG00000018495	SSB	100	86.730	Equus_caballus
ENSLAFG00000000867	-	73	74.510	ENSEEUG00000008077	SSB	78	74.510	Erinaceus_europaeus
ENSLAFG00000000867	-	99	56.532	ENSELUG00000020929	ssb	100	56.295	Esox_lucius
ENSLAFG00000000867	-	100	89.336	ENSFCAG00000011601	SSB	100	87.678	Felis_catus
ENSLAFG00000000867	-	100	69.031	ENSFALG00000000930	SSB	100	70.449	Ficedula_albicollis
ENSLAFG00000000867	-	100	89.573	ENSFDAG00000000598	SSB	100	86.730	Fukomys_damarensis
ENSLAFG00000000867	-	73	50.318	ENSFHEG00000003268	ssb	95	51.402	Fundulus_heteroclitus
ENSLAFG00000000867	-	97	53.641	ENSGMOG00000002664	ssb	99	52.427	Gadus_morhua
ENSLAFG00000000867	-	100	70.824	ENSGALG00000009677	SSB	100	70.991	Gallus_gallus
ENSLAFG00000000867	-	99	52.494	ENSGAFG00000002749	ssb	100	52.257	Gambusia_affinis
ENSLAFG00000000867	-	99	53.444	ENSGACG00000005107	ssb	100	52.732	Gasterosteus_aculeatus
ENSLAFG00000000867	-	100	73.005	ENSGAGG00000007807	SSB	100	73.882	Gopherus_agassizii
ENSLAFG00000000867	-	100	73.223	ENSGGOG00000024891	-	100	72.512	Gorilla_gorilla
ENSLAFG00000000867	-	64	80.579	ENSGGOG00000023471	-	100	76.033	Gorilla_gorilla
ENSLAFG00000000867	-	99	52.494	ENSHBUG00000006584	ssb	100	52.257	Haplochromis_burtoni
ENSLAFG00000000867	-	100	81.043	ENSHGLG00000005832	-	100	80.569	Heterocephalus_glaber_female
ENSLAFG00000000867	-	100	82.075	ENSHGLG00000004478	-	100	81.368	Heterocephalus_glaber_female
ENSLAFG00000000867	-	100	89.810	ENSHGLG00000017580	-	100	88.626	Heterocephalus_glaber_female
ENSLAFG00000000867	-	56	93.103	ENSHGLG00000011331	-	98	91.026	Heterocephalus_glaber_female
ENSLAFG00000000867	-	100	77.014	ENSHGLG00100008767	-	100	76.540	Heterocephalus_glaber_male
ENSLAFG00000000867	-	100	89.810	ENSHGLG00100003084	-	100	88.626	Heterocephalus_glaber_male
ENSLAFG00000000867	-	98	52.415	ENSHCOG00000019011	ssb	99	52.415	Hippocampus_comes
ENSLAFG00000000867	-	97	54.893	ENSIPUG00000003681	SSB	89	57.143	Ictalurus_punctatus
ENSLAFG00000000867	-	100	89.810	ENSSTOG00000008416	SSB	100	86.967	Ictidomys_tridecemlineatus
ENSLAFG00000000867	-	99	63.962	ENSJJAG00000016250	-	99	62.768	Jaculus_jaculus
ENSLAFG00000000867	-	100	78.302	ENSJJAG00000023158	-	100	77.358	Jaculus_jaculus
ENSLAFG00000000867	-	99	53.682	ENSKMAG00000017317	ssb	100	53.444	Kryptolebias_marmoratus
ENSLAFG00000000867	-	99	52.732	ENSLBEG00000017345	ssb	100	52.494	Labrus_bergylta
ENSLAFG00000000867	-	99	63.915	ENSLACG00000014056	SSB	99	66.194	Latimeria_chalumnae
ENSLAFG00000000867	-	98	63.221	ENSLOCG00000007933	ssb	99	63.462	Lepisosteus_oculatus
ENSLAFG00000000867	-	88	76.408	ENSMFAG00000041478	-	100	75.871	Macaca_fascicularis
ENSLAFG00000000867	-	100	88.863	ENSMFAG00000039066	SSB	100	86.019	Macaca_fascicularis
ENSLAFG00000000867	-	100	88.863	ENSMMUG00000023051	SSB	100	86.019	Macaca_mulatta
ENSLAFG00000000867	-	99	61.667	ENSMMUG00000039889	-	100	60.238	Macaca_mulatta
ENSLAFG00000000867	-	100	74.882	ENSMMUG00000011724	-	97	73.460	Macaca_mulatta
ENSLAFG00000000867	-	88	76.408	ENSMNEG00000034698	-	100	75.871	Macaca_nemestrina
ENSLAFG00000000867	-	100	77.518	ENSMNEG00000028321	SSB	85	98.261	Macaca_nemestrina
ENSLAFG00000000867	-	100	63.270	ENSMLEG00000042644	-	100	59.479	Mandrillus_leucophaeus
ENSLAFG00000000867	-	100	88.863	ENSMLEG00000035717	SSB	88	98.261	Mandrillus_leucophaeus
ENSLAFG00000000867	-	99	55.344	ENSMAMG00000004800	ssb	93	57.069	Mastacembelus_armatus
ENSLAFG00000000867	-	99	52.969	ENSMZEG00005005749	ssb	100	52.732	Maylandia_zebra
ENSLAFG00000000867	-	100	70.824	ENSMGAG00000010328	SSB	99	76.098	Meleagris_gallopavo
ENSLAFG00000000867	-	98	82.126	ENSMICG00000033304	-	95	84.536	Microcebus_murinus
ENSLAFG00000000867	-	99	89.762	ENSMICG00000028252	-	99	86.905	Microcebus_murinus
ENSLAFG00000000867	-	100	52.347	ENSMODG00000019271	-	100	48.131	Monodelphis_domestica
ENSLAFG00000000867	-	100	76.540	ENSMODG00000008227	-	100	75.829	Monodelphis_domestica
ENSLAFG00000000867	-	86	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSLAFG00000000867	-	90	52.756	ENSMALG00000008045	ssb	90	55.612	Monopterus_albus
ENSLAFG00000000867	-	100	77.014	MGP_CAROLIEiJ_G0023629	-	100	90.761	Mus_caroli
ENSLAFG00000000867	-	100	76.303	ENSMUSG00000068882	Ssb	100	90.761	Mus_musculus
ENSLAFG00000000867	-	100	76.066	MGP_PahariEiJ_G0025081	-	100	90.761	Mus_pahari
ENSLAFG00000000867	-	100	76.303	MGP_SPRETEiJ_G0024551	Ssb	100	90.761	Mus_spretus
ENSLAFG00000000867	-	100	88.863	ENSMPUG00000000785	SSB	100	86.019	Mustela_putorius_furo
ENSLAFG00000000867	-	100	86.998	ENSMLUG00000016316	SSB	100	85.816	Myotis_lucifugus
ENSLAFG00000000867	-	99	52.969	ENSNBRG00000012661	ssb	100	52.494	Neolamprologus_brichardi
ENSLAFG00000000867	-	100	89.100	ENSNLEG00000004958	SSB	100	86.256	Nomascus_leucogenys
ENSLAFG00000000867	-	100	64.218	ENSNLEG00000028754	-	100	63.744	Nomascus_leucogenys
ENSLAFG00000000867	-	59	86.290	ENSMEUG00000001650	-	100	86.290	Notamacropus_eugenii
ENSLAFG00000000867	-	53	94.839	ENSOPRG00000008475	-	81	94.839	Ochotona_princeps
ENSLAFG00000000867	-	94	82.532	ENSODEG00000004202	-	100	80.506	Octodon_degus
ENSLAFG00000000867	-	99	52.494	ENSONIG00000008776	ssb	100	52.494	Oreochromis_niloticus
ENSLAFG00000000867	-	100	76.777	ENSOANG00000008543	SSB	100	77.251	Ornithorhynchus_anatinus
ENSLAFG00000000867	-	100	90.758	ENSOCUG00000010396	SSB	100	89.573	Oryctolagus_cuniculus
ENSLAFG00000000867	-	99	54.632	ENSORLG00000017208	ssb	100	53.919	Oryzias_latipes
ENSLAFG00000000867	-	99	54.157	ENSORLG00020022574	ssb	100	53.682	Oryzias_latipes_hni
ENSLAFG00000000867	-	99	54.157	ENSORLG00015016592	ssb	100	53.444	Oryzias_latipes_hsok
ENSLAFG00000000867	-	99	54.632	ENSOMEG00000003193	ssb	100	54.394	Oryzias_melastigma
ENSLAFG00000000867	-	100	87.943	ENSOGAG00000029768	SSB	100	86.288	Otolemur_garnettii
ENSLAFG00000000867	-	100	88.152	ENSOARG00000002906	SSB	100	86.730	Ovis_aries
ENSLAFG00000000867	-	100	88.471	ENSPPAG00000042673	SSB	100	85.647	Pan_paniscus
ENSLAFG00000000867	-	97	68.613	ENSPPAG00000006189	-	93	70.976	Pan_paniscus
ENSLAFG00000000867	-	100	72.275	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSLAFG00000000867	-	100	89.336	ENSPPRG00000006599	SSB	100	87.678	Panthera_pardus
ENSLAFG00000000867	-	100	89.100	ENSPTIG00000011021	SSB	97	88.863	Panthera_tigris_altaica
ENSLAFG00000000867	-	100	68.720	ENSPTRG00000042880	-	100	66.588	Pan_troglodytes
ENSLAFG00000000867	-	100	88.471	ENSPTRG00000012620	SSB	100	85.647	Pan_troglodytes
ENSLAFG00000000867	-	100	88.863	ENSPANG00000007440	SSB	100	86.019	Papio_anubis
ENSLAFG00000000867	-	100	62.796	ENSPANG00000034126	-	100	59.953	Papio_anubis
ENSLAFG00000000867	-	98	60.964	ENSPANG00000031877	-	95	61.446	Papio_anubis
ENSLAFG00000000867	-	99	59.286	ENSPKIG00000019325	ssb	99	59.762	Paramormyrops_kingsleyae
ENSLAFG00000000867	-	100	70.892	ENSPSIG00000002265	SSB	93	71.765	Pelodiscus_sinensis
ENSLAFG00000000867	-	86	50.137	ENSPMGG00000020075	ssb	91	52.342	Periophthalmus_magnuspinnatus
ENSLAFG00000000867	-	78	51.212	ENSPMAG00000002982	ssb	89	47.132	Petromyzon_marinus
ENSLAFG00000000867	-	100	77.488	ENSPCIG00000028591	-	100	77.014	Phascolarctos_cinereus
ENSLAFG00000000867	-	99	53.919	ENSPFOG00000009650	ssb	100	53.444	Poecilia_formosa
ENSLAFG00000000867	-	99	53.682	ENSPLAG00000020498	ssb	100	53.207	Poecilia_latipinna
ENSLAFG00000000867	-	99	53.207	ENSPMEG00000001051	ssb	100	52.969	Poecilia_mexicana
ENSLAFG00000000867	-	94	53.266	ENSPREG00000003708	ssb	99	54.020	Poecilia_reticulata
ENSLAFG00000000867	-	100	89.100	ENSPPYG00000012919	SSB	100	86.256	Pongo_abelii
ENSLAFG00000000867	-	95	88.500	ENSPCAG00000010276	SSB	100	86.750	Procavia_capensis
ENSLAFG00000000867	-	100	78.436	ENSPCOG00000023189	-	100	77.014	Propithecus_coquereli
ENSLAFG00000000867	-	100	86.019	ENSPCOG00000015741	-	100	83.412	Propithecus_coquereli
ENSLAFG00000000867	-	88	88.378	ENSPVAG00000006615	SSB	100	86.486	Pteropus_vampyrus
ENSLAFG00000000867	-	99	52.969	ENSPNYG00000006444	ssb	100	52.732	Pundamilia_nyererei
ENSLAFG00000000867	-	98	53.081	ENSPNAG00000011708	ssb	90	55.556	Pygocentrus_nattereri
ENSLAFG00000000867	-	100	77.014	ENSRNOG00000007998	Ssb	100	76.066	Rattus_norvegicus
ENSLAFG00000000867	-	100	74.408	ENSRNOG00000011606	AABR07061825.1	92	75.773	Rattus_norvegicus
ENSLAFG00000000867	-	94	73.485	ENSRBIG00000041232	-	98	72.222	Rhinopithecus_bieti
ENSLAFG00000000867	-	89	80.475	ENSRBIG00000041608	-	98	77.836	Rhinopithecus_bieti
ENSLAFG00000000867	-	100	73.302	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSLAFG00000000867	-	100	64.303	ENSRBIG00000029918	-	100	62.648	Rhinopithecus_bieti
ENSLAFG00000000867	-	100	73.522	ENSRROG00000007149	-	100	71.868	Rhinopithecus_roxellana
ENSLAFG00000000867	-	100	89.100	ENSRROG00000040346	SSB	100	87.678	Rhinopithecus_roxellana
ENSLAFG00000000867	-	89	84.697	ENSRROG00000034102	-	98	78.313	Rhinopithecus_roxellana
ENSLAFG00000000867	-	98	74.818	ENSRROG00000031684	-	100	73.366	Rhinopithecus_roxellana
ENSLAFG00000000867	-	100	89.100	ENSSBOG00000027204	SSB	100	86.256	Saimiri_boliviensis_boliviensis
ENSLAFG00000000867	-	100	76.540	ENSSHAG00000018062	SSB	100	76.777	Sarcophilus_harrisii
ENSLAFG00000000867	-	99	60.849	ENSSFOG00015000550	ssb	100	62.353	Scleropages_formosus
ENSLAFG00000000867	-	98	51.202	ENSSMAG00000013885	ssb	99	54.522	Scophthalmus_maximus
ENSLAFG00000000867	-	99	53.919	ENSSDUG00000020117	ssb	100	54.157	Seriola_dumerili
ENSLAFG00000000867	-	99	51.667	ENSSLDG00000002525	ssb	100	51.905	Seriola_lalandi_dorsalis
ENSLAFG00000000867	-	95	79.250	ENSSARG00000007747	SSB	100	76.500	Sorex_araneus
ENSLAFG00000000867	-	100	70.283	ENSSPUG00000012112	SSB	100	70.118	Sphenodon_punctatus
ENSLAFG00000000867	-	99	52.732	ENSSPAG00000005696	ssb	98	55.216	Stegastes_partitus
ENSLAFG00000000867	-	98	72.771	ENSSSCG00000015938	SSB	94	73.804	Sus_scrofa
ENSLAFG00000000867	-	100	68.235	ENSTGUG00000007942	SSB	100	69.647	Taeniopygia_guttata
ENSLAFG00000000867	-	99	54.976	ENSTRUG00000017839	ssb	93	55.670	Takifugu_rubripes
ENSLAFG00000000867	-	91	55.729	ENSTNIG00000000915	ssb	100	55.325	Tetraodon_nigroviridis
ENSLAFG00000000867	-	83	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSLAFG00000000867	-	100	88.389	ENSTTRG00000002152	SSB	100	86.730	Tursiops_truncatus
ENSLAFG00000000867	-	93	90.076	ENSUAMG00000027833	SSB	99	89.822	Ursus_americanus
ENSLAFG00000000867	-	100	89.336	ENSUMAG00000013907	SSB	100	89.100	Ursus_maritimus
ENSLAFG00000000867	-	100	87.915	ENSVPAG00000007183	SSB	100	86.019	Vicugna_pacos
ENSLAFG00000000867	-	100	88.389	ENSVVUG00000016573	SSB	78	86.730	Vulpes_vulpes
ENSLAFG00000000867	-	100	56.081	ENSXETG00000025402	ssb	87	60.567	Xenopus_tropicalis
ENSLAFG00000000867	-	94	51.134	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSLAFG00000000867	-	99	52.732	ENSXMAG00000004888	ssb	100	52.732	Xiphophorus_maculatus