EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000001292 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 23954 bases
Position: chrscaffold_5:99397195-99421148
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001090	zf-C3HC	PF07967.13	2.2e-34	1	1
ENSLAFP00000001090	Rsm1	PF08600.10	7.4e-17	1	2
ENSLAFP00000001090	Rsm1	PF08600.10	7.4e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000001293	ZC3HC1-201	1515	-	ENSLAFP00000001090	504 (aa)	-	G3SNB9

Gene Model

Click here to download ENSLAFG00000001292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000001292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000001292	ZC3HC1	99	90.099	ENSG00000091732	ZC3HC1	99	90.099	Homo_sapiens
ENSLAFG00000001292	ZC3HC1	95	44.689	ENSAPOG00000009078	zc3hc1	95	44.088	Acanthochromis_polyacanthus
ENSLAFG00000001292	ZC3HC1	100	88.340	ENSAMEG00000005425	ZC3HC1	100	88.340	Ailuropoda_melanoleuca
ENSLAFG00000001292	ZC3HC1	95	41.916	ENSACIG00000019513	zc3hc1	95	41.352	Amphilophus_citrinellus
ENSLAFG00000001292	ZC3HC1	95	45.328	ENSAOCG00000024310	zc3hc1	95	44.732	Amphiprion_ocellaris
ENSLAFG00000001292	ZC3HC1	95	45.328	ENSAPEG00000004907	zc3hc1	95	44.732	Amphiprion_percula
ENSLAFG00000001292	ZC3HC1	82	47.917	ENSATEG00000016898	zc3hc1	86	47.235	Anabas_testudineus
ENSLAFG00000001292	ZC3HC1	88	61.470	ENSAPLG00000003832	ZC3HC1	99	61.247	Anas_platyrhynchos
ENSLAFG00000001292	ZC3HC1	95	61.963	ENSACAG00000001638	ZC3HC1	95	61.963	Anolis_carolinensis
ENSLAFG00000001292	ZC3HC1	100	88.142	ENSANAG00000022213	ZC3HC1	100	89.826	Aotus_nancymaae
ENSLAFG00000001292	ZC3HC1	86	44.273	ENSACLG00000025033	zc3hc1	94	43.612	Astatotilapia_calliptera
ENSLAFG00000001292	ZC3HC1	94	43.711	ENSAMXG00000036792	zc3hc1	97	43.621	Astyanax_mexicanus
ENSLAFG00000001292	ZC3HC1	100	86.957	ENSBTAG00000011247	ZC3HC1	100	86.957	Bos_taurus
ENSLAFG00000001292	ZC3HC1	100	88.735	ENSCJAG00000010536	ZC3HC1	100	89.244	Callithrix_jacchus
ENSLAFG00000001292	ZC3HC1	100	89.152	ENSCAFG00000001499	-	99	89.152	Canis_familiaris
ENSLAFG00000001292	ZC3HC1	100	89.130	ENSCAFG00000031850	-	100	89.130	Canis_familiaris
ENSLAFG00000001292	ZC3HC1	100	89.130	ENSCAFG00000028735	-	100	89.130	Canis_familiaris
ENSLAFG00000001292	ZC3HC1	100	89.130	ENSCAFG00000029401	-	99	89.130	Canis_familiaris
ENSLAFG00000001292	ZC3HC1	100	88.933	ENSCAFG00020006829	-	100	88.933	Canis_lupus_dingo
ENSLAFG00000001292	ZC3HC1	100	87.945	ENSCAFG00020023333	-	100	87.945	Canis_lupus_dingo
ENSLAFG00000001292	ZC3HC1	100	80.040	ENSCHIG00000014103	ZC3HC1	100	80.040	Capra_hircus
ENSLAFG00000001292	ZC3HC1	100	86.561	ENSTSYG00000002843	ZC3HC1	100	86.561	Carlito_syrichta
ENSLAFG00000001292	ZC3HC1	90	62.581	ENSCAPG00000016300	ZC3HC1	94	76.735	Cavia_aperea
ENSLAFG00000001292	ZC3HC1	100	83.202	ENSCPOG00000014034	ZC3HC1	100	82.609	Cavia_porcellus
ENSLAFG00000001292	ZC3HC1	100	72.134	ENSCCAG00000020384	ZC3HC1	100	88.106	Cebus_capucinus
ENSLAFG00000001292	ZC3HC1	100	90.119	ENSCATG00000023130	ZC3HC1	100	90.119	Cercocebus_atys
ENSLAFG00000001292	ZC3HC1	100	62.055	ENSCLAG00000008260	ZC3HC1	100	60.750	Chinchilla_lanigera
ENSLAFG00000001292	ZC3HC1	73	89.130	ENSCSAG00000009881	ZC3HC1	97	89.130	Chlorocebus_sabaeus
ENSLAFG00000001292	ZC3HC1	90	88.132	ENSCHOG00000011846	ZC3HC1	99	88.132	Choloepus_hoffmanni
ENSLAFG00000001292	ZC3HC1	96	67.480	ENSCPBG00000017519	ZC3HC1	100	66.078	Chrysemys_picta_bellii
ENSLAFG00000001292	ZC3HC1	100	89.723	ENSCANG00000029091	ZC3HC1	100	89.723	Colobus_angolensis_palliatus
ENSLAFG00000001292	ZC3HC1	100	83.597	ENSCGRG00001018805	Zc3hc1	100	83.597	Cricetulus_griseus_chok1gshd
ENSLAFG00000001292	ZC3HC1	100	82.411	ENSCGRG00000017114	Zc3hc1	100	82.411	Cricetulus_griseus_crigri
ENSLAFG00000001292	ZC3HC1	96	42.885	ENSCSEG00000009284	zc3hc1	94	42.292	Cynoglossus_semilaevis
ENSLAFG00000001292	ZC3HC1	94	42.285	ENSCVAG00000011566	zc3hc1	94	41.683	Cyprinodon_variegatus
ENSLAFG00000001292	ZC3HC1	95	46.545	ENSDARG00000062651	zc3hc1	97	45.618	Danio_rerio
ENSLAFG00000001292	ZC3HC1	100	86.561	ENSDNOG00000045016	ZC3HC1	100	86.561	Dasypus_novemcinctus
ENSLAFG00000001292	ZC3HC1	100	75.889	ENSDORG00000008697	Zc3hc1	100	75.889	Dipodomys_ordii
ENSLAFG00000001292	ZC3HC1	90	88.816	ENSEASG00005008789	ZC3HC1	97	88.816	Equus_asinus_asinus
ENSLAFG00000001292	ZC3HC1	100	88.363	ENSECAG00000017886	ZC3HC1	100	88.363	Equus_caballus
ENSLAFG00000001292	ZC3HC1	83	80.864	ENSEEUG00000003123	ZC3HC1	84	80.864	Erinaceus_europaeus
ENSLAFG00000001292	ZC3HC1	95	43.539	ENSELUG00000023168	zc3hc1	94	44.622	Esox_lucius
ENSLAFG00000001292	ZC3HC1	100	87.352	ENSFCAG00000010429	ZC3HC1	100	87.352	Felis_catus
ENSLAFG00000001292	ZC3HC1	90	60.426	ENSFALG00000005006	ZC3HC1	100	60.426	Ficedula_albicollis
ENSLAFG00000001292	ZC3HC1	100	86.166	ENSFDAG00000019897	ZC3HC1	100	86.919	Fukomys_damarensis
ENSLAFG00000001292	ZC3HC1	96	41.765	ENSFHEG00000020149	zc3hc1	96	40.828	Fundulus_heteroclitus
ENSLAFG00000001292	ZC3HC1	94	41.818	ENSGMOG00000002914	zc3hc1	95	42.073	Gadus_morhua
ENSLAFG00000001292	ZC3HC1	99	61.310	ENSGALG00000008003	ZC3HC1	99	61.310	Gallus_gallus
ENSLAFG00000001292	ZC3HC1	96	43.000	ENSGAFG00000016095	zc3hc1	96	42.430	Gambusia_affinis
ENSLAFG00000001292	ZC3HC1	94	43.878	ENSGACG00000019706	zc3hc1	95	43.408	Gasterosteus_aculeatus
ENSLAFG00000001292	ZC3HC1	77	68.702	ENSGAGG00000016106	ZC3HC1	100	68.702	Gopherus_agassizii
ENSLAFG00000001292	ZC3HC1	99	89.901	ENSGGOG00000015504	ZC3HC1	99	89.901	Gorilla_gorilla
ENSLAFG00000001292	ZC3HC1	94	42.596	ENSHBUG00000008347	zc3hc1	94	41.988	Haplochromis_burtoni
ENSLAFG00000001292	ZC3HC1	100	86.364	ENSHGLG00000005085	ZC3HC1	100	86.628	Heterocephalus_glaber_female
ENSLAFG00000001292	ZC3HC1	100	86.166	ENSHGLG00100011395	ZC3HC1	100	86.628	Heterocephalus_glaber_male
ENSLAFG00000001292	ZC3HC1	95	42.713	ENSHCOG00000014309	zc3hc1	95	42.828	Hippocampus_comes
ENSLAFG00000001292	ZC3HC1	100	85.375	ENSSTOG00000023599	-	100	85.375	Ictidomys_tridecemlineatus
ENSLAFG00000001292	ZC3HC1	94	44.266	ENSKMAG00000015315	zc3hc1	88	43.260	Kryptolebias_marmoratus
ENSLAFG00000001292	ZC3HC1	95	43.340	ENSLBEG00000017325	zc3hc1	95	42.744	Labrus_bergylta
ENSLAFG00000001292	ZC3HC1	79	54.369	ENSLACG00000013032	ZC3HC1	97	54.369	Latimeria_chalumnae
ENSLAFG00000001292	ZC3HC1	97	50.400	ENSLOCG00000015963	zc3hc1	97	50.499	Lepisosteus_oculatus
ENSLAFG00000001292	ZC3HC1	100	90.119	ENSMFAG00000030176	ZC3HC1	100	90.698	Macaca_fascicularis
ENSLAFG00000001292	ZC3HC1	100	89.328	ENSMMUG00000006155	ZC3HC1	100	89.328	Macaca_mulatta
ENSLAFG00000001292	ZC3HC1	100	90.316	ENSMNEG00000011833	ZC3HC1	100	90.316	Macaca_nemestrina
ENSLAFG00000001292	ZC3HC1	100	90.119	ENSMLEG00000027328	ZC3HC1	100	90.119	Mandrillus_leucophaeus
ENSLAFG00000001292	ZC3HC1	95	44.000	ENSMAMG00000010691	zc3hc1	95	43.426	Mastacembelus_armatus
ENSLAFG00000001292	ZC3HC1	94	42.394	ENSMZEG00005007142	zc3hc1	94	41.785	Maylandia_zebra
ENSLAFG00000001292	ZC3HC1	99	60.236	ENSMGAG00000002977	ZC3HC1	99	61.024	Meleagris_gallopavo
ENSLAFG00000001292	ZC3HC1	81	78.657	ENSMAUG00000017032	Zc3hc1	92	78.657	Mesocricetus_auratus
ENSLAFG00000001292	ZC3HC1	100	88.538	ENSMICG00000009167	ZC3HC1	100	88.538	Microcebus_murinus
ENSLAFG00000001292	ZC3HC1	100	83.004	ENSMOCG00000015239	Zc3hc1	100	83.004	Microtus_ochrogaster
ENSLAFG00000001292	ZC3HC1	87	42.857	ENSMMOG00000002204	zc3hc1	99	42.208	Mola_mola
ENSLAFG00000001292	ZC3HC1	100	62.214	ENSMODG00000014630	ZC3HC1	100	62.786	Monodelphis_domestica
ENSLAFG00000001292	ZC3HC1	94	42.972	ENSMALG00000014447	zc3hc1	95	43.340	Monopterus_albus
ENSLAFG00000001292	ZC3HC1	100	82.213	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	82.213	Mus_caroli
ENSLAFG00000001292	ZC3HC1	100	82.609	ENSMUSG00000039130	Zc3hc1	100	82.609	Mus_musculus
ENSLAFG00000001292	ZC3HC1	100	76.285	MGP_PahariEiJ_G0021941	Zc3hc1	100	76.285	Mus_pahari
ENSLAFG00000001292	ZC3HC1	100	82.806	MGP_SPRETEiJ_G0029183	Zc3hc1	100	82.806	Mus_spretus
ENSLAFG00000001292	ZC3HC1	95	87.552	ENSMPUG00000005297	ZC3HC1	95	87.552	Mustela_putorius_furo
ENSLAFG00000001292	ZC3HC1	100	87.377	ENSMLUG00000000063	-	100	87.377	Myotis_lucifugus
ENSLAFG00000001292	ZC3HC1	67	81.449	ENSMLUG00000029228	-	99	81.449	Myotis_lucifugus
ENSLAFG00000001292	ZC3HC1	100	84.221	ENSNGAG00000019014	Zc3hc1	100	84.221	Nannospalax_galili
ENSLAFG00000001292	ZC3HC1	94	42.480	ENSNBRG00000004577	zc3hc1	94	41.870	Neolamprologus_brichardi
ENSLAFG00000001292	ZC3HC1	99	89.109	ENSNLEG00000012698	ZC3HC1	99	89.535	Nomascus_leucogenys
ENSLAFG00000001292	ZC3HC1	98	78.831	ENSMEUG00000011023	ZC3HC1	98	78.672	Notamacropus_eugenii
ENSLAFG00000001292	ZC3HC1	65	81.154	ENSOPRG00000007867	-	67	81.154	Ochotona_princeps
ENSLAFG00000001292	ZC3HC1	100	82.213	ENSODEG00000014604	ZC3HC1	100	82.016	Octodon_degus
ENSLAFG00000001292	ZC3HC1	94	43.205	ENSONIG00000011644	zc3hc1	94	42.596	Oreochromis_niloticus
ENSLAFG00000001292	ZC3HC1	90	68.750	ENSOANG00000011460	ZC3HC1	100	68.750	Ornithorhynchus_anatinus
ENSLAFG00000001292	ZC3HC1	100	84.221	ENSOCUG00000017137	ZC3HC1	100	84.221	Oryctolagus_cuniculus
ENSLAFG00000001292	ZC3HC1	95	43.636	ENSORLG00000014409	zc3hc1	94	43.636	Oryzias_latipes
ENSLAFG00000001292	ZC3HC1	95	44.040	ENSORLG00020015874	zc3hc1	94	44.040	Oryzias_latipes_hni
ENSLAFG00000001292	ZC3HC1	95	44.040	ENSORLG00015014641	zc3hc1	94	44.040	Oryzias_latipes_hsok
ENSLAFG00000001292	ZC3HC1	95	45.679	ENSOMEG00000000215	zc3hc1	95	45.621	Oryzias_melastigma
ENSLAFG00000001292	ZC3HC1	95	45.679	ENSOMEG00000020604	zc3hc1	95	45.621	Oryzias_melastigma
ENSLAFG00000001292	ZC3HC1	100	82.806	ENSOGAG00000026193	ZC3HC1	100	82.806	Otolemur_garnettii
ENSLAFG00000001292	ZC3HC1	100	87.377	ENSOARG00000004907	ZC3HC1	99	87.377	Ovis_aries
ENSLAFG00000001292	ZC3HC1	99	90.099	ENSPPAG00000043172	ZC3HC1	99	90.099	Pan_paniscus
ENSLAFG00000001292	ZC3HC1	100	86.561	ENSPPRG00000001004	ZC3HC1	100	86.561	Panthera_pardus
ENSLAFG00000001292	ZC3HC1	100	87.154	ENSPTIG00000007823	ZC3HC1	100	87.154	Panthera_tigris_altaica
ENSLAFG00000001292	ZC3HC1	99	89.901	ENSPTRG00000019685	ZC3HC1	99	89.901	Pan_troglodytes
ENSLAFG00000001292	ZC3HC1	100	88.933	ENSPANG00000014229	ZC3HC1	100	88.933	Papio_anubis
ENSLAFG00000001292	ZC3HC1	95	47.216	ENSPKIG00000007172	zc3hc1	95	46.502	Paramormyrops_kingsleyae
ENSLAFG00000001292	ZC3HC1	93	61.667	ENSPSIG00000016646	ZC3HC1	100	59.109	Pelodiscus_sinensis
ENSLAFG00000001292	ZC3HC1	94	41.566	ENSPMGG00000003548	zc3hc1	95	41.566	Periophthalmus_magnuspinnatus
ENSLAFG00000001292	ZC3HC1	100	83.202	ENSPEMG00000000514	Zc3hc1	100	83.794	Peromyscus_maniculatus_bairdii
ENSLAFG00000001292	ZC3HC1	97	76.220	ENSPCIG00000020619	ZC3HC1	100	78.517	Phascolarctos_cinereus
ENSLAFG00000001292	ZC3HC1	96	42.400	ENSPFOG00000003466	zc3hc1	96	42.032	Poecilia_formosa
ENSLAFG00000001292	ZC3HC1	96	42.400	ENSPLAG00000022211	zc3hc1	96	42.032	Poecilia_latipinna
ENSLAFG00000001292	ZC3HC1	96	42.715	ENSPMEG00000001458	zc3hc1	96	42.346	Poecilia_mexicana
ENSLAFG00000001292	ZC3HC1	96	43.200	ENSPREG00000004004	zc3hc1	96	42.629	Poecilia_reticulata
ENSLAFG00000001292	ZC3HC1	99	81.854	ENSPPYG00000017998	ZC3HC1	99	81.854	Pongo_abelii
ENSLAFG00000001292	ZC3HC1	92	87.879	ENSPCAG00000001182	ZC3HC1	100	87.879	Procavia_capensis
ENSLAFG00000001292	ZC3HC1	100	88.933	ENSPCOG00000017354	ZC3HC1	100	89.535	Propithecus_coquereli
ENSLAFG00000001292	ZC3HC1	100	82.213	ENSPVAG00000003195	ZC3HC1	100	82.411	Pteropus_vampyrus
ENSLAFG00000001292	ZC3HC1	94	42.394	ENSPNYG00000020692	zc3hc1	94	41.785	Pundamilia_nyererei
ENSLAFG00000001292	ZC3HC1	93	43.361	ENSPNAG00000020746	zc3hc1	95	43.776	Pygocentrus_nattereri
ENSLAFG00000001292	ZC3HC1	100	82.213	ENSRNOG00000010154	Zc3hc1	100	82.213	Rattus_norvegicus
ENSLAFG00000001292	ZC3HC1	90	89.934	ENSRBIG00000029409	ZC3HC1	100	89.934	Rhinopithecus_bieti
ENSLAFG00000001292	ZC3HC1	100	89.723	ENSRROG00000041831	ZC3HC1	100	89.723	Rhinopithecus_roxellana
ENSLAFG00000001292	ZC3HC1	88	88.406	ENSSBOG00000032787	ZC3HC1	100	88.406	Saimiri_boliviensis_boliviensis
ENSLAFG00000001292	ZC3HC1	92	77.730	ENSSHAG00000002529	ZC3HC1	100	77.730	Sarcophilus_harrisii
ENSLAFG00000001292	ZC3HC1	95	47.862	ENSSFOG00015003667	zc3hc1	91	47.358	Scleropages_formosus
ENSLAFG00000001292	ZC3HC1	95	44.289	ENSSMAG00000000647	zc3hc1	86	44.289	Scophthalmus_maximus
ENSLAFG00000001292	ZC3HC1	95	44.556	ENSSDUG00000004241	zc3hc1	93	43.976	Seriola_dumerili
ENSLAFG00000001292	ZC3HC1	95	44.444	ENSSLDG00000025056	zc3hc1	93	43.863	Seriola_lalandi_dorsalis
ENSLAFG00000001292	ZC3HC1	99	77.822	ENSSARG00000012013	ZC3HC1	99	77.822	Sorex_araneus
ENSLAFG00000001292	ZC3HC1	85	58.851	ENSSPUG00000000778	ZC3HC1	85	58.851	Sphenodon_punctatus
ENSLAFG00000001292	ZC3HC1	95	45.473	ENSSPAG00000020041	zc3hc1	95	44.890	Stegastes_partitus
ENSLAFG00000001292	ZC3HC1	100	86.759	ENSSSCG00000016565	ZC3HC1	100	86.759	Sus_scrofa
ENSLAFG00000001292	ZC3HC1	95	42.540	ENSTRUG00000020077	zc3hc1	99	41.040	Takifugu_rubripes
ENSLAFG00000001292	ZC3HC1	95	41.331	ENSTNIG00000007585	zc3hc1	99	40.404	Tetraodon_nigroviridis
ENSLAFG00000001292	ZC3HC1	89	88.372	ENSTBEG00000005216	ZC3HC1	90	88.372	Tupaia_belangeri
ENSLAFG00000001292	ZC3HC1	95	87.810	ENSTTRG00000008458	ZC3HC1	100	87.810	Tursiops_truncatus
ENSLAFG00000001292	ZC3HC1	100	87.945	ENSUAMG00000020249	ZC3HC1	100	87.945	Ursus_americanus
ENSLAFG00000001292	ZC3HC1	100	87.747	ENSUMAG00000009268	ZC3HC1	100	87.747	Ursus_maritimus
ENSLAFG00000001292	ZC3HC1	78	87.500	ENSVPAG00000010846	ZC3HC1	77	87.500	Vicugna_pacos
ENSLAFG00000001292	ZC3HC1	96	88.223	ENSVVUG00000012386	ZC3HC1	99	88.223	Vulpes_vulpes
ENSLAFG00000001292	ZC3HC1	91	52.331	ENSXETG00000033900	zc3hc1	95	52.331	Xenopus_tropicalis
ENSLAFG00000001292	ZC3HC1	96	42.400	ENSXCOG00000013570	zc3hc1	96	41.833	Xiphophorus_couchianus
ENSLAFG00000001292	ZC3HC1	90	43.763	ENSXMAG00000010979	zc3hc1	98	43.158	Xiphophorus_maculatus