EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000001473 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 29737 bases
Position: chrscaffold_11:44014240-44043976
Accession: 100660191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001228	RTC	PF01137.21	5.4e-88	1	1
ENSLAFP00000001228	RTC_insert	PF05189.13	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000001473	RTCA-201	1101	-	ENSLAFP00000001228	366 (aa)	XP_003409571	G3SNL8

Gene Model

Click here to download ENSLAFG00000001473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000001473's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000001473	RTCA	100	93.443	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSLAFG00000001473	RTCA	100	70.492	ENSAPOG00000001345	rtca	99	70.492	Acanthochromis_polyacanthus
ENSLAFG00000001473	RTCA	73	93.680	ENSAMEG00000008855	RTCA	100	93.680	Ailuropoda_melanoleuca
ENSLAFG00000001473	RTCA	99	71.191	ENSACIG00000019643	rtca	99	71.191	Amphilophus_citrinellus
ENSLAFG00000001473	RTCA	100	70.492	ENSAOCG00000014979	rtca	99	70.492	Amphiprion_ocellaris
ENSLAFG00000001473	RTCA	100	70.492	ENSAPEG00000006945	rtca	99	70.492	Amphiprion_percula
ENSLAFG00000001473	RTCA	96	70.655	ENSATEG00000006315	rtca	96	70.655	Anabas_testudineus
ENSLAFG00000001473	RTCA	96	79.096	ENSAPLG00000015430	RTCA	100	79.096	Anas_platyrhynchos
ENSLAFG00000001473	RTCA	100	92.623	ENSANAG00000025446	RTCA	100	92.623	Aotus_nancymaae
ENSLAFG00000001473	RTCA	100	69.672	ENSACLG00000020770	rtca	99	69.672	Astatotilapia_calliptera
ENSLAFG00000001473	RTCA	100	71.038	ENSAMXG00000043271	rtca	100	71.038	Astyanax_mexicanus
ENSLAFG00000001473	RTCA	100	94.536	ENSBTAG00000006321	RTCA	100	94.536	Bos_taurus
ENSLAFG00000001473	RTCA	100	92.623	ENSCJAG00000003398	RTCA	100	92.623	Callithrix_jacchus
ENSLAFG00000001473	RTCA	100	94.536	ENSCAFG00000020010	RTCA	68	94.536	Canis_familiaris
ENSLAFG00000001473	RTCA	100	94.536	ENSCAFG00020011528	RTCA	57	94.536	Canis_lupus_dingo
ENSLAFG00000001473	RTCA	100	94.262	ENSCHIG00000018937	RTCA	100	94.262	Capra_hircus
ENSLAFG00000001473	RTCA	100	92.623	ENSTSYG00000011305	RTCA	100	92.623	Carlito_syrichta
ENSLAFG00000001473	RTCA	100	92.350	ENSCCAG00000021844	RTCA	100	92.350	Cebus_capucinus
ENSLAFG00000001473	RTCA	100	89.974	ENSCATG00000019364	RTCA	100	92.880	Cercocebus_atys
ENSLAFG00000001473	RTCA	87	93.375	ENSCLAG00000006125	RTCA	100	93.375	Chinchilla_lanigera
ENSLAFG00000001473	RTCA	100	93.443	ENSCSAG00000001509	RTCA	100	93.443	Chlorocebus_sabaeus
ENSLAFG00000001473	RTCA	100	94.809	ENSCHOG00000005211	RTCA	100	94.809	Choloepus_hoffmanni
ENSLAFG00000001473	RTCA	100	84.426	ENSCPBG00000026658	RTCA	100	84.426	Chrysemys_picta_bellii
ENSLAFG00000001473	RTCA	98	55.307	ENSCING00000007875	-	98	55.307	Ciona_intestinalis
ENSLAFG00000001473	RTCA	98	54.318	ENSCSAVG00000007269	-	98	54.318	Ciona_savignyi
ENSLAFG00000001473	RTCA	100	93.169	ENSCANG00000040106	RTCA	100	93.169	Colobus_angolensis_palliatus
ENSLAFG00000001473	RTCA	73	90.706	ENSCGRG00001013163	Rtca	85	90.706	Cricetulus_griseus_chok1gshd
ENSLAFG00000001473	RTCA	98	68.333	ENSCSEG00000000530	rtca	96	68.333	Cynoglossus_semilaevis
ENSLAFG00000001473	RTCA	99	58.424	ENSCVAG00000021809	rtca	99	58.424	Cyprinodon_variegatus
ENSLAFG00000001473	RTCA	100	72.404	ENSDARG00000002215	rtca	100	72.404	Danio_rerio
ENSLAFG00000001473	RTCA	100	94.809	ENSDNOG00000000456	RTCA	100	94.809	Dasypus_novemcinctus
ENSLAFG00000001473	RTCA	100	91.803	ENSDORG00000005448	Rtca	100	91.803	Dipodomys_ordii
ENSLAFG00000001473	RTCA	99	38.398	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSLAFG00000001473	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSLAFG00000001473	RTCA	100	93.716	ENSEASG00005015926	RTCA	100	93.716	Equus_asinus_asinus
ENSLAFG00000001473	RTCA	100	93.716	ENSECAG00000019831	RTCA	100	93.716	Equus_caballus
ENSLAFG00000001473	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSLAFG00000001473	RTCA	99	71.191	ENSELUG00000003741	rtca	99	71.191	Esox_lucius
ENSLAFG00000001473	RTCA	100	94.536	ENSFCAG00000024460	RTCA	100	94.536	Felis_catus
ENSLAFG00000001473	RTCA	93	81.176	ENSFALG00000002443	RTCA	91	81.176	Ficedula_albicollis
ENSLAFG00000001473	RTCA	98	72.928	ENSFDAG00000016084	-	100	72.928	Fukomys_damarensis
ENSLAFG00000001473	RTCA	100	94.262	ENSFDAG00000012070	-	100	94.262	Fukomys_damarensis
ENSLAFG00000001473	RTCA	55	72.500	ENSFHEG00000002868	rtca	90	70.192	Fundulus_heteroclitus
ENSLAFG00000001473	RTCA	100	68.033	ENSGMOG00000013264	rtca	100	68.033	Gadus_morhua
ENSLAFG00000001473	RTCA	100	82.514	ENSGALG00000005277	RTCA	100	82.514	Gallus_gallus
ENSLAFG00000001473	RTCA	100	70.765	ENSGAFG00000011853	rtca	99	70.765	Gambusia_affinis
ENSLAFG00000001473	RTCA	100	68.306	ENSGACG00000013497	rtca	100	68.306	Gasterosteus_aculeatus
ENSLAFG00000001473	RTCA	80	84.983	ENSGAGG00000023306	RTCA	100	84.983	Gopherus_agassizii
ENSLAFG00000001473	RTCA	100	93.443	ENSGGOG00000009546	-	100	93.443	Gorilla_gorilla
ENSLAFG00000001473	RTCA	100	92.623	ENSGGOG00000044018	-	100	92.623	Gorilla_gorilla
ENSLAFG00000001473	RTCA	100	69.399	ENSHBUG00000002114	rtca	99	69.399	Haplochromis_burtoni
ENSLAFG00000001473	RTCA	100	92.896	ENSHGLG00000002617	RTCA	100	92.896	Heterocephalus_glaber_female
ENSLAFG00000001473	RTCA	100	92.896	ENSHGLG00100006056	RTCA	100	92.896	Heterocephalus_glaber_male
ENSLAFG00000001473	RTCA	100	63.934	ENSHCOG00000020628	rtca	89	63.934	Hippocampus_comes
ENSLAFG00000001473	RTCA	100	71.311	ENSIPUG00000024803	rtca	100	71.311	Ictalurus_punctatus
ENSLAFG00000001473	RTCA	100	87.158	ENSSTOG00000013528	-	100	87.158	Ictidomys_tridecemlineatus
ENSLAFG00000001473	RTCA	100	82.016	ENSSTOG00000033099	-	100	82.016	Ictidomys_tridecemlineatus
ENSLAFG00000001473	RTCA	100	67.213	ENSJJAG00000016178	Rtca	100	67.213	Jaculus_jaculus
ENSLAFG00000001473	RTCA	99	71.468	ENSKMAG00000006651	rtca	98	71.468	Kryptolebias_marmoratus
ENSLAFG00000001473	RTCA	99	68.698	ENSLBEG00000028971	rtca	99	68.698	Labrus_bergylta
ENSLAFG00000001473	RTCA	88	68.224	ENSLBEG00000002448	-	99	68.224	Labrus_bergylta
ENSLAFG00000001473	RTCA	100	77.322	ENSLACG00000013666	RTCA	100	77.322	Latimeria_chalumnae
ENSLAFG00000001473	RTCA	100	72.404	ENSLOCG00000000093	rtca	99	72.404	Lepisosteus_oculatus
ENSLAFG00000001473	RTCA	100	93.443	ENSMFAG00000034132	RTCA	100	93.443	Macaca_fascicularis
ENSLAFG00000001473	RTCA	100	92.896	ENSMMUG00000019105	RTCA	100	92.896	Macaca_mulatta
ENSLAFG00000001473	RTCA	84	93.204	ENSMNEG00000037163	RTCA	100	93.204	Macaca_nemestrina
ENSLAFG00000001473	RTCA	100	76.776	ENSMLEG00000042151	RTCA	100	76.776	Mandrillus_leucophaeus
ENSLAFG00000001473	RTCA	100	71.858	ENSMAMG00000016536	rtca	100	71.858	Mastacembelus_armatus
ENSLAFG00000001473	RTCA	100	69.672	ENSMZEG00005017945	rtca	99	69.672	Maylandia_zebra
ENSLAFG00000001473	RTCA	87	80.251	ENSMGAG00000006892	RTCA	99	80.251	Meleagris_gallopavo
ENSLAFG00000001473	RTCA	100	90.984	ENSMAUG00000008488	Rtca	100	90.984	Mesocricetus_auratus
ENSLAFG00000001473	RTCA	84	94.498	ENSMICG00000008643	RTCA	100	94.498	Microcebus_murinus
ENSLAFG00000001473	RTCA	100	91.257	ENSMOCG00000016660	Rtca	100	91.257	Microtus_ochrogaster
ENSLAFG00000001473	RTCA	84	70.874	ENSMMOG00000007750	rtca	100	70.874	Mola_mola
ENSLAFG00000001473	RTCA	100	90.437	ENSMODG00000003557	RTCA	100	90.437	Monodelphis_domestica
ENSLAFG00000001473	RTCA	100	71.585	ENSMALG00000020844	rtca	100	71.585	Monopterus_albus
ENSLAFG00000001473	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSLAFG00000001473	RTCA	100	91.257	ENSMUSG00000000339	Rtca	100	91.257	Mus_musculus
ENSLAFG00000001473	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSLAFG00000001473	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	90.984	Mus_spretus
ENSLAFG00000001473	RTCA	100	94.536	ENSMPUG00000012119	RTCA	100	94.536	Mustela_putorius_furo
ENSLAFG00000001473	RTCA	100	86.376	ENSMLUG00000009922	RTCA	100	86.376	Myotis_lucifugus
ENSLAFG00000001473	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSLAFG00000001473	RTCA	100	69.672	ENSNBRG00000003062	rtca	99	69.672	Neolamprologus_brichardi
ENSLAFG00000001473	RTCA	100	93.716	ENSNLEG00000031426	RTCA	100	93.716	Nomascus_leucogenys
ENSLAFG00000001473	RTCA	58	91.463	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSLAFG00000001473	RTCA	73	86.617	ENSOPRG00000012092	RTCA	71	86.617	Ochotona_princeps
ENSLAFG00000001473	RTCA	95	94.540	ENSODEG00000006990	RTCA	96	94.587	Octodon_degus
ENSLAFG00000001473	RTCA	100	69.945	ENSONIG00000007753	rtca	99	69.945	Oreochromis_niloticus
ENSLAFG00000001473	RTCA	87	88.644	ENSOANG00000012055	RTCA	98	88.644	Ornithorhynchus_anatinus
ENSLAFG00000001473	RTCA	100	95.082	ENSOCUG00000014247	RTCA	100	95.082	Oryctolagus_cuniculus
ENSLAFG00000001473	RTCA	100	69.672	ENSORLG00000013605	rtca	100	69.672	Oryzias_latipes
ENSLAFG00000001473	RTCA	100	69.672	ENSORLG00020001904	rtca	100	69.672	Oryzias_latipes_hni
ENSLAFG00000001473	RTCA	100	69.672	ENSORLG00015021064	rtca	100	69.672	Oryzias_latipes_hsok
ENSLAFG00000001473	RTCA	100	70.492	ENSOMEG00000000756	rtca	100	70.492	Oryzias_melastigma
ENSLAFG00000001473	RTCA	100	85.792	ENSOGAG00000005627	RTCA	100	85.792	Otolemur_garnettii
ENSLAFG00000001473	RTCA	87	93.711	ENSOARG00000018122	RTCA	100	93.711	Ovis_aries
ENSLAFG00000001473	RTCA	100	89.710	ENSPPAG00000035119	RTCA	100	92.880	Pan_paniscus
ENSLAFG00000001473	RTCA	100	94.262	ENSPPRG00000000350	RTCA	100	94.262	Panthera_pardus
ENSLAFG00000001473	RTCA	100	94.262	ENSPTIG00000012816	RTCA	100	94.262	Panthera_tigris_altaica
ENSLAFG00000001473	RTCA	100	89.710	ENSPTRG00000001004	RTCA	100	92.880	Pan_troglodytes
ENSLAFG00000001473	RTCA	100	93.443	ENSPANG00000000346	RTCA	100	93.443	Papio_anubis
ENSLAFG00000001473	RTCA	100	72.678	ENSPKIG00000001653	rtca	100	72.678	Paramormyrops_kingsleyae
ENSLAFG00000001473	RTCA	100	85.246	ENSPSIG00000011408	RTCA	100	85.246	Pelodiscus_sinensis
ENSLAFG00000001473	RTCA	100	91.530	ENSPEMG00000018582	Rtca	100	91.530	Peromyscus_maniculatus_bairdii
ENSLAFG00000001473	RTCA	99	58.242	ENSPMAG00000009110	rtca	99	58.242	Petromyzon_marinus
ENSLAFG00000001473	RTCA	100	90.164	ENSPCIG00000007684	RTCA	100	90.164	Phascolarctos_cinereus
ENSLAFG00000001473	RTCA	100	71.117	ENSPFOG00000004824	rtca	100	71.117	Poecilia_formosa
ENSLAFG00000001473	RTCA	100	71.311	ENSPLAG00000011753	rtca	99	71.311	Poecilia_latipinna
ENSLAFG00000001473	RTCA	100	71.311	ENSPMEG00000020469	rtca	99	71.311	Poecilia_mexicana
ENSLAFG00000001473	RTCA	100	72.131	ENSPREG00000001365	rtca	99	72.131	Poecilia_reticulata
ENSLAFG00000001473	RTCA	100	93.443	ENSPPYG00000001115	RTCA	100	93.443	Pongo_abelii
ENSLAFG00000001473	RTCA	100	93.443	ENSPCAG00000005076	RTCA	100	93.443	Procavia_capensis
ENSLAFG00000001473	RTCA	100	95.082	ENSPCOG00000005603	RTCA	100	95.082	Propithecus_coquereli
ENSLAFG00000001473	RTCA	100	89.446	ENSPVAG00000009478	RTCA	100	89.446	Pteropus_vampyrus
ENSLAFG00000001473	RTCA	100	69.672	ENSPNYG00000004722	rtca	99	69.672	Pundamilia_nyererei
ENSLAFG00000001473	RTCA	100	71.038	ENSPNAG00000022270	rtca	100	71.038	Pygocentrus_nattereri
ENSLAFG00000001473	RTCA	100	90.710	ENSRNOG00000014575	Rtca	100	90.710	Rattus_norvegicus
ENSLAFG00000001473	RTCA	100	89.446	ENSRBIG00000041180	RTCA	100	92.233	Rhinopithecus_bieti
ENSLAFG00000001473	RTCA	100	92.623	ENSRROG00000024929	RTCA	100	92.623	Rhinopithecus_roxellana
ENSLAFG00000001473	RTCA	100	92.077	ENSSBOG00000028626	RTCA	100	92.077	Saimiri_boliviensis_boliviensis
ENSLAFG00000001473	RTCA	100	91.257	ENSSHAG00000001758	RTCA	100	91.257	Sarcophilus_harrisii
ENSLAFG00000001473	RTCA	98	68.333	ENSSMAG00000014680	rtca	97	68.333	Scophthalmus_maximus
ENSLAFG00000001473	RTCA	98	70.278	ENSSDUG00000015585	rtca	97	70.278	Seriola_dumerili
ENSLAFG00000001473	RTCA	96	70.655	ENSSLDG00000018985	rtca	95	70.655	Seriola_lalandi_dorsalis
ENSLAFG00000001473	RTCA	87	85.489	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSLAFG00000001473	RTCA	100	69.399	ENSSPAG00000011938	rtca	99	69.399	Stegastes_partitus
ENSLAFG00000001473	RTCA	100	94.536	ENSSSCG00000006865	RTCA	100	94.536	Sus_scrofa
ENSLAFG00000001473	RTCA	100	81.967	ENSTGUG00000005154	RTCA	100	81.967	Taeniopygia_guttata
ENSLAFG00000001473	RTCA	100	70.219	ENSTRUG00000008799	rtca	100	70.219	Takifugu_rubripes
ENSLAFG00000001473	RTCA	100	71.585	ENSTNIG00000004725	rtca	100	71.585	Tetraodon_nigroviridis
ENSLAFG00000001473	RTCA	59	80.000	ENSTBEG00000000943	RTCA	82	63.866	Tupaia_belangeri
ENSLAFG00000001473	RTCA	100	90.501	ENSTTRG00000015327	RTCA	100	90.501	Tursiops_truncatus
ENSLAFG00000001473	RTCA	94	93.003	ENSUAMG00000017265	RTCA	96	93.003	Ursus_americanus
ENSLAFG00000001473	RTCA	100	93.989	ENSUMAG00000007881	RTCA	100	93.989	Ursus_maritimus
ENSLAFG00000001473	RTCA	87	83.912	ENSVPAG00000001039	RTCA	84	83.912	Vicugna_pacos
ENSLAFG00000001473	RTCA	100	94.262	ENSVVUG00000022041	RTCA	68	94.262	Vulpes_vulpes
ENSLAFG00000001473	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSLAFG00000001473	RTCA	100	62.022	ENSXCOG00000008002	rtca	100	62.022	Xiphophorus_couchianus
ENSLAFG00000001473	RTCA	100	71.038	ENSXMAG00000005482	rtca	99	71.038	Xiphophorus_maculatus