EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002082 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 20694 bases
Position: chrscaffold_2:104224122-104244815
Accession: 100675436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001741	RtcB	PF01139.17	9.8e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002082	RTCB-201	1518	-	ENSLAFP00000001741	505 (aa)	XP_003405364	G3SPS8

Gene Model

Click here to download ENSLAFG00000002082's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002082's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002082	RTCB	100	98.812	ENSG00000100220	RTCB	100	98.812	Homo_sapiens
ENSLAFG00000002082	RTCB	100	94.257	ENSAPOG00000006040	rtcb	100	94.257	Acanthochromis_polyacanthus
ENSLAFG00000002082	RTCB	100	98.614	ENSAMEG00000016152	RTCB	100	98.614	Ailuropoda_melanoleuca
ENSLAFG00000002082	RTCB	100	89.703	ENSACIG00000009083	rtcb	100	89.703	Amphilophus_citrinellus
ENSLAFG00000002082	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.217	Amphiprion_ocellaris
ENSLAFG00000002082	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSLAFG00000002082	RTCB	96	89.528	ENSAPEG00000024653	rtcb	100	89.528	Amphiprion_percula
ENSLAFG00000002082	RTCB	100	94.653	ENSATEG00000000618	rtcb	100	94.653	Anabas_testudineus
ENSLAFG00000002082	RTCB	100	93.256	ENSACAG00000014817	RTCB	100	93.256	Anolis_carolinensis
ENSLAFG00000002082	RTCB	72	94.444	ENSANAG00000023724	-	100	62.451	Aotus_nancymaae
ENSLAFG00000002082	RTCB	100	83.168	ENSANAG00000018191	-	91	83.168	Aotus_nancymaae
ENSLAFG00000002082	RTCB	100	92.673	ENSACLG00000008367	rtcb	100	93.478	Astatotilapia_calliptera
ENSLAFG00000002082	RTCB	100	94.059	ENSAMXG00000042320	rtcb	100	94.059	Astyanax_mexicanus
ENSLAFG00000002082	RTCB	100	98.416	ENSBTAG00000011070	RTCB	100	98.416	Bos_taurus
ENSLAFG00000002082	RTCB	100	72.871	WBGene00008877	rtcb-1	100	72.871	Caenorhabditis_elegans
ENSLAFG00000002082	RTCB	100	98.812	ENSCJAG00000006128	RTCB	100	98.812	Callithrix_jacchus
ENSLAFG00000002082	RTCB	100	98.614	ENSCAFG00000001785	RTCB	100	98.614	Canis_familiaris
ENSLAFG00000002082	RTCB	100	94.257	ENSCAFG00000010789	-	100	94.257	Canis_familiaris
ENSLAFG00000002082	RTCB	87	95.000	ENSCAFG00020018953	-	99	95.000	Canis_lupus_dingo
ENSLAFG00000002082	RTCB	100	98.614	ENSCAFG00020004890	-	100	98.614	Canis_lupus_dingo
ENSLAFG00000002082	RTCB	100	98.614	ENSCHIG00000027009	-	100	98.614	Capra_hircus
ENSLAFG00000002082	RTCB	100	99.208	ENSTSYG00000012320	RTCB	100	99.208	Carlito_syrichta
ENSLAFG00000002082	RTCB	94	98.323	ENSCAPG00000011647	RTCB	96	98.323	Cavia_aperea
ENSLAFG00000002082	RTCB	100	98.812	ENSCCAG00000000618	RTCB	100	98.812	Cebus_capucinus
ENSLAFG00000002082	RTCB	100	98.416	ENSCATG00000033424	RTCB	100	98.416	Cercocebus_atys
ENSLAFG00000002082	RTCB	100	98.416	ENSCLAG00000007997	RTCB	100	98.416	Chinchilla_lanigera
ENSLAFG00000002082	RTCB	100	98.614	ENSCSAG00000008351	RTCB	100	98.614	Chlorocebus_sabaeus
ENSLAFG00000002082	RTCB	100	84.554	ENSCHOG00000009123	RTCB	100	84.554	Choloepus_hoffmanni
ENSLAFG00000002082	RTCB	100	96.238	ENSCPBG00000023184	RTCB	100	96.238	Chrysemys_picta_bellii
ENSLAFG00000002082	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSLAFG00000002082	RTCB	100	81.980	ENSCSAVG00000008124	-	99	81.980	Ciona_savignyi
ENSLAFG00000002082	RTCB	100	94.653	ENSCANG00000001891	RTCB	100	94.653	Colobus_angolensis_palliatus
ENSLAFG00000002082	RTCB	100	98.614	ENSCGRG00001011173	Rtcb	100	98.614	Cricetulus_griseus_chok1gshd
ENSLAFG00000002082	RTCB	93	98.726	ENSCGRG00000009587	-	96	98.726	Cricetulus_griseus_crigri
ENSLAFG00000002082	RTCB	100	93.663	ENSCSEG00000003986	rtcb	100	93.663	Cynoglossus_semilaevis
ENSLAFG00000002082	RTCB	82	93.029	ENSCVAG00000000569	rtcb	95	93.029	Cyprinodon_variegatus
ENSLAFG00000002082	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSLAFG00000002082	RTCB	80	96.314	ENSDNOG00000012425	RTCB	99	96.314	Dasypus_novemcinctus
ENSLAFG00000002082	RTCB	100	98.218	ENSDORG00000010855	Rtcb	100	98.218	Dipodomys_ordii
ENSLAFG00000002082	RTCB	99	85.089	FBgn0032781	RtcB	99	85.089	Drosophila_melanogaster
ENSLAFG00000002082	RTCB	100	92.079	ENSETEG00000001988	RTCB	100	92.079	Echinops_telfairi
ENSLAFG00000002082	RTCB	100	85.149	ENSEBUG00000014235	rtcb	100	85.149	Eptatretus_burgeri
ENSLAFG00000002082	RTCB	100	99.010	ENSEASG00005019059	RTCB	100	99.010	Equus_asinus_asinus
ENSLAFG00000002082	RTCB	100	99.010	ENSECAG00000023998	RTCB	100	99.010	Equus_caballus
ENSLAFG00000002082	RTCB	89	89.262	ENSEEUG00000006251	RTCB	100	89.262	Erinaceus_europaeus
ENSLAFG00000002082	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSLAFG00000002082	RTCB	100	98.812	ENSFCAG00000026480	RTCB	100	98.812	Felis_catus
ENSLAFG00000002082	RTCB	100	97.030	ENSFALG00000013334	RTCB	100	97.030	Ficedula_albicollis
ENSLAFG00000002082	RTCB	100	98.614	ENSFDAG00000018150	RTCB	100	98.614	Fukomys_damarensis
ENSLAFG00000002082	RTCB	100	93.861	ENSFHEG00000009595	rtcb	100	93.861	Fundulus_heteroclitus
ENSLAFG00000002082	RTCB	100	91.089	ENSGMOG00000018882	rtcb	100	91.089	Gadus_morhua
ENSLAFG00000002082	RTCB	100	96.832	ENSGALG00000012611	RTCB	100	96.832	Gallus_gallus
ENSLAFG00000002082	RTCB	100	94.059	ENSGAFG00000004198	rtcb	100	94.059	Gambusia_affinis
ENSLAFG00000002082	RTCB	100	93.465	ENSGACG00000000586	rtcb	100	93.465	Gasterosteus_aculeatus
ENSLAFG00000002082	RTCB	93	95.745	ENSGAGG00000019133	RTCB	98	95.745	Gopherus_agassizii
ENSLAFG00000002082	RTCB	100	98.812	ENSGGOG00000011402	RTCB	100	98.812	Gorilla_gorilla
ENSLAFG00000002082	RTCB	100	92.673	ENSHBUG00000020571	rtcb	100	92.673	Haplochromis_burtoni
ENSLAFG00000002082	RTCB	100	98.614	ENSHGLG00000004492	RTCB	100	98.614	Heterocephalus_glaber_female
ENSLAFG00000002082	RTCB	93	69.915	ENSHGLG00000001066	-	99	69.915	Heterocephalus_glaber_female
ENSLAFG00000002082	RTCB	100	98.614	ENSHGLG00100008965	RTCB	100	98.614	Heterocephalus_glaber_male
ENSLAFG00000002082	RTCB	100	91.716	ENSHCOG00000006450	rtcb	100	91.716	Hippocampus_comes
ENSLAFG00000002082	RTCB	100	94.059	ENSIPUG00000015443	rtcb	100	94.059	Ictalurus_punctatus
ENSLAFG00000002082	RTCB	100	98.812	ENSSTOG00000003878	RTCB	100	98.812	Ictidomys_tridecemlineatus
ENSLAFG00000002082	RTCB	100	98.218	ENSJJAG00000010667	Rtcb	100	98.218	Jaculus_jaculus
ENSLAFG00000002082	RTCB	100	93.861	ENSKMAG00000013178	rtcb	100	93.861	Kryptolebias_marmoratus
ENSLAFG00000002082	RTCB	100	93.069	ENSLBEG00000000214	rtcb	100	93.069	Labrus_bergylta
ENSLAFG00000002082	RTCB	100	94.059	ENSLBEG00000010566	RTCB	100	94.059	Labrus_bergylta
ENSLAFG00000002082	RTCB	100	95.050	ENSLACG00000013033	RTCB	100	95.050	Latimeria_chalumnae
ENSLAFG00000002082	RTCB	100	94.257	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSLAFG00000002082	RTCB	100	98.614	ENSMFAG00000034419	RTCB	100	98.614	Macaca_fascicularis
ENSLAFG00000002082	RTCB	100	98.614	ENSMMUG00000006720	RTCB	100	98.614	Macaca_mulatta
ENSLAFG00000002082	RTCB	100	98.614	ENSMNEG00000040669	RTCB	100	98.614	Macaca_nemestrina
ENSLAFG00000002082	RTCB	100	98.416	ENSMLEG00000040505	RTCB	100	98.416	Mandrillus_leucophaeus
ENSLAFG00000002082	RTCB	100	93.861	ENSMAMG00000020676	rtcb	100	93.861	Mastacembelus_armatus
ENSLAFG00000002082	RTCB	100	92.673	ENSMZEG00005018942	rtcb	100	92.673	Maylandia_zebra
ENSLAFG00000002082	RTCB	100	96.450	ENSMGAG00000012805	RTCB	100	96.450	Meleagris_gallopavo
ENSLAFG00000002082	RTCB	60	99.115	ENSMAUG00000008301	Rtcb	100	99.115	Mesocricetus_auratus
ENSLAFG00000002082	RTCB	100	79.208	ENSMICG00000036677	-	100	79.208	Microcebus_murinus
ENSLAFG00000002082	RTCB	100	99.010	ENSMICG00000013303	-	100	99.010	Microcebus_murinus
ENSLAFG00000002082	RTCB	100	98.614	ENSMOCG00000002440	Rtcb	100	98.614	Microtus_ochrogaster
ENSLAFG00000002082	RTCB	100	94.653	ENSMMOG00000005987	rtcb	100	94.653	Mola_mola
ENSLAFG00000002082	RTCB	100	97.624	ENSMODG00000001414	RTCB	100	97.624	Monodelphis_domestica
ENSLAFG00000002082	RTCB	100	94.059	ENSMALG00000007603	rtcb	100	94.059	Monopterus_albus
ENSLAFG00000002082	RTCB	100	99.010	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.010	Mus_caroli
ENSLAFG00000002082	RTCB	100	99.010	ENSMUSG00000001783	Rtcb	100	99.010	Mus_musculus
ENSLAFG00000002082	RTCB	100	99.010	MGP_PahariEiJ_G0031396	Rtcb	100	99.010	Mus_pahari
ENSLAFG00000002082	RTCB	100	99.010	MGP_SPRETEiJ_G0016507	Rtcb	100	99.010	Mus_spretus
ENSLAFG00000002082	RTCB	100	98.614	ENSMPUG00000012285	RTCB	100	98.614	Mustela_putorius_furo
ENSLAFG00000002082	RTCB	100	96.252	ENSMLUG00000007803	RTCB	100	96.252	Myotis_lucifugus
ENSLAFG00000002082	RTCB	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSLAFG00000002082	RTCB	100	92.871	ENSNBRG00000017202	rtcb	100	92.871	Neolamprologus_brichardi
ENSLAFG00000002082	RTCB	100	98.812	ENSNLEG00000004960	RTCB	100	98.812	Nomascus_leucogenys
ENSLAFG00000002082	RTCB	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSLAFG00000002082	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSLAFG00000002082	RTCB	82	99.057	ENSODEG00000013033	-	100	99.057	Octodon_degus
ENSLAFG00000002082	RTCB	100	64.554	ENSODEG00000005042	-	100	64.554	Octodon_degus
ENSLAFG00000002082	RTCB	100	93.861	ENSONIG00000007474	rtcb	100	93.861	Oreochromis_niloticus
ENSLAFG00000002082	RTCB	100	97.624	ENSOANG00000005524	RTCB	100	97.624	Ornithorhynchus_anatinus
ENSLAFG00000002082	RTCB	93	98.723	ENSOCUG00000008270	RTCB	96	98.723	Oryctolagus_cuniculus
ENSLAFG00000002082	RTCB	100	93.069	ENSORLG00000020093	rtcb	100	93.069	Oryzias_latipes
ENSLAFG00000002082	RTCB	100	93.069	ENSORLG00020003706	rtcb	100	93.069	Oryzias_latipes_hni
ENSLAFG00000002082	RTCB	100	93.267	ENSORLG00015002968	rtcb	100	93.267	Oryzias_latipes_hsok
ENSLAFG00000002082	RTCB	100	92.871	ENSOMEG00000021278	rtcb	100	92.871	Oryzias_melastigma
ENSLAFG00000002082	RTCB	100	98.416	ENSOGAG00000001425	RTCB	100	98.416	Otolemur_garnettii
ENSLAFG00000002082	RTCB	100	98.614	ENSOARG00000018008	RTCB	100	98.614	Ovis_aries
ENSLAFG00000002082	RTCB	100	98.812	ENSPPAG00000028667	RTCB	100	98.812	Pan_paniscus
ENSLAFG00000002082	RTCB	100	98.812	ENSPPRG00000004038	RTCB	100	98.812	Panthera_pardus
ENSLAFG00000002082	RTCB	94	95.579	ENSPTIG00000020499	RTCB	97	95.579	Panthera_tigris_altaica
ENSLAFG00000002082	RTCB	100	98.812	ENSPTRG00000014287	RTCB	100	98.812	Pan_troglodytes
ENSLAFG00000002082	RTCB	100	98.614	ENSPANG00000016035	RTCB	100	98.614	Papio_anubis
ENSLAFG00000002082	RTCB	100	92.475	ENSPKIG00000001881	rtcb	100	92.475	Paramormyrops_kingsleyae
ENSLAFG00000002082	RTCB	91	97.174	ENSPSIG00000011690	RTCB	100	97.174	Pelodiscus_sinensis
ENSLAFG00000002082	RTCB	100	94.059	ENSPMGG00000016672	rtcb	100	94.059	Periophthalmus_magnuspinnatus
ENSLAFG00000002082	RTCB	100	99.010	ENSPEMG00000019548	Rtcb	100	99.010	Peromyscus_maniculatus_bairdii
ENSLAFG00000002082	RTCB	100	90.891	ENSPMAG00000005657	rtcb	100	90.891	Petromyzon_marinus
ENSLAFG00000002082	RTCB	100	98.020	ENSPCIG00000009467	RTCB	100	98.020	Phascolarctos_cinereus
ENSLAFG00000002082	RTCB	100	94.455	ENSPFOG00000003058	rtcb	100	94.455	Poecilia_formosa
ENSLAFG00000002082	RTCB	100	94.257	ENSPLAG00000017663	rtcb	100	94.257	Poecilia_latipinna
ENSLAFG00000002082	RTCB	100	94.455	ENSPMEG00000006227	rtcb	100	94.455	Poecilia_mexicana
ENSLAFG00000002082	RTCB	100	94.257	ENSPREG00000018467	rtcb	100	94.257	Poecilia_reticulata
ENSLAFG00000002082	RTCB	100	98.812	ENSPPYG00000011752	RTCB	100	98.812	Pongo_abelii
ENSLAFG00000002082	RTCB	93	82.415	ENSPCAG00000013641	RTCB	100	82.415	Procavia_capensis
ENSLAFG00000002082	RTCB	100	98.812	ENSPCOG00000017243	RTCB	100	98.812	Propithecus_coquereli
ENSLAFG00000002082	RTCB	93	98.298	ENSPVAG00000002380	RTCB	100	98.298	Pteropus_vampyrus
ENSLAFG00000002082	RTCB	100	92.673	ENSPNYG00000022760	rtcb	100	92.673	Pundamilia_nyererei
ENSLAFG00000002082	RTCB	100	94.653	ENSPNAG00000009209	rtcb	100	94.653	Pygocentrus_nattereri
ENSLAFG00000002082	RTCB	100	99.010	ENSRNOG00000004813	Rtcb	100	99.010	Rattus_norvegicus
ENSLAFG00000002082	RTCB	100	89.526	ENSRBIG00000042090	RTCB	100	89.526	Rhinopithecus_bieti
ENSLAFG00000002082	RTCB	100	94.059	ENSSBOG00000020085	-	100	94.059	Saimiri_boliviensis_boliviensis
ENSLAFG00000002082	RTCB	94	98.734	ENSSHAG00000016277	RTCB	100	98.734	Sarcophilus_harrisii
ENSLAFG00000002082	RTCB	100	93.267	ENSSFOG00015011572	RTCB	100	93.267	Scleropages_formosus
ENSLAFG00000002082	RTCB	100	92.673	ENSSFOG00015000763	rtcb	100	92.673	Scleropages_formosus
ENSLAFG00000002082	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSLAFG00000002082	RTCB	100	93.267	ENSSDUG00000012605	rtcb	100	93.267	Seriola_dumerili
ENSLAFG00000002082	RTCB	100	93.267	ENSSLDG00000019458	rtcb	100	93.267	Seriola_lalandi_dorsalis
ENSLAFG00000002082	RTCB	66	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSLAFG00000002082	RTCB	100	95.248	ENSSPUG00000012814	RTCB	100	95.248	Sphenodon_punctatus
ENSLAFG00000002082	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSLAFG00000002082	RTCB	100	98.812	ENSSSCG00000000158	RTCB	100	98.812	Sus_scrofa
ENSLAFG00000002082	RTCB	100	97.030	ENSTGUG00000010947	RTCB	99	97.030	Taeniopygia_guttata
ENSLAFG00000002082	RTCB	91	94.783	ENSTRUG00000009880	rtcb	100	94.783	Takifugu_rubripes
ENSLAFG00000002082	RTCB	100	92.871	ENSTNIG00000002484	rtcb	100	92.871	Tetraodon_nigroviridis
ENSLAFG00000002082	RTCB	100	85.545	ENSTBEG00000004418	RTCB	100	85.545	Tupaia_belangeri
ENSLAFG00000002082	RTCB	93	98.085	ENSTTRG00000006417	RTCB	100	98.085	Tursiops_truncatus
ENSLAFG00000002082	RTCB	100	98.614	ENSUAMG00000022792	RTCB	100	98.614	Ursus_americanus
ENSLAFG00000002082	RTCB	100	98.614	ENSUMAG00000017225	RTCB	100	98.614	Ursus_maritimus
ENSLAFG00000002082	RTCB	100	99.010	ENSVPAG00000005375	RTCB	100	99.010	Vicugna_pacos
ENSLAFG00000002082	RTCB	100	98.614	ENSVVUG00000023408	RTCB	100	98.771	Vulpes_vulpes
ENSLAFG00000002082	RTCB	100	94.059	ENSXETG00000011523	rtcb	100	94.059	Xenopus_tropicalis
ENSLAFG00000002082	RTCB	100	94.455	ENSXMAG00000002855	rtcb	100	94.455	Xiphophorus_maculatus