EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002115 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1920 bases
Position: chrscaffold_53:15131578-15133497
Accession: 100676450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001770	PseudoU_synth_2	PF00849.22	2.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002115	RPUSD1-201	909	-	ENSLAFP00000001770	302 (aa)	XP_003417835	G3SPV3

Gene Model

Click here to download ENSLAFG00000002115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002115	RPUSD1	100	80.128	ENSG00000007376	RPUSD1	100	88.690	Homo_sapiens
ENSLAFG00000002115	RPUSD1	98	56.291	ENSAPOG00000022221	rpusd1	98	55.960	Acanthochromis_polyacanthus
ENSLAFG00000002115	RPUSD1	100	83.113	ENSAMEG00000007461	RPUSD1	100	83.113	Ailuropoda_melanoleuca
ENSLAFG00000002115	RPUSD1	98	56.209	ENSACIG00000015863	rpusd1	98	56.209	Amphilophus_citrinellus
ENSLAFG00000002115	RPUSD1	98	55.410	ENSAOCG00000021975	rpusd1	95	55.410	Amphiprion_ocellaris
ENSLAFG00000002115	RPUSD1	98	55.738	ENSAPEG00000001316	rpusd1	95	55.738	Amphiprion_percula
ENSLAFG00000002115	RPUSD1	79	66.946	ENSATEG00000002984	rpusd1	98	56.721	Anabas_testudineus
ENSLAFG00000002115	RPUSD1	78	58.436	ENSAPLG00000012316	RPUSD1	99	58.436	Anas_platyrhynchos
ENSLAFG00000002115	RPUSD1	99	69.079	ENSACAG00000008953	RPUSD1	100	69.079	Anolis_carolinensis
ENSLAFG00000002115	RPUSD1	100	81.090	ENSANAG00000024709	RPUSD1	100	81.090	Aotus_nancymaae
ENSLAFG00000002115	RPUSD1	84	64.032	ENSACLG00000013692	rpusd1	98	56.678	Astatotilapia_calliptera
ENSLAFG00000002115	RPUSD1	99	57.667	ENSAMXG00000019802	rpusd1	100	57.667	Astyanax_mexicanus
ENSLAFG00000002115	RPUSD1	100	81.494	ENSBTAG00000000179	RPUSD1	100	81.818	Bos_taurus
ENSLAFG00000002115	RPUSD1	100	81.090	ENSCJAG00000012253	RPUSD1	100	81.410	Callithrix_jacchus
ENSLAFG00000002115	RPUSD1	99	85.382	ENSCAFG00000019614	RPUSD1	99	85.382	Canis_familiaris
ENSLAFG00000002115	RPUSD1	99	85.382	ENSCAFG00020008891	RPUSD1	99	85.382	Canis_lupus_dingo
ENSLAFG00000002115	RPUSD1	100	82.143	ENSCHIG00000012872	RPUSD1	100	82.468	Capra_hircus
ENSLAFG00000002115	RPUSD1	100	82.119	ENSTSYG00000036934	RPUSD1	100	82.119	Carlito_syrichta
ENSLAFG00000002115	RPUSD1	100	81.046	ENSCAPG00000014219	RPUSD1	100	81.046	Cavia_aperea
ENSLAFG00000002115	RPUSD1	100	81.046	ENSCPOG00000034604	RPUSD1	100	81.046	Cavia_porcellus
ENSLAFG00000002115	RPUSD1	100	81.410	ENSCCAG00000034385	RPUSD1	100	81.410	Cebus_capucinus
ENSLAFG00000002115	RPUSD1	100	81.731	ENSCATG00000042983	RPUSD1	100	81.731	Cercocebus_atys
ENSLAFG00000002115	RPUSD1	100	79.739	ENSCLAG00000013966	RPUSD1	100	79.739	Chinchilla_lanigera
ENSLAFG00000002115	RPUSD1	100	82.372	ENSCSAG00000012121	RPUSD1	100	82.372	Chlorocebus_sabaeus
ENSLAFG00000002115	RPUSD1	99	63.430	ENSCPBG00000021101	RPUSD1	99	63.430	Chrysemys_picta_bellii
ENSLAFG00000002115	RPUSD1	90	86.081	ENSCANG00000028576	RPUSD1	97	86.081	Colobus_angolensis_palliatus
ENSLAFG00000002115	RPUSD1	100	80.198	ENSCGRG00001014253	Rpusd1	100	80.198	Cricetulus_griseus_chok1gshd
ENSLAFG00000002115	RPUSD1	100	80.198	ENSCGRG00000017995	Rpusd1	100	80.198	Cricetulus_griseus_crigri
ENSLAFG00000002115	RPUSD1	99	54.849	ENSCSEG00000018512	rpusd1	100	54.849	Cynoglossus_semilaevis
ENSLAFG00000002115	RPUSD1	98	55.667	ENSCVAG00000022746	rpusd1	98	55.667	Cyprinodon_variegatus
ENSLAFG00000002115	RPUSD1	99	60.667	ENSDARG00000060192	rpusd1	100	60.667	Danio_rerio
ENSLAFG00000002115	RPUSD1	100	82.428	ENSDNOG00000003721	RPUSD1	100	83.766	Dasypus_novemcinctus
ENSLAFG00000002115	RPUSD1	100	82.838	ENSDORG00000026656	Rpusd1	100	83.498	Dipodomys_ordii
ENSLAFG00000002115	RPUSD1	99	47.452	ENSEBUG00000008767	rpusd1	94	47.452	Eptatretus_burgeri
ENSLAFG00000002115	RPUSD1	99	81.270	ENSEASG00005018421	RPUSD1	75	81.587	Equus_asinus_asinus
ENSLAFG00000002115	RPUSD1	84	59.055	ENSELUG00000014307	rpusd1	88	52.459	Esox_lucius
ENSLAFG00000002115	RPUSD1	100	81.126	ENSFCAG00000010359	RPUSD1	100	81.126	Felis_catus
ENSLAFG00000002115	RPUSD1	99	64.590	ENSFALG00000003211	RPUSD1	100	64.590	Ficedula_albicollis
ENSLAFG00000002115	RPUSD1	100	80.065	ENSFDAG00000013398	RPUSD1	100	80.065	Fukomys_damarensis
ENSLAFG00000002115	RPUSD1	98	55.116	ENSFHEG00000004736	rpusd1	98	55.116	Fundulus_heteroclitus
ENSLAFG00000002115	RPUSD1	84	62.451	ENSGMOG00000010756	rpusd1	98	55.592	Gadus_morhua
ENSLAFG00000002115	RPUSD1	99	64.918	ENSGALG00000005315	RPUSD1	100	64.918	Gallus_gallus
ENSLAFG00000002115	RPUSD1	98	56.333	ENSGAFG00000009886	rpusd1	98	56.333	Gambusia_affinis
ENSLAFG00000002115	RPUSD1	83	62.948	ENSGACG00000014276	rpusd1	97	55.446	Gasterosteus_aculeatus
ENSLAFG00000002115	RPUSD1	99	63.754	ENSGAGG00000004181	RPUSD1	99	63.754	Gopherus_agassizii
ENSLAFG00000002115	RPUSD1	100	79.808	ENSGGOG00000013997	RPUSD1	100	79.808	Gorilla_gorilla
ENSLAFG00000002115	RPUSD1	84	63.636	ENSHBUG00000023728	rpusd1	98	56.352	Haplochromis_burtoni
ENSLAFG00000002115	RPUSD1	100	80.719	ENSHGLG00000002595	RPUSD1	100	81.046	Heterocephalus_glaber_female
ENSLAFG00000002115	RPUSD1	100	80.719	ENSHGLG00100014303	RPUSD1	100	81.046	Heterocephalus_glaber_male
ENSLAFG00000002115	RPUSD1	98	57.576	ENSHCOG00000002390	rpusd1	99	57.576	Hippocampus_comes
ENSLAFG00000002115	RPUSD1	99	59.539	ENSIPUG00000001570	rpusd1	99	59.539	Ictalurus_punctatus
ENSLAFG00000002115	RPUSD1	100	81.046	ENSSTOG00000004276	RPUSD1	100	81.046	Ictidomys_tridecemlineatus
ENSLAFG00000002115	RPUSD1	100	82.680	ENSJJAG00000015696	Rpusd1	100	82.680	Jaculus_jaculus
ENSLAFG00000002115	RPUSD1	98	56.667	ENSKMAG00000017287	rpusd1	98	56.667	Kryptolebias_marmoratus
ENSLAFG00000002115	RPUSD1	98	54.754	ENSLBEG00000013354	RPUSD1	98	55.082	Labrus_bergylta
ENSLAFG00000002115	RPUSD1	98	54.754	ENSLBEG00000022502	rpusd1	98	55.082	Labrus_bergylta
ENSLAFG00000002115	RPUSD1	99	61.513	ENSLACG00000008869	RPUSD1	99	61.513	Latimeria_chalumnae
ENSLAFG00000002115	RPUSD1	72	72.222	ENSLOCG00000005682	rpusd1	99	72.222	Lepisosteus_oculatus
ENSLAFG00000002115	RPUSD1	100	82.051	ENSMFAG00000003961	RPUSD1	100	82.051	Macaca_fascicularis
ENSLAFG00000002115	RPUSD1	100	82.051	ENSMMUG00000000842	RPUSD1	100	82.051	Macaca_mulatta
ENSLAFG00000002115	RPUSD1	100	82.051	ENSMNEG00000042712	RPUSD1	100	82.051	Macaca_nemestrina
ENSLAFG00000002115	RPUSD1	100	82.051	ENSMLEG00000030591	RPUSD1	100	82.051	Mandrillus_leucophaeus
ENSLAFG00000002115	RPUSD1	84	64.032	ENSMAMG00000004735	rpusd1	98	56.209	Mastacembelus_armatus
ENSLAFG00000002115	RPUSD1	84	64.032	ENSMZEG00005003214	rpusd1	98	56.678	Maylandia_zebra
ENSLAFG00000002115	RPUSD1	97	64.333	ENSMGAG00000005447	RPUSD1	99	64.333	Meleagris_gallopavo
ENSLAFG00000002115	RPUSD1	87	75.940	ENSMAUG00000019998	Rpusd1	100	75.940	Mesocricetus_auratus
ENSLAFG00000002115	RPUSD1	100	81.107	ENSMICG00000017561	RPUSD1	100	81.433	Microcebus_murinus
ENSLAFG00000002115	RPUSD1	100	82.353	ENSMOCG00000014082	Rpusd1	100	82.353	Microtus_ochrogaster
ENSLAFG00000002115	RPUSD1	81	63.525	ENSMMOG00000012569	rpusd1	99	56.419	Mola_mola
ENSLAFG00000002115	RPUSD1	100	67.961	ENSMODG00000016882	RPUSD1	100	68.285	Monodelphis_domestica
ENSLAFG00000002115	RPUSD1	98	55.882	ENSMALG00000017818	rpusd1	98	55.229	Monopterus_albus
ENSLAFG00000002115	RPUSD1	100	82.680	MGP_CAROLIEiJ_G0021244	Rpusd1	100	82.680	Mus_caroli
ENSLAFG00000002115	RPUSD1	100	83.660	ENSMUSG00000041199	Rpusd1	100	83.660	Mus_musculus
ENSLAFG00000002115	RPUSD1	100	81.169	MGP_PahariEiJ_G0023562	Rpusd1	99	81.967	Mus_pahari
ENSLAFG00000002115	RPUSD1	100	83.660	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.660	Mus_spretus
ENSLAFG00000002115	RPUSD1	100	80.795	ENSMPUG00000015897	RPUSD1	100	80.795	Mustela_putorius_furo
ENSLAFG00000002115	RPUSD1	100	80.952	ENSMLUG00000001089	RPUSD1	100	80.952	Myotis_lucifugus
ENSLAFG00000002115	RPUSD1	100	82.353	ENSNGAG00000003595	Rpusd1	100	82.353	Nannospalax_galili
ENSLAFG00000002115	RPUSD1	98	49.679	ENSNBRG00000006457	rpusd1	98	57.288	Neolamprologus_brichardi
ENSLAFG00000002115	RPUSD1	55	73.714	ENSNLEG00000008424	-	100	73.714	Nomascus_leucogenys
ENSLAFG00000002115	RPUSD1	100	70.066	ENSMEUG00000016049	RPUSD1	100	70.066	Notamacropus_eugenii
ENSLAFG00000002115	RPUSD1	99	75.000	ENSOPRG00000008340	RPUSD1	99	75.000	Ochotona_princeps
ENSLAFG00000002115	RPUSD1	100	78.431	ENSODEG00000016945	RPUSD1	100	78.431	Octodon_degus
ENSLAFG00000002115	RPUSD1	84	63.241	ENSONIG00000015672	rpusd1	99	56.026	Oreochromis_niloticus
ENSLAFG00000002115	RPUSD1	99	56.954	ENSORLG00000013009	rpusd1	99	56.954	Oryzias_latipes
ENSLAFG00000002115	RPUSD1	99	56.623	ENSORLG00020010382	rpusd1	99	56.623	Oryzias_latipes_hni
ENSLAFG00000002115	RPUSD1	99	55.960	ENSORLG00015021354	rpusd1	99	55.960	Oryzias_latipes_hsok
ENSLAFG00000002115	RPUSD1	98	56.902	ENSOMEG00000021426	rpusd1	98	56.902	Oryzias_melastigma
ENSLAFG00000002115	RPUSD1	100	81.731	ENSOGAG00000003795	RPUSD1	100	82.372	Otolemur_garnettii
ENSLAFG00000002115	RPUSD1	100	81.494	ENSOARG00000014254	RPUSD1	100	81.818	Ovis_aries
ENSLAFG00000002115	RPUSD1	100	79.808	ENSPPAG00000034797	RPUSD1	100	79.808	Pan_paniscus
ENSLAFG00000002115	RPUSD1	100	80.795	ENSPPRG00000012389	RPUSD1	100	80.795	Panthera_pardus
ENSLAFG00000002115	RPUSD1	100	80.464	ENSPTIG00000008545	RPUSD1	92	80.464	Panthera_tigris_altaica
ENSLAFG00000002115	RPUSD1	100	79.808	ENSPTRG00000007565	RPUSD1	100	79.808	Pan_troglodytes
ENSLAFG00000002115	RPUSD1	100	81.410	ENSPANG00000024401	RPUSD1	100	81.410	Papio_anubis
ENSLAFG00000002115	RPUSD1	99	59.344	ENSPKIG00000018890	rpusd1	91	59.344	Paramormyrops_kingsleyae
ENSLAFG00000002115	RPUSD1	99	65.147	ENSPSIG00000013945	RPUSD1	100	65.147	Pelodiscus_sinensis
ENSLAFG00000002115	RPUSD1	98	57.627	ENSPMGG00000014950	rpusd1	98	57.627	Periophthalmus_magnuspinnatus
ENSLAFG00000002115	RPUSD1	100	80.719	ENSPEMG00000000497	Rpusd1	100	80.719	Peromyscus_maniculatus_bairdii
ENSLAFG00000002115	RPUSD1	98	50.658	ENSPMAG00000001563	rpusd1	99	50.658	Petromyzon_marinus
ENSLAFG00000002115	RPUSD1	100	69.508	ENSPCIG00000021216	-	94	69.508	Phascolarctos_cinereus
ENSLAFG00000002115	RPUSD1	98	57.191	ENSPFOG00000007946	rpusd1	98	57.191	Poecilia_formosa
ENSLAFG00000002115	RPUSD1	98	57.191	ENSPLAG00000011925	rpusd1	98	57.191	Poecilia_latipinna
ENSLAFG00000002115	RPUSD1	98	56.522	ENSPMEG00000002910	rpusd1	98	56.522	Poecilia_mexicana
ENSLAFG00000002115	RPUSD1	98	56.667	ENSPREG00000019851	rpusd1	98	56.667	Poecilia_reticulata
ENSLAFG00000002115	RPUSD1	100	75.828	ENSPCAG00000002258	RPUSD1	100	75.828	Procavia_capensis
ENSLAFG00000002115	RPUSD1	100	81.090	ENSPCOG00000022582	RPUSD1	100	81.090	Propithecus_coquereli
ENSLAFG00000002115	RPUSD1	100	77.885	ENSPVAG00000013104	RPUSD1	100	78.205	Pteropus_vampyrus
ENSLAFG00000002115	RPUSD1	98	56.610	ENSPNYG00000024076	rpusd1	98	57.288	Pundamilia_nyererei
ENSLAFG00000002115	RPUSD1	99	58.667	ENSPNAG00000013806	rpusd1	100	58.667	Pygocentrus_nattereri
ENSLAFG00000002115	RPUSD1	100	83.333	ENSRNOG00000023639	Rpusd1	100	83.333	Rattus_norvegicus
ENSLAFG00000002115	RPUSD1	100	81.410	ENSRBIG00000030238	RPUSD1	100	81.410	Rhinopithecus_bieti
ENSLAFG00000002115	RPUSD1	100	81.410	ENSRROG00000036663	RPUSD1	100	81.410	Rhinopithecus_roxellana
ENSLAFG00000002115	RPUSD1	100	83.444	ENSSBOG00000033063	RPUSD1	100	83.444	Saimiri_boliviensis_boliviensis
ENSLAFG00000002115	RPUSD1	100	68.525	ENSSHAG00000013500	RPUSD1	100	68.525	Sarcophilus_harrisii
ENSLAFG00000002115	RPUSD1	99	60.797	ENSSFOG00015014394	rpusd1	99	60.797	Scleropages_formosus
ENSLAFG00000002115	RPUSD1	98	55.082	ENSSMAG00000008045	rpusd1	91	55.082	Scophthalmus_maximus
ENSLAFG00000002115	RPUSD1	84	65.613	ENSSDUG00000001829	rpusd1	95	57.705	Seriola_dumerili
ENSLAFG00000002115	RPUSD1	84	65.613	ENSSLDG00000020853	rpusd1	95	57.705	Seriola_lalandi_dorsalis
ENSLAFG00000002115	RPUSD1	55	86.826	ENSSARG00000011187	-	100	86.826	Sorex_araneus
ENSLAFG00000002115	RPUSD1	62	53.125	ENSSPUG00000005119	-	100	53.125	Sphenodon_punctatus
ENSLAFG00000002115	RPUSD1	98	56.066	ENSSPAG00000012708	rpusd1	98	56.066	Stegastes_partitus
ENSLAFG00000002115	RPUSD1	100	80.449	ENSSSCG00000008000	RPUSD1	99	85.214	Sus_scrofa
ENSLAFG00000002115	RPUSD1	84	72.157	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSLAFG00000002115	RPUSD1	98	55.229	ENSTRUG00000003041	rpusd1	98	55.229	Takifugu_rubripes
ENSLAFG00000002115	RPUSD1	98	54.054	ENSTNIG00000002660	rpusd1	99	54.054	Tetraodon_nigroviridis
ENSLAFG00000002115	RPUSD1	99	80.707	ENSTTRG00000010167	RPUSD1	100	80.449	Tursiops_truncatus
ENSLAFG00000002115	RPUSD1	100	83.775	ENSUAMG00000012736	RPUSD1	100	83.775	Ursus_americanus
ENSLAFG00000002115	RPUSD1	100	83.775	ENSUMAG00000021174	RPUSD1	100	83.775	Ursus_maritimus
ENSLAFG00000002115	RPUSD1	99	84.385	ENSVVUG00000012357	RPUSD1	99	84.385	Vulpes_vulpes
ENSLAFG00000002115	RPUSD1	100	61.184	ENSXETG00000007184	rpusd1	100	61.184	Xenopus_tropicalis
ENSLAFG00000002115	RPUSD1	98	56.000	ENSXCOG00000017930	rpusd1	98	56.000	Xiphophorus_couchianus
ENSLAFG00000002115	RPUSD1	98	56.333	ENSXMAG00000024084	rpusd1	98	56.333	Xiphophorus_maculatus