EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000002174 (Gene tree)
Gene ID: -
Gene Symbol: TRUB2
Alias: CLONE24922
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 9422 bases
Position: chrscaffold_6:29770330-29779751
Accession: 17170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001819	TruB_N	PF01509.18	2.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002174	TRUB2-201	909	-	ENSLAFP00000001819	303 (aa)	-	G3SPZ1

Gene Model

Click here to download ENSLAFG00000002174's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000002174	TRUB2	65	35.678	ENSLAFG00000015452	TRUB1	56	35.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002174	TRUB2	99	88.742	ENSG00000167112	TRUB2	91	88.742	Homo_sapiens
ENSLAFG00000002174	TRUB2	68	58.049	ENSAPOG00000015733	trub2	74	58.049	Acanthochromis_polyacanthus
ENSLAFG00000002174	TRUB2	91	43.525	ENSAPOG00000018284	-	76	59.542	Acanthochromis_polyacanthus
ENSLAFG00000002174	TRUB2	100	88.119	ENSAMEG00000015395	TRUB2	92	88.119	Ailuropoda_melanoleuca
ENSLAFG00000002174	TRUB2	91	52.878	ENSACIG00000016500	trub2	84	52.878	Amphilophus_citrinellus
ENSLAFG00000002174	TRUB2	91	56.835	ENSAOCG00000002330	trub2	82	56.835	Amphiprion_ocellaris
ENSLAFG00000002174	TRUB2	91	57.194	ENSAPEG00000013177	trub2	82	57.194	Amphiprion_percula
ENSLAFG00000002174	TRUB2	92	55.000	ENSATEG00000011371	trub2	88	55.000	Anabas_testudineus
ENSLAFG00000002174	TRUB2	95	59.107	ENSAPLG00000009254	TRUB2	94	59.794	Anas_platyrhynchos
ENSLAFG00000002174	TRUB2	96	65.411	ENSACAG00000007331	TRUB2	89	65.411	Anolis_carolinensis
ENSLAFG00000002174	TRUB2	98	90.268	ENSANAG00000036234	TRUB2	96	90.268	Aotus_nancymaae
ENSLAFG00000002174	TRUB2	91	53.237	ENSACLG00000010793	trub2	84	53.237	Astatotilapia_calliptera
ENSLAFG00000002174	TRUB2	92	55.714	ENSAMXG00000031679	trub2	80	55.714	Astyanax_mexicanus
ENSLAFG00000002174	TRUB2	54	84.146	ENSBTAG00000004663	TRUB2	100	84.146	Bos_taurus
ENSLAFG00000002174	TRUB2	50	90.667	ENSBTAG00000055269	-	68	90.667	Bos_taurus
ENSLAFG00000002174	TRUB2	98	89.597	ENSCJAG00000020009	TRUB2	90	89.597	Callithrix_jacchus
ENSLAFG00000002174	TRUB2	99	89.333	ENSCAFG00000020068	TRUB2	91	89.333	Canis_familiaris
ENSLAFG00000002174	TRUB2	59	88.202	ENSCAFG00020017325	-	100	88.202	Canis_lupus_dingo
ENSLAFG00000002174	TRUB2	100	88.119	ENSCHIG00000021160	TRUB2	92	88.119	Capra_hircus
ENSLAFG00000002174	TRUB2	99	90.970	ENSTSYG00000034163	TRUB2	90	90.970	Carlito_syrichta
ENSLAFG00000002174	TRUB2	87	84.030	ENSCAPG00000000223	TRUB2	90	84.397	Cavia_aperea
ENSLAFG00000002174	TRUB2	99	84.667	ENSCPOG00000013535	TRUB2	92	85.393	Cavia_porcellus
ENSLAFG00000002174	TRUB2	98	86.149	ENSCCAG00000028463	-	89	86.149	Cebus_capucinus
ENSLAFG00000002174	TRUB2	99	88.411	ENSCCAG00000026531	-	92	88.411	Cebus_capucinus
ENSLAFG00000002174	TRUB2	99	90.397	ENSCATG00000038234	TRUB2	91	90.397	Cercocebus_atys
ENSLAFG00000002174	TRUB2	100	84.818	ENSCLAG00000001702	TRUB2	100	77.949	Chinchilla_lanigera
ENSLAFG00000002174	TRUB2	99	84.488	ENSCSAG00000014117	TRUB2	91	84.488	Chlorocebus_sabaeus
ENSLAFG00000002174	TRUB2	100	88.779	ENSCHOG00000001555	TRUB2	92	88.779	Choloepus_hoffmanni
ENSLAFG00000002174	TRUB2	98	64.646	ENSCPBG00000025186	TRUB2	87	64.646	Chrysemys_picta_bellii
ENSLAFG00000002174	TRUB2	95	33.333	ENSCSAVG00000003930	-	90	33.333	Ciona_savignyi
ENSLAFG00000002174	TRUB2	98	81.208	ENSCANG00000016135	TRUB2	89	81.208	Colobus_angolensis_palliatus
ENSLAFG00000002174	TRUB2	100	83.828	ENSCGRG00001024441	Trub2	96	82.584	Cricetulus_griseus_chok1gshd
ENSLAFG00000002174	TRUB2	100	83.828	ENSCGRG00000005633	Trub2	92	83.828	Cricetulus_griseus_crigri
ENSLAFG00000002174	TRUB2	91	53.791	ENSCSEG00000001331	trub2	83	53.791	Cynoglossus_semilaevis
ENSLAFG00000002174	TRUB2	91	55.072	ENSCVAG00000009901	trub2	83	55.072	Cyprinodon_variegatus
ENSLAFG00000002174	TRUB2	91	54.676	ENSDARG00000028379	trub2	79	54.676	Danio_rerio
ENSLAFG00000002174	TRUB2	100	86.469	ENSDNOG00000045679	-	92	86.469	Dasypus_novemcinctus
ENSLAFG00000002174	TRUB2	99	61.438	ENSDNOG00000043967	-	90	61.438	Dasypus_novemcinctus
ENSLAFG00000002174	TRUB2	99	87.000	ENSDORG00000016222	Trub2	95	87.000	Dipodomys_ordii
ENSLAFG00000002174	TRUB2	88	33.456	FBgn0033060	CG7849	85	33.456	Drosophila_melanogaster
ENSLAFG00000002174	TRUB2	98	87.919	ENSETEG00000009114	TRUB2	92	87.919	Echinops_telfairi
ENSLAFG00000002174	TRUB2	82	48.148	ENSEBUG00000015723	trub2	87	48.148	Eptatretus_burgeri
ENSLAFG00000002174	TRUB2	100	90.759	ENSEASG00005016819	TRUB2	92	90.759	Equus_asinus_asinus
ENSLAFG00000002174	TRUB2	100	91.419	ENSECAG00000023520	TRUB2	92	91.419	Equus_caballus
ENSLAFG00000002174	TRUB2	100	89.109	ENSEEUG00000008908	TRUB2	92	89.109	Erinaceus_europaeus
ENSLAFG00000002174	TRUB2	91	55.326	ENSELUG00000002376	trub2	91	55.326	Esox_lucius
ENSLAFG00000002174	TRUB2	98	89.667	ENSFCAG00000005839	TRUB2	93	89.667	Felis_catus
ENSLAFG00000002174	TRUB2	87	63.636	ENSFALG00000001364	TRUB2	85	64.394	Ficedula_albicollis
ENSLAFG00000002174	TRUB2	100	83.498	ENSFDAG00000021374	TRUB2	92	83.498	Fukomys_damarensis
ENSLAFG00000002174	TRUB2	94	48.958	ENSFHEG00000014655	trub2	85	48.958	Fundulus_heteroclitus
ENSLAFG00000002174	TRUB2	91	45.652	ENSGMOG00000000981	trub2	92	45.652	Gadus_morhua
ENSLAFG00000002174	TRUB2	98	60.067	ENSGALG00000004920	TRUB2	73	60.067	Gallus_gallus
ENSLAFG00000002174	TRUB2	91	55.755	ENSGAFG00000010107	trub2	87	53.425	Gambusia_affinis
ENSLAFG00000002174	TRUB2	91	55.914	ENSGACG00000001476	trub2	84	55.914	Gasterosteus_aculeatus
ENSLAFG00000002174	TRUB2	96	66.897	ENSGAGG00000022872	TRUB2	86	66.897	Gopherus_agassizii
ENSLAFG00000002174	TRUB2	99	89.404	ENSGGOG00000014780	TRUB2	91	89.404	Gorilla_gorilla
ENSLAFG00000002174	TRUB2	91	53.957	ENSHBUG00000022384	trub2	84	53.957	Haplochromis_burtoni
ENSLAFG00000002174	TRUB2	100	83.828	ENSHGLG00000016715	TRUB2	92	83.828	Heterocephalus_glaber_female
ENSLAFG00000002174	TRUB2	100	83.828	ENSHGLG00100016548	TRUB2	92	83.828	Heterocephalus_glaber_male
ENSLAFG00000002174	TRUB2	91	56.835	ENSHCOG00000017748	trub2	85	56.835	Hippocampus_comes
ENSLAFG00000002174	TRUB2	96	52.901	ENSIPUG00000017725	hdhd3	51	52.901	Ictalurus_punctatus
ENSLAFG00000002174	TRUB2	100	85.149	ENSSTOG00000008024	-	92	85.149	Ictidomys_tridecemlineatus
ENSLAFG00000002174	TRUB2	99	86.288	ENSSTOG00000022617	-	91	86.288	Ictidomys_tridecemlineatus
ENSLAFG00000002174	TRUB2	99	77.258	ENSJJAG00000019181	Trub2	89	77.258	Jaculus_jaculus
ENSLAFG00000002174	TRUB2	91	54.152	ENSKMAG00000007861	trub2	83	54.152	Kryptolebias_marmoratus
ENSLAFG00000002174	TRUB2	92	53.571	ENSLBEG00000000907	trub2	83	53.571	Labrus_bergylta
ENSLAFG00000002174	TRUB2	94	65.035	ENSLACG00000001515	TRUB2	85	65.035	Latimeria_chalumnae
ENSLAFG00000002174	TRUB2	98	57.475	ENSLOCG00000000885	trub2	99	57.475	Lepisosteus_oculatus
ENSLAFG00000002174	TRUB2	99	90.397	ENSMFAG00000000881	TRUB2	91	90.397	Macaca_fascicularis
ENSLAFG00000002174	TRUB2	99	90.397	ENSMMUG00000014146	TRUB2	91	90.397	Macaca_mulatta
ENSLAFG00000002174	TRUB2	99	90.397	ENSMNEG00000011189	TRUB2	91	90.397	Macaca_nemestrina
ENSLAFG00000002174	TRUB2	99	90.397	ENSMLEG00000037270	TRUB2	91	90.397	Mandrillus_leucophaeus
ENSLAFG00000002174	TRUB2	91	55.396	ENSMAMG00000023643	trub2	92	55.396	Mastacembelus_armatus
ENSLAFG00000002174	TRUB2	91	53.597	ENSMZEG00005016018	trub2	84	53.597	Maylandia_zebra
ENSLAFG00000002174	TRUB2	66	67.839	ENSMGAG00000003894	TRUB2	99	67.839	Meleagris_gallopavo
ENSLAFG00000002174	TRUB2	100	84.488	ENSMAUG00000010403	Trub2	98	78.534	Mesocricetus_auratus
ENSLAFG00000002174	TRUB2	98	89.597	ENSMICG00000047032	TRUB2	90	89.597	Microcebus_murinus
ENSLAFG00000002174	TRUB2	99	85.284	ENSMOCG00000014291	Trub2	99	85.284	Microtus_ochrogaster
ENSLAFG00000002174	TRUB2	91	55.914	ENSMMOG00000021674	trub2	86	55.914	Mola_mola
ENSLAFG00000002174	TRUB2	96	75.342	ENSMODG00000005940	TRUB2	99	75.342	Monodelphis_domestica
ENSLAFG00000002174	TRUB2	91	58.363	ENSMALG00000021231	trub2	83	58.363	Monopterus_albus
ENSLAFG00000002174	TRUB2	100	83.828	MGP_CAROLIEiJ_G0023368	Trub2	92	83.828	Mus_caroli
ENSLAFG00000002174	TRUB2	100	83.168	ENSMUSG00000039826	Trub2	92	83.168	Mus_musculus
ENSLAFG00000002174	TRUB2	100	82.838	MGP_PahariEiJ_G0024826	Trub2	92	82.838	Mus_pahari
ENSLAFG00000002174	TRUB2	100	83.498	MGP_SPRETEiJ_G0024286	Trub2	92	83.498	Mus_spretus
ENSLAFG00000002174	TRUB2	100	86.469	ENSMPUG00000013206	TRUB2	83	86.469	Mustela_putorius_furo
ENSLAFG00000002174	TRUB2	100	89.769	ENSMLUG00000005256	TRUB2	91	89.769	Myotis_lucifugus
ENSLAFG00000002174	TRUB2	99	85.284	ENSNGAG00000018679	Trub2	91	85.284	Nannospalax_galili
ENSLAFG00000002174	TRUB2	91	53.237	ENSNBRG00000016294	trub2	84	53.237	Neolamprologus_brichardi
ENSLAFG00000002174	TRUB2	99	88.079	ENSNLEG00000017556	TRUB2	91	88.079	Nomascus_leucogenys
ENSLAFG00000002174	TRUB2	98	77.027	ENSMEUG00000000484	TRUB2	95	77.027	Notamacropus_eugenii
ENSLAFG00000002174	TRUB2	99	83.946	ENSOPRG00000001981	TRUB2	91	83.946	Ochotona_princeps
ENSLAFG00000002174	TRUB2	100	83.828	ENSODEG00000017292	TRUB2	93	83.828	Octodon_degus
ENSLAFG00000002174	TRUB2	91	52.878	ENSONIG00000004230	trub2	84	52.878	Oreochromis_niloticus
ENSLAFG00000002174	TRUB2	62	77.540	ENSOANG00000029023	-	83	77.540	Ornithorhynchus_anatinus
ENSLAFG00000002174	TRUB2	98	86.532	ENSOCUG00000026296	TRUB2	82	86.622	Oryctolagus_cuniculus
ENSLAFG00000002174	TRUB2	97	52.542	ENSORLG00000020011	trub2	88	52.542	Oryzias_latipes
ENSLAFG00000002174	TRUB2	97	52.721	ENSORLG00020011028	trub2	86	52.721	Oryzias_latipes_hni
ENSLAFG00000002174	TRUB2	97	52.721	ENSORLG00015007494	trub2	90	52.721	Oryzias_latipes_hsok
ENSLAFG00000002174	TRUB2	91	57.554	ENSOMEG00000006702	trub2	84	57.554	Oryzias_melastigma
ENSLAFG00000002174	TRUB2	51	83.974	ENSOGAG00000003511	-	95	83.974	Otolemur_garnettii
ENSLAFG00000002174	TRUB2	74	87.946	ENSOARG00000003785	-	89	87.946	Ovis_aries
ENSLAFG00000002174	TRUB2	100	87.789	ENSOARG00000010579	-	92	87.789	Ovis_aries
ENSLAFG00000002174	TRUB2	99	89.404	ENSPPAG00000043146	TRUB2	91	89.404	Pan_paniscus
ENSLAFG00000002174	TRUB2	98	89.667	ENSPPRG00000006307	TRUB2	93	89.667	Panthera_pardus
ENSLAFG00000002174	TRUB2	98	89.333	ENSPTIG00000012366	TRUB2	93	89.333	Panthera_tigris_altaica
ENSLAFG00000002174	TRUB2	99	89.735	ENSPTRG00000052151	-	91	89.735	Pan_troglodytes
ENSLAFG00000002174	TRUB2	99	89.735	ENSPTRG00000021423	TRUB2	91	89.735	Pan_troglodytes
ENSLAFG00000002174	TRUB2	99	90.397	ENSPANG00000025856	TRUB2	91	90.397	Papio_anubis
ENSLAFG00000002174	TRUB2	91	55.435	ENSPKIG00000019769	trub2	90	55.435	Paramormyrops_kingsleyae
ENSLAFG00000002174	TRUB2	97	59.933	ENSPSIG00000015701	TRUB2	99	59.933	Pelodiscus_sinensis
ENSLAFG00000002174	TRUB2	94	52.083	ENSPMGG00000010206	trub2	90	52.083	Periophthalmus_magnuspinnatus
ENSLAFG00000002174	TRUB2	99	85.333	ENSPEMG00000017893	Trub2	96	83.240	Peromyscus_maniculatus_bairdii
ENSLAFG00000002174	TRUB2	98	77.027	ENSPCIG00000026731	TRUB2	95	77.027	Phascolarctos_cinereus
ENSLAFG00000002174	TRUB2	91	54.317	ENSPFOG00000018018	trub2	75	53.357	Poecilia_formosa
ENSLAFG00000002174	TRUB2	91	54.676	ENSPLAG00000010484	trub2	81	53.710	Poecilia_latipinna
ENSLAFG00000002174	TRUB2	96	52.577	ENSPMEG00000012913	trub2	86	52.577	Poecilia_mexicana
ENSLAFG00000002174	TRUB2	91	53.957	ENSPREG00000002549	trub2	84	53.004	Poecilia_reticulata
ENSLAFG00000002174	TRUB2	99	87.417	ENSPPYG00000019650	TRUB2	93	87.417	Pongo_abelii
ENSLAFG00000002174	TRUB2	99	93.709	ENSPCAG00000015068	TRUB2	92	93.709	Procavia_capensis
ENSLAFG00000002174	TRUB2	99	90.635	ENSPCOG00000017100	TRUB2	90	90.635	Propithecus_coquereli
ENSLAFG00000002174	TRUB2	92	90.323	ENSPVAG00000001224	TRUB2	94	90.323	Pteropus_vampyrus
ENSLAFG00000002174	TRUB2	91	53.597	ENSPNYG00000013666	trub2	84	53.597	Pundamilia_nyererei
ENSLAFG00000002174	TRUB2	92	54.480	ENSPNAG00000017292	trub2	80	54.480	Pygocentrus_nattereri
ENSLAFG00000002174	TRUB2	98	83.557	ENSRNOG00000043189	Trub2	92	83.557	Rattus_norvegicus
ENSLAFG00000002174	TRUB2	99	81.788	ENSRBIG00000006965	TRUB2	90	81.788	Rhinopithecus_bieti
ENSLAFG00000002174	TRUB2	99	90.397	ENSRROG00000042928	TRUB2	91	90.397	Rhinopithecus_roxellana
ENSLAFG00000002174	TRUB2	99	88.411	ENSSBOG00000022439	TRUB2	91	88.411	Saimiri_boliviensis_boliviensis
ENSLAFG00000002174	TRUB2	92	56.835	ENSSFOG00015013391	trub2	89	56.835	Scleropages_formosus
ENSLAFG00000002174	TRUB2	91	57.194	ENSSMAG00000020820	trub2	84	57.194	Scophthalmus_maximus
ENSLAFG00000002174	TRUB2	91	53.957	ENSSDUG00000016928	trub2	83	53.957	Seriola_dumerili
ENSLAFG00000002174	TRUB2	91	54.317	ENSSLDG00000024701	trub2	83	54.317	Seriola_lalandi_dorsalis
ENSLAFG00000002174	TRUB2	98	62.000	ENSSPUG00000015515	TRUB2	90	62.000	Sphenodon_punctatus
ENSLAFG00000002174	TRUB2	91	58.007	ENSSPAG00000017865	trub2	84	58.007	Stegastes_partitus
ENSLAFG00000002174	TRUB2	99	90.066	ENSSSCG00000005645	TRUB2	90	89.139	Sus_scrofa
ENSLAFG00000002174	TRUB2	86	65.134	ENSTGUG00000003704	TRUB2	99	65.134	Taeniopygia_guttata
ENSLAFG00000002174	TRUB2	92	53.214	ENSTRUG00000015499	trub2	86	53.214	Takifugu_rubripes
ENSLAFG00000002174	TRUB2	92	55.160	ENSTNIG00000014721	trub2	96	55.160	Tetraodon_nigroviridis
ENSLAFG00000002174	TRUB2	65	87.310	ENSTBEG00000000586	TRUB2	88	87.310	Tupaia_belangeri
ENSLAFG00000002174	TRUB2	100	82.838	ENSTTRG00000016486	TRUB2	92	82.838	Tursiops_truncatus
ENSLAFG00000002174	TRUB2	100	89.109	ENSUAMG00000020276	TRUB2	89	89.109	Ursus_americanus
ENSLAFG00000002174	TRUB2	100	89.109	ENSUMAG00000022051	TRUB2	89	89.109	Ursus_maritimus
ENSLAFG00000002174	TRUB2	99	69.000	ENSVPAG00000005793	TRUB2	95	69.000	Vicugna_pacos
ENSLAFG00000002174	TRUB2	99	89.667	ENSVVUG00000013451	TRUB2	86	89.667	Vulpes_vulpes
ENSLAFG00000002174	TRUB2	91	63.406	ENSXETG00000003973	trub2	85	63.406	Xenopus_tropicalis
ENSLAFG00000002174	TRUB2	91	54.317	ENSXCOG00000008759	trub2	83	54.317	Xiphophorus_couchianus
ENSLAFG00000002174	TRUB2	91	54.317	ENSXMAG00000015478	trub2	83	54.317	Xiphophorus_maculatus