EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002238 (Gene tree)
Gene ID: -
Gene Symbol: CWC25
Alias: CCDC49|FLJ20291
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 19223 bases
Position: chrscaffold_31:21176190-21195412
Accession: 25989
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001870	CWC25	PF12542.8	4.8e-20	1	1
ENSLAFP00000027232	CWC25	PF12542.8	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000031424	CWC25-201	1284	-	ENSLAFP00000027232	427 (aa)	-	G3UHC4
ENSLAFT00000002238	CWC25-202	1263	-	ENSLAFP00000001870	421 (aa)	-	G3SQ32

Gene Model

Click here to download ENSLAFG00000002238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002238's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002238	CWC25	100	91.822	ENSG00000273559	CWC25	94	100.000	Homo_sapiens
ENSLAFG00000002238	CWC25	100	90.118	ENSAMEG00000004292	CWC25	100	90.118	Ailuropoda_melanoleuca
ENSLAFG00000002238	CWC25	100	51.670	ENSATEG00000000799	cwc25	100	54.147	Anabas_testudineus
ENSLAFG00000002238	CWC25	99	67.453	ENSAPLG00000003710	CWC25	99	66.667	Anas_platyrhynchos
ENSLAFG00000002238	CWC25	100	69.504	ENSACAG00000013140	CWC25	100	68.558	Anolis_carolinensis
ENSLAFG00000002238	CWC25	78	93.548	ENSANAG00000033550	CWC25	90	93.548	Aotus_nancymaae
ENSLAFG00000002238	CWC25	100	92.056	ENSBTAG00000030591	CWC25	100	92.471	Bos_taurus
ENSLAFG00000002238	CWC25	100	89.882	ENSCJAG00000008289	CWC25	100	89.882	Callithrix_jacchus
ENSLAFG00000002238	CWC25	100	89.882	ENSCAFG00000016561	CWC25	100	89.412	Canis_familiaris
ENSLAFG00000002238	CWC25	100	89.647	ENSCAFG00020023017	CWC25	100	89.176	Canis_lupus_dingo
ENSLAFG00000002238	CWC25	100	90.888	ENSCHIG00000015063	CWC25	100	91.294	Capra_hircus
ENSLAFG00000002238	CWC25	100	83.333	ENSTSYG00000011332	CWC25	100	80.841	Carlito_syrichta
ENSLAFG00000002238	CWC25	99	77.778	ENSCAPG00000014542	CWC25	99	77.778	Cavia_aperea
ENSLAFG00000002238	CWC25	100	75.587	ENSCPOG00000015127	CWC25	100	74.941	Cavia_porcellus
ENSLAFG00000002238	CWC25	100	90.094	ENSCCAG00000028719	CWC25	100	90.094	Cebus_capucinus
ENSLAFG00000002238	CWC25	100	85.349	ENSCATG00000040771	CWC25	100	85.748	Cercocebus_atys
ENSLAFG00000002238	CWC25	100	80.000	ENSCLAG00000017102	CWC25	87	99.301	Chinchilla_lanigera
ENSLAFG00000002238	CWC25	100	90.187	ENSCSAG00000002654	CWC25	100	89.252	Chlorocebus_sabaeus
ENSLAFG00000002238	CWC25	99	71.429	ENSCPBG00000027490	CWC25	88	71.905	Chrysemys_picta_bellii
ENSLAFG00000002238	CWC25	100	84.651	ENSCANG00000037099	CWC25	100	85.047	Colobus_angolensis_palliatus
ENSLAFG00000002238	CWC25	100	88.318	ENSCGRG00001020785	Cwc25	100	88.318	Cricetulus_griseus_chok1gshd
ENSLAFG00000002238	CWC25	100	88.318	ENSCGRG00000005085	Cwc25	100	88.318	Cricetulus_griseus_crigri
ENSLAFG00000002238	CWC25	100	53.613	ENSDARG00000003382	cwc25	100	51.756	Danio_rerio
ENSLAFG00000002238	CWC25	100	91.608	ENSDNOG00000042410	CWC25	100	90.909	Dasypus_novemcinctus
ENSLAFG00000002238	CWC25	100	90.118	ENSDORG00000003061	Cwc25	100	90.118	Dipodomys_ordii
ENSLAFG00000002238	CWC25	63	42.487	FBgn0031452	Cwc25	54	42.553	Drosophila_melanogaster
ENSLAFG00000002238	CWC25	100	48.585	ENSEBUG00000002947	cwc25	82	62.676	Eptatretus_burgeri
ENSLAFG00000002238	CWC25	100	91.822	ENSEASG00005001871	CWC25	100	92.235	Equus_asinus_asinus
ENSLAFG00000002238	CWC25	100	92.056	ENSECAG00000019122	CWC25	100	92.471	Equus_caballus
ENSLAFG00000002238	CWC25	76	74.233	ENSEEUG00000000018	CWC25	100	74.613	Erinaceus_europaeus
ENSLAFG00000002238	CWC25	100	89.720	ENSFCAG00000028119	CWC25	100	90.118	Felis_catus
ENSLAFG00000002238	CWC25	99	59.268	ENSFALG00000013293	CWC25	99	54.167	Ficedula_albicollis
ENSLAFG00000002238	CWC25	100	73.412	ENSFDAG00000007745	CWC25	100	73.647	Fukomys_damarensis
ENSLAFG00000002238	CWC25	63	71.519	ENSGMOG00000013001	cwc25	74	71.687	Gadus_morhua
ENSLAFG00000002238	CWC25	100	69.374	ENSGALG00000001624	CWC25	100	70.561	Gallus_gallus
ENSLAFG00000002238	CWC25	100	72.770	ENSGAGG00000022972	CWC25	100	73.005	Gopherus_agassizii
ENSLAFG00000002238	CWC25	100	91.355	ENSGGOG00000007083	CWC25	100	91.355	Gorilla_gorilla
ENSLAFG00000002238	CWC25	100	78.689	ENSHGLG00000014785	CWC25	100	77.518	Heterocephalus_glaber_female
ENSLAFG00000002238	CWC25	100	76.512	ENSHGLG00100017354	CWC25	100	75.581	Heterocephalus_glaber_male
ENSLAFG00000002238	CWC25	100	88.000	ENSSTOG00000014268	CWC25	100	88.000	Ictidomys_tridecemlineatus
ENSLAFG00000002238	CWC25	100	54.630	ENSLOCG00000013707	cwc25	100	53.472	Lepisosteus_oculatus
ENSLAFG00000002238	CWC25	85	89.286	ENSMFAG00000002357	CWC25	100	89.286	Macaca_fascicularis
ENSLAFG00000002238	CWC25	85	89.286	ENSMMUG00000002944	CWC25	90	89.286	Macaca_mulatta
ENSLAFG00000002238	CWC25	100	90.888	ENSMNEG00000033729	CWC25	100	90.888	Macaca_nemestrina
ENSLAFG00000002238	CWC25	91	90.256	ENSMLEG00000033355	CWC25	99	90.256	Mandrillus_leucophaeus
ENSLAFG00000002238	CWC25	99	69.213	ENSMGAG00000005158	CWC25	99	70.163	Meleagris_gallopavo
ENSLAFG00000002238	CWC25	100	91.589	ENSMICG00000003004	CWC25	100	92.000	Microcebus_murinus
ENSLAFG00000002238	CWC25	100	86.682	ENSMOCG00000000224	Cwc25	100	86.682	Microtus_ochrogaster
ENSLAFG00000002238	CWC25	100	80.706	ENSMODG00000012627	CWC25	100	81.176	Monodelphis_domestica
ENSLAFG00000002238	CWC25	100	81.948	MGP_CAROLIEiJ_G0017064	Cwc25	100	83.373	Mus_caroli
ENSLAFG00000002238	CWC25	100	85.273	ENSMUSG00000018541	Cwc25	100	85.273	Mus_musculus
ENSLAFG00000002238	CWC25	100	83.412	MGP_PahariEiJ_G0018193	Cwc25	100	82.227	Mus_pahari
ENSLAFG00000002238	CWC25	100	85.511	MGP_SPRETEiJ_G0017910	Cwc25	100	85.511	Mus_spretus
ENSLAFG00000002238	CWC25	100	89.882	ENSMPUG00000015077	CWC25	100	89.647	Mustela_putorius_furo
ENSLAFG00000002238	CWC25	100	91.765	ENSMLUG00000029653	CWC25	100	91.765	Myotis_lucifugus
ENSLAFG00000002238	CWC25	100	85.446	ENSNGAG00000007394	Cwc25	100	85.446	Nannospalax_galili
ENSLAFG00000002238	CWC25	100	92.000	ENSNLEG00000000617	CWC25	100	92.000	Nomascus_leucogenys
ENSLAFG00000002238	CWC25	99	81.862	ENSMEUG00000004156	CWC25	100	81.384	Notamacropus_eugenii
ENSLAFG00000002238	CWC25	85	71.389	ENSOPRG00000001941	CWC25	100	71.389	Ochotona_princeps
ENSLAFG00000002238	CWC25	100	74.528	ENSODEG00000017487	CWC25	100	76.526	Octodon_degus
ENSLAFG00000002238	CWC25	91	69.923	ENSOANG00000001231	-	100	69.289	Ornithorhynchus_anatinus
ENSLAFG00000002238	CWC25	100	87.850	ENSOCUG00000013906	CWC25	100	87.850	Oryctolagus_cuniculus
ENSLAFG00000002238	CWC25	100	50.235	ENSOMEG00000019365	cwc25	61	58.091	Oryzias_melastigma
ENSLAFG00000002238	CWC25	100	81.840	ENSOGAG00000008785	CWC25	100	81.840	Otolemur_garnettii
ENSLAFG00000002238	CWC25	100	90.654	ENSOARG00000009937	CWC25	100	91.059	Ovis_aries
ENSLAFG00000002238	CWC25	100	91.822	ENSPPAG00000023487	CWC25	100	91.822	Pan_paniscus
ENSLAFG00000002238	CWC25	100	89.953	ENSPPRG00000005029	CWC25	100	90.353	Panthera_pardus
ENSLAFG00000002238	CWC25	100	89.953	ENSPTIG00000020264	CWC25	100	90.353	Panthera_tigris_altaica
ENSLAFG00000002238	CWC25	100	91.589	ENSPTRG00000009077	CWC25	100	91.589	Pan_troglodytes
ENSLAFG00000002238	CWC25	100	91.121	ENSPANG00000022017	CWC25	100	91.121	Papio_anubis
ENSLAFG00000002238	CWC25	100	48.946	ENSPKIG00000007116	cwc25	99	45.368	Paramormyrops_kingsleyae
ENSLAFG00000002238	CWC25	88	68.000	ENSPSIG00000011817	CWC25	99	64.785	Pelodiscus_sinensis
ENSLAFG00000002238	CWC25	100	87.204	ENSPEMG00000000026	Cwc25	100	87.441	Peromyscus_maniculatus_bairdii
ENSLAFG00000002238	CWC25	100	82.118	ENSPCIG00000002943	CWC25	100	81.647	Phascolarctos_cinereus
ENSLAFG00000002238	CWC25	100	90.654	ENSPPYG00000008503	CWC25	100	90.654	Pongo_abelii
ENSLAFG00000002238	CWC25	90	85.864	ENSPCAG00000000433	CWC25	100	84.293	Procavia_capensis
ENSLAFG00000002238	CWC25	100	92.000	ENSPCOG00000023678	CWC25	100	92.000	Propithecus_coquereli
ENSLAFG00000002238	CWC25	99	90.995	ENSPVAG00000002273	CWC25	100	91.408	Pteropus_vampyrus
ENSLAFG00000002238	CWC25	100	85.273	ENSRNOG00000004091	Cwc25	100	84.561	Rattus_norvegicus
ENSLAFG00000002238	CWC25	100	90.421	ENSRBIG00000033457	CWC25	100	90.421	Rhinopithecus_bieti
ENSLAFG00000002238	CWC25	100	90.888	ENSRROG00000039968	CWC25	100	90.888	Rhinopithecus_roxellana
ENSLAFG00000002238	CWC25	100	83.765	ENSSHAG00000017267	CWC25	100	83.529	Sarcophilus_harrisii
ENSLAFG00000002238	CWC25	100	52.304	ENSSDUG00000004302	cwc25	60	60.331	Seriola_dumerili
ENSLAFG00000002238	CWC25	100	52.304	ENSSLDG00000005761	cwc25	60	59.917	Seriola_lalandi_dorsalis
ENSLAFG00000002238	CWC25	85	78.846	ENSSARG00000006871	CWC25	100	78.846	Sorex_araneus
ENSLAFG00000002238	CWC25	100	72.664	ENSSPUG00000018024	CWC25	100	71.262	Sphenodon_punctatus
ENSLAFG00000002238	CWC25	100	89.227	ENSSSCG00000021478	CWC25	100	89.176	Sus_scrofa
ENSLAFG00000002238	CWC25	99	62.585	ENSTGUG00000003011	CWC25	100	59.485	Taeniopygia_guttata
ENSLAFG00000002238	CWC25	83	100.000	ENSTBEG00000013187	CWC25	85	100.000	Tupaia_belangeri
ENSLAFG00000002238	CWC25	99	89.336	ENSTTRG00000006662	CWC25	100	89.737	Tursiops_truncatus
ENSLAFG00000002238	CWC25	100	90.353	ENSUAMG00000005592	CWC25	100	90.353	Ursus_americanus
ENSLAFG00000002238	CWC25	100	90.118	ENSUMAG00000017097	CWC25	100	90.118	Ursus_maritimus
ENSLAFG00000002238	CWC25	99	82.423	ENSVPAG00000005680	CWC25	100	82.423	Vicugna_pacos
ENSLAFG00000002238	CWC25	100	90.118	ENSVVUG00000002182	CWC25	100	89.647	Vulpes_vulpes
ENSLAFG00000002238	CWC25	99	57.518	ENSXETG00000023722	cwc25	100	59.666	Xenopus_tropicalis
ENSLAFG00000002238	CWC25	67	74.854	ENSXMAG00000018113	cwc25	100	51.522	Xiphophorus_maculatus