EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000002317 (Gene tree)
Gene ID: -
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 16597 bases
Position: chrscaffold_68:3010702-3027298
Accession: 100677392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000029452	zf-C2H2	PF00096.26	1.7e-26	1	5
ENSLAFP00000029452	zf-C2H2	PF00096.26	1.7e-26	2	5
ENSLAFP00000029452	zf-C2H2	PF00096.26	1.7e-26	3	5
ENSLAFP00000029452	zf-C2H2	PF00096.26	1.7e-26	4	5
ENSLAFP00000029452	zf-C2H2	PF00096.26	1.7e-26	5	5
ENSLAFP00000001936	zf-C2H2	PF00096.26	2.1e-26	1	5
ENSLAFP00000001936	zf-C2H2	PF00096.26	2.1e-26	2	5
ENSLAFP00000001936	zf-C2H2	PF00096.26	2.1e-26	3	5
ENSLAFP00000001936	zf-C2H2	PF00096.26	2.1e-26	4	5
ENSLAFP00000001936	zf-C2H2	PF00096.26	2.1e-26	5	5
ENSLAFP00000029452	zf-met	PF12874.7	2.1e-12	1	1
ENSLAFP00000001936	zf-met	PF12874.7	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033344	PATZ1-201	2025	-	ENSLAFP00000029452	674 (aa)	-	G3UNP3
ENSLAFT00000002317	PATZ1-202	2061	-	ENSLAFP00000001936	687 (aa)	XP_003419242	G3SQ80

Gene Model

Click here to download ENSLAFG00000002317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000002317	PATZ1	71	31.535	ENSLAFG00000012902	ZBTB41	58	31.535
ENSLAFG00000002317	PATZ1	59	34.028	ENSLAFG00000031653	-	99	34.177
ENSLAFG00000002317	PATZ1	50	31.673	ENSLAFG00000011022	ZFP69B	60	31.673
ENSLAFG00000002317	PATZ1	54	35.795	ENSLAFG00000014451	-	77	35.795
ENSLAFG00000002317	PATZ1	73	31.724	ENSLAFG00000003570	ZBTB47	64	31.973
ENSLAFG00000002317	PATZ1	54	36.257	ENSLAFG00000006532	PRDM5	97	36.257
ENSLAFG00000002317	PATZ1	74	33.529	ENSLAFG00000026719	ZBTB24	71	32.941
ENSLAFG00000002317	PATZ1	54	33.529	ENSLAFG00000003125	ZFP1	56	33.529
ENSLAFG00000002317	PATZ1	87	34.783	ENSLAFG00000002458	GZF1	96	32.174
ENSLAFG00000002317	PATZ1	51	34.545	ENSLAFG00000008866	PRDM15	51	34.545
ENSLAFG00000002317	PATZ1	53	31.418	ENSLAFG00000022290	ZNF668	90	31.418
ENSLAFG00000002317	PATZ1	55	32.447	ENSLAFG00000014626	ZBTB16	55	32.447
ENSLAFG00000002317	PATZ1	50	31.602	ENSLAFG00000011186	ZNF235	75	34.503
ENSLAFG00000002317	PATZ1	73	32.500	ENSLAFG00000004952	ZBTB14	52	35.789
ENSLAFG00000002317	PATZ1	54	31.599	ENSLAFG00000002909	-	76	31.599
ENSLAFG00000002317	PATZ1	55	32.121	ENSLAFG00000032716	-	100	32.121
ENSLAFG00000002317	PATZ1	57	33.180	ENSLAFG00000022529	ZNF628	100	31.381

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002317	PATZ1	100	98.544	ENSG00000100105	PATZ1	100	98.544	Homo_sapiens
ENSLAFG00000002317	PATZ1	100	54.993	ENSAPOG00000018447	patz1	100	60.601	Acanthochromis_polyacanthus
ENSLAFG00000002317	PATZ1	100	98.836	ENSAMEG00000007074	PATZ1	100	98.836	Ailuropoda_melanoleuca
ENSLAFG00000002317	PATZ1	100	59.565	ENSACIG00000016779	patz1	100	59.565	Amphilophus_citrinellus
ENSLAFG00000002317	PATZ1	100	58.631	ENSAPEG00000013354	patz1	100	58.773	Amphiprion_percula
ENSLAFG00000002317	PATZ1	100	62.387	ENSATEG00000011260	patz1	100	59.393	Anabas_testudineus
ENSLAFG00000002317	PATZ1	86	91.781	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
ENSLAFG00000002317	PATZ1	100	98.544	ENSANAG00000029603	PATZ1	100	98.544	Aotus_nancymaae
ENSLAFG00000002317	PATZ1	97	63.584	ENSAMXG00000002273	patz1	98	63.584	Astyanax_mexicanus
ENSLAFG00000002317	PATZ1	100	98.836	ENSBTAG00000005478	PATZ1	100	98.836	Bos_taurus
ENSLAFG00000002317	PATZ1	100	98.544	ENSCJAG00000010978	PATZ1	100	98.544	Callithrix_jacchus
ENSLAFG00000002317	PATZ1	100	98.981	ENSCAFG00000013087	PATZ1	100	98.981	Canis_familiaris
ENSLAFG00000002317	PATZ1	100	98.690	ENSCHIG00000020203	PATZ1	100	98.690	Capra_hircus
ENSLAFG00000002317	PATZ1	100	98.253	ENSTSYG00000033183	PATZ1	100	98.253	Carlito_syrichta
ENSLAFG00000002317	PATZ1	100	98.544	ENSCCAG00000028772	PATZ1	100	98.544	Cebus_capucinus
ENSLAFG00000002317	PATZ1	100	98.836	ENSCATG00000006101	PATZ1	100	98.836	Cercocebus_atys
ENSLAFG00000002317	PATZ1	100	88.986	ENSCPBG00000011277	PATZ1	100	88.696	Chrysemys_picta_bellii
ENSLAFG00000002317	PATZ1	100	98.836	ENSCANG00000024972	PATZ1	100	98.836	Colobus_angolensis_palliatus
ENSLAFG00000002317	PATZ1	100	96.361	ENSCGRG00001004071	Patz1	100	96.361	Cricetulus_griseus_chok1gshd
ENSLAFG00000002317	PATZ1	93	97.045	ENSCGRG00000004814	Patz1	100	97.045	Cricetulus_griseus_crigri
ENSLAFG00000002317	PATZ1	100	55.920	ENSCSEG00000001385	patz1	100	56.011	Cynoglossus_semilaevis
ENSLAFG00000002317	PATZ1	100	59.312	ENSCVAG00000007684	patz1	100	59.397	Cyprinodon_variegatus
ENSLAFG00000002317	PATZ1	97	56.769	ENSDARG00000076584	patz1	98	56.769	Danio_rerio
ENSLAFG00000002317	PATZ1	90	98.546	ENSDNOG00000003183	PATZ1	100	98.546	Dasypus_novemcinctus
ENSLAFG00000002317	PATZ1	100	98.690	ENSDORG00000023834	Patz1	100	98.690	Dipodomys_ordii
ENSLAFG00000002317	PATZ1	100	98.544	ENSECAG00000025030	PATZ1	100	98.544	Equus_caballus
ENSLAFG00000002317	PATZ1	97	64.179	ENSELUG00000002333	patz1	100	55.814	Esox_lucius
ENSLAFG00000002317	PATZ1	100	98.981	ENSFCAG00000030253	PATZ1	100	98.981	Felis_catus
ENSLAFG00000002317	PATZ1	87	91.993	ENSFALG00000007450	PATZ1	99	90.971	Ficedula_albicollis
ENSLAFG00000002317	PATZ1	96	94.419	ENSFDAG00000005614	PATZ1	100	94.419	Fukomys_damarensis
ENSLAFG00000002317	PATZ1	100	57.917	ENSFHEG00000014755	patz1	100	57.775	Fundulus_heteroclitus
ENSLAFG00000002317	PATZ1	98	56.011	ENSGMOG00000001062	patz1	98	55.853	Gadus_morhua
ENSLAFG00000002317	PATZ1	100	88.633	ENSGALG00000006934	PATZ1	100	87.338	Gallus_gallus
ENSLAFG00000002317	PATZ1	100	55.352	ENSGAFG00000010053	patz1	100	55.493	Gambusia_affinis
ENSLAFG00000002317	PATZ1	86	91.938	ENSGAGG00000003214	PATZ1	100	90.909	Gopherus_agassizii
ENSLAFG00000002317	PATZ1	100	98.690	ENSGGOG00000017171	PATZ1	100	98.690	Gorilla_gorilla
ENSLAFG00000002317	PATZ1	100	55.461	ENSHCOG00000017644	patz1	98	62.847	Hippocampus_comes
ENSLAFG00000002317	PATZ1	97	55.108	ENSIPUG00000017653	patz1	97	61.364	Ictalurus_punctatus
ENSLAFG00000002317	PATZ1	100	98.836	ENSSTOG00000020707	PATZ1	100	98.836	Ictidomys_tridecemlineatus
ENSLAFG00000002317	PATZ1	100	95.821	ENSJJAG00000015259	Patz1	100	95.821	Jaculus_jaculus
ENSLAFG00000002317	PATZ1	100	58.900	ENSKMAG00000008157	patz1	100	59.281	Kryptolebias_marmoratus
ENSLAFG00000002317	PATZ1	100	98.690	ENSMFAG00000040968	PATZ1	100	98.690	Macaca_fascicularis
ENSLAFG00000002317	PATZ1	100	98.690	ENSMNEG00000037588	PATZ1	100	98.690	Macaca_nemestrina
ENSLAFG00000002317	PATZ1	100	98.836	ENSMLEG00000030938	PATZ1	100	98.836	Mandrillus_leucophaeus
ENSLAFG00000002317	PATZ1	100	57.756	ENSMAMG00000023652	patz1	100	57.895	Mastacembelus_armatus
ENSLAFG00000002317	PATZ1	87	88.034	ENSMGAG00000008439	PATZ1	100	87.009	Meleagris_gallopavo
ENSLAFG00000002317	PATZ1	100	98.108	ENSMAUG00000004129	Patz1	100	98.108	Mesocricetus_auratus
ENSLAFG00000002317	PATZ1	100	98.253	ENSMICG00000005430	PATZ1	100	98.253	Microcebus_murinus
ENSLAFG00000002317	PATZ1	100	97.962	ENSMOCG00000014488	Patz1	100	97.962	Microtus_ochrogaster
ENSLAFG00000002317	PATZ1	100	49.545	ENSMMOG00000021679	patz1	100	49.545	Mola_mola
ENSLAFG00000002317	PATZ1	100	58.069	ENSMALG00000021172	patz1	100	57.781	Monopterus_albus
ENSLAFG00000002317	PATZ1	100	97.962	MGP_CAROLIEiJ_G0016007	Patz1	100	97.962	Mus_caroli
ENSLAFG00000002317	PATZ1	100	98.108	ENSMUSG00000020453	Patz1	100	98.108	Mus_musculus
ENSLAFG00000002317	PATZ1	100	98.108	MGP_PahariEiJ_G0016884	Patz1	100	98.108	Mus_pahari
ENSLAFG00000002317	PATZ1	100	98.108	MGP_SPRETEiJ_G0016846	Patz1	100	98.108	Mus_spretus
ENSLAFG00000002317	PATZ1	100	98.690	ENSMLUG00000009942	PATZ1	100	98.690	Myotis_lucifugus
ENSLAFG00000002317	PATZ1	100	98.399	ENSNGAG00000010268	Patz1	100	98.399	Nannospalax_galili
ENSLAFG00000002317	PATZ1	100	59.456	ENSNBRG00000016032	patz1	100	59.456	Neolamprologus_brichardi
ENSLAFG00000002317	PATZ1	69	93.548	ENSMEUG00000016293	PATZ1	100	93.548	Notamacropus_eugenii
ENSLAFG00000002317	PATZ1	100	97.817	ENSODEG00000003589	PATZ1	100	97.817	Octodon_degus
ENSLAFG00000002317	PATZ1	100	56.180	ENSONIG00000004248	patz1	100	56.180	Oreochromis_niloticus
ENSLAFG00000002317	PATZ1	100	93.033	ENSOANG00000014654	PATZ1	100	93.179	Ornithorhynchus_anatinus
ENSLAFG00000002317	PATZ1	100	57.479	ENSORLG00020010937	patz1	100	57.341	Oryzias_latipes_hni
ENSLAFG00000002317	PATZ1	100	57.559	ENSORLG00015007396	patz1	100	57.420	Oryzias_latipes_hsok
ENSLAFG00000002317	PATZ1	100	54.958	ENSOMEG00000006636	patz1	100	54.958	Oryzias_melastigma
ENSLAFG00000002317	PATZ1	100	98.399	ENSOGAG00000027905	PATZ1	100	98.399	Otolemur_garnettii
ENSLAFG00000002317	PATZ1	100	98.690	ENSPPAG00000033227	PATZ1	100	98.690	Pan_paniscus
ENSLAFG00000002317	PATZ1	100	98.981	ENSPPRG00000001573	PATZ1	100	98.981	Panthera_pardus
ENSLAFG00000002317	PATZ1	88	98.820	ENSPTIG00000007937	PATZ1	91	99.325	Panthera_tigris_altaica
ENSLAFG00000002317	PATZ1	100	98.690	ENSPTRG00000014268	PATZ1	100	98.690	Pan_troglodytes
ENSLAFG00000002317	PATZ1	100	98.836	ENSPANG00000006821	PATZ1	100	98.836	Papio_anubis
ENSLAFG00000002317	PATZ1	100	63.233	ENSPKIG00000019584	patz1	100	62.947	Paramormyrops_kingsleyae
ENSLAFG00000002317	PATZ1	59	95.455	ENSPSIG00000011562	-	100	95.455	Pelodiscus_sinensis
ENSLAFG00000002317	PATZ1	61	83.051	ENSPSIG00000016553	-	91	82.324	Pelodiscus_sinensis
ENSLAFG00000002317	PATZ1	100	58.083	ENSPMGG00000010196	patz1	100	58.226	Periophthalmus_magnuspinnatus
ENSLAFG00000002317	PATZ1	100	97.962	ENSPEMG00000005321	Patz1	100	97.962	Peromyscus_maniculatus_bairdii
ENSLAFG00000002317	PATZ1	100	55.134	ENSPLAG00000010425	patz1	100	57.072	Poecilia_latipinna
ENSLAFG00000002317	PATZ1	100	55.211	ENSPMEG00000000255	patz1	100	55.352	Poecilia_mexicana
ENSLAFG00000002317	PATZ1	100	58.087	ENSPREG00000002440	patz1	100	58.228	Poecilia_reticulata
ENSLAFG00000002317	PATZ1	100	98.399	ENSPPYG00000011732	PATZ1	100	98.399	Pongo_abelii
ENSLAFG00000002317	PATZ1	100	98.108	ENSPCOG00000019729	PATZ1	100	98.108	Propithecus_coquereli
ENSLAFG00000002317	PATZ1	100	98.836	ENSPVAG00000001749	PATZ1	100	98.836	Pteropus_vampyrus
ENSLAFG00000002317	PATZ1	100	60.000	ENSPNYG00000013542	patz1	100	60.000	Pundamilia_nyererei
ENSLAFG00000002317	PATZ1	86	60.130	ENSPNAG00000017222	patz1	99	60.065	Pygocentrus_nattereri
ENSLAFG00000002317	PATZ1	100	98.836	ENSRBIG00000044231	PATZ1	100	98.836	Rhinopithecus_bieti
ENSLAFG00000002317	PATZ1	100	98.836	ENSRROG00000037155	PATZ1	100	98.836	Rhinopithecus_roxellana
ENSLAFG00000002317	PATZ1	100	98.544	ENSSBOG00000003894	PATZ1	100	98.544	Saimiri_boliviensis_boliviensis
ENSLAFG00000002317	PATZ1	52	79.803	ENSSFOG00015013244	patz1	78	76.351	Scleropages_formosus
ENSLAFG00000002317	PATZ1	100	86.771	ENSSPUG00000015298	PATZ1	100	86.383	Sphenodon_punctatus
ENSLAFG00000002317	PATZ1	86	98.969	ENSSSCG00000010027	PATZ1	100	98.969	Sus_scrofa
ENSLAFG00000002317	PATZ1	100	58.790	ENSTRUG00000015366	patz1	100	58.790	Takifugu_rubripes
ENSLAFG00000002317	PATZ1	100	98.836	ENSTTRG00000010279	PATZ1	100	98.836	Tursiops_truncatus
ENSLAFG00000002317	PATZ1	100	92.576	ENSUAMG00000015014	PATZ1	100	92.576	Ursus_americanus
ENSLAFG00000002317	PATZ1	100	74.298	ENSXETG00000004190	patz1	100	74.298	Xenopus_tropicalis
ENSLAFG00000002317	PATZ1	100	55.493	ENSXMAG00000015531	patz1	100	55.634	Xiphophorus_maculatus