EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002383 (Gene tree)
Gene ID: -
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 15975 bases
Position: chrscaffold_11:43853860-43869834
Accession: 25502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000001995	TRM13	PF05206.14	5.5e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002383	TRMT13-201	1110	-	ENSLAFP00000001995	370 (aa)	-	G3SQC9

Gene Model

Click here to download ENSLAFG00000002383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002383's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002383	TRMT13	100	88.919	ENSG00000122435	TRMT13	77	88.919	Homo_sapiens
ENSLAFG00000002383	TRMT13	98	46.898	ENSAPOG00000015131	trmt13	80	47.015	Acanthochromis_polyacanthus
ENSLAFG00000002383	TRMT13	100	88.649	ENSAMEG00000008917	TRMT13	77	88.649	Ailuropoda_melanoleuca
ENSLAFG00000002383	TRMT13	97	50.532	ENSACIG00000005804	trmt13	78	50.131	Amphilophus_citrinellus
ENSLAFG00000002383	TRMT13	98	46.699	ENSAOCG00000023585	trmt13	80	46.699	Amphiprion_ocellaris
ENSLAFG00000002383	TRMT13	98	46.699	ENSAPEG00000004025	trmt13	80	46.699	Amphiprion_percula
ENSLAFG00000002383	TRMT13	98	48.936	ENSATEG00000006597	trmt13	76	49.067	Anabas_testudineus
ENSLAFG00000002383	TRMT13	99	65.054	ENSAPLG00000014924	TRMT13	86	65.054	Anas_platyrhynchos
ENSLAFG00000002383	TRMT13	99	63.587	ENSACAG00000003498	TRMT13	77	63.587	Anolis_carolinensis
ENSLAFG00000002383	TRMT13	100	88.378	ENSANAG00000019525	TRMT13	77	88.378	Aotus_nancymaae
ENSLAFG00000002383	TRMT13	98	53.100	ENSACLG00000020018	trmt13	77	53.100	Astatotilapia_calliptera
ENSLAFG00000002383	TRMT13	98	52.688	ENSAMXG00000017963	trmt13	77	52.688	Astyanax_mexicanus
ENSLAFG00000002383	TRMT13	100	88.378	ENSBTAG00000015781	TRMT13	77	88.378	Bos_taurus
ENSLAFG00000002383	TRMT13	100	85.946	ENSCJAG00000000200	TRMT13	90	91.729	Callithrix_jacchus
ENSLAFG00000002383	TRMT13	84	90.064	ENSCAFG00000020021	TRMT13	98	90.064	Canis_familiaris
ENSLAFG00000002383	TRMT13	100	88.378	ENSCHIG00000015395	TRMT13	77	88.378	Capra_hircus
ENSLAFG00000002383	TRMT13	100	77.688	ENSTSYG00000010811	TRMT13	78	78.016	Carlito_syrichta
ENSLAFG00000002383	TRMT13	64	78.151	ENSCAPG00000009085	TRMT13	85	67.314	Cavia_aperea
ENSLAFG00000002383	TRMT13	100	84.054	ENSCPOG00000000694	TRMT13	77	84.054	Cavia_porcellus
ENSLAFG00000002383	TRMT13	100	88.649	ENSCCAG00000023772	TRMT13	77	88.649	Cebus_capucinus
ENSLAFG00000002383	TRMT13	100	88.378	ENSCATG00000033556	TRMT13	77	88.378	Cercocebus_atys
ENSLAFG00000002383	TRMT13	100	80.270	ENSCLAG00000008220	TRMT13	86	81.351	Chinchilla_lanigera
ENSLAFG00000002383	TRMT13	100	88.919	ENSCSAG00000001506	TRMT13	77	88.919	Chlorocebus_sabaeus
ENSLAFG00000002383	TRMT13	100	69.730	ENSCPBG00000026671	TRMT13	85	65.172	Chrysemys_picta_bellii
ENSLAFG00000002383	TRMT13	100	88.919	ENSCANG00000034659	TRMT13	77	88.919	Colobus_angolensis_palliatus
ENSLAFG00000002383	TRMT13	100	84.054	ENSCGRG00001021601	Trmt13	77	84.054	Cricetulus_griseus_chok1gshd
ENSLAFG00000002383	TRMT13	69	81.176	ENSCGRG00000000093	-	98	81.176	Cricetulus_griseus_crigri
ENSLAFG00000002383	TRMT13	98	49.036	ENSCSEG00000000591	trmt13	75	49.444	Cynoglossus_semilaevis
ENSLAFG00000002383	TRMT13	98	48.285	ENSCVAG00000017342	trmt13	74	49.077	Cyprinodon_variegatus
ENSLAFG00000002383	TRMT13	98	55.827	ENSDARG00000102846	trmt13	76	55.827	Danio_rerio
ENSLAFG00000002383	TRMT13	99	83.967	ENSDORG00000015808	Trmt13	76	83.967	Dipodomys_ordii
ENSLAFG00000002383	TRMT13	94	78.324	ENSETEG00000005819	TRMT13	72	78.324	Echinops_telfairi
ENSLAFG00000002383	TRMT13	97	44.865	ENSEBUG00000014444	trmt13	88	44.865	Eptatretus_burgeri
ENSLAFG00000002383	TRMT13	100	89.189	ENSEASG00005015918	TRMT13	77	89.189	Equus_asinus_asinus
ENSLAFG00000002383	TRMT13	100	89.189	ENSECAG00000022626	TRMT13	77	89.189	Equus_caballus
ENSLAFG00000002383	TRMT13	74	75.000	ENSEEUG00000000294	TRMT13	57	75.000	Erinaceus_europaeus
ENSLAFG00000002383	TRMT13	99	54.178	ENSELUG00000003803	trmt13	77	53.763	Esox_lucius
ENSLAFG00000002383	TRMT13	100	88.649	ENSFCAG00000030618	TRMT13	77	88.649	Felis_catus
ENSLAFG00000002383	TRMT13	100	65.135	ENSFALG00000002424	TRMT13	77	65.135	Ficedula_albicollis
ENSLAFG00000002383	TRMT13	99	85.326	ENSFDAG00000006342	TRMT13	76	85.326	Fukomys_damarensis
ENSLAFG00000002383	TRMT13	74	52.595	ENSFHEG00000022954	trmt13	77	52.131	Fundulus_heteroclitus
ENSLAFG00000002383	TRMT13	96	47.899	ENSGMOG00000013223	trmt13	77	48.459	Gadus_morhua
ENSLAFG00000002383	TRMT13	99	66.485	ENSGALG00000005290	TRMT13	76	66.393	Gallus_gallus
ENSLAFG00000002383	TRMT13	72	49.638	ENSGAFG00000001577	trmt13	59	49.638	Gambusia_affinis
ENSLAFG00000002383	TRMT13	99	48.794	ENSGACG00000013428	trmt13	78	49.598	Gasterosteus_aculeatus
ENSLAFG00000002383	TRMT13	100	69.459	ENSGAGG00000023303	TRMT13	77	69.459	Gopherus_agassizii
ENSLAFG00000002383	TRMT13	100	88.919	ENSGGOG00000005616	TRMT13	77	88.919	Gorilla_gorilla
ENSLAFG00000002383	TRMT13	98	53.639	ENSHBUG00000007754	trmt13	77	53.639	Haplochromis_burtoni
ENSLAFG00000002383	TRMT13	99	85.598	ENSHGLG00000002164	TRMT13	76	85.598	Heterocephalus_glaber_female
ENSLAFG00000002383	TRMT13	99	85.598	ENSHGLG00100001618	TRMT13	76	85.598	Heterocephalus_glaber_male
ENSLAFG00000002383	TRMT13	95	47.875	ENSHCOG00000020553	trmt13	73	47.875	Hippocampus_comes
ENSLAFG00000002383	TRMT13	98	54.121	ENSIPUG00000024787	trmt13	77	54.121	Ictalurus_punctatus
ENSLAFG00000002383	TRMT13	100	88.649	ENSSTOG00000013483	TRMT13	77	88.649	Ictidomys_tridecemlineatus
ENSLAFG00000002383	TRMT13	100	84.865	ENSJJAG00000018012	Trmt13	78	84.865	Jaculus_jaculus
ENSLAFG00000002383	TRMT13	84	52.396	ENSKMAG00000007639	trmt13	92	52.396	Kryptolebias_marmoratus
ENSLAFG00000002383	TRMT13	98	48.148	ENSLBEG00000020238	trmt13	78	48.294	Labrus_bergylta
ENSLAFG00000002383	TRMT13	99	59.299	ENSLACG00000013153	TRMT13	92	59.299	Latimeria_chalumnae
ENSLAFG00000002383	TRMT13	99	54.987	ENSLOCG00000000418	trmt13	77	54.987	Lepisosteus_oculatus
ENSLAFG00000002383	TRMT13	100	88.108	ENSMFAG00000034681	TRMT13	77	88.108	Macaca_fascicularis
ENSLAFG00000002383	TRMT13	100	88.108	ENSMMUG00000004243	TRMT13	77	88.108	Macaca_mulatta
ENSLAFG00000002383	TRMT13	100	88.108	ENSMNEG00000036102	TRMT13	77	88.108	Macaca_nemestrina
ENSLAFG00000002383	TRMT13	100	88.378	ENSMLEG00000034258	TRMT13	77	88.378	Mandrillus_leucophaeus
ENSLAFG00000002383	TRMT13	98	50.402	ENSMAMG00000016597	trmt13	80	50.402	Mastacembelus_armatus
ENSLAFG00000002383	TRMT13	98	53.100	ENSMZEG00005020959	trmt13	77	53.100	Maylandia_zebra
ENSLAFG00000002383	TRMT13	99	65.940	ENSMGAG00000006970	TRMT13	86	65.940	Meleagris_gallopavo
ENSLAFG00000002383	TRMT13	98	82.920	ENSMAUG00000010448	Trmt13	75	82.920	Mesocricetus_auratus
ENSLAFG00000002383	TRMT13	100	89.459	ENSMICG00000005283	TRMT13	77	89.459	Microcebus_murinus
ENSLAFG00000002383	TRMT13	100	79.730	ENSMOCG00000019914	Trmt13	77	79.730	Microtus_ochrogaster
ENSLAFG00000002383	TRMT13	100	74.054	ENSMODG00000003646	TRMT13	76	74.054	Monodelphis_domestica
ENSLAFG00000002383	TRMT13	98	50.272	ENSMALG00000020965	trmt13	76	50.272	Monopterus_albus
ENSLAFG00000002383	TRMT13	100	82.973	MGP_CAROLIEiJ_G0025568	Trmt13	77	82.973	Mus_caroli
ENSLAFG00000002383	TRMT13	100	83.784	ENSMUSG00000033439	Trmt13	77	83.784	Mus_musculus
ENSLAFG00000002383	TRMT13	100	84.595	MGP_PahariEiJ_G0027014	Trmt13	77	84.595	Mus_pahari
ENSLAFG00000002383	TRMT13	100	83.784	MGP_SPRETEiJ_G0026518	Trmt13	77	83.784	Mus_spretus
ENSLAFG00000002383	TRMT13	100	86.216	ENSMPUG00000002078	-	97	86.216	Mustela_putorius_furo
ENSLAFG00000002383	TRMT13	99	73.770	ENSMLUG00000002124	TRMT13	76	73.770	Myotis_lucifugus
ENSLAFG00000002383	TRMT13	98	49.865	ENSNBRG00000006783	trmt13	75	49.865	Neolamprologus_brichardi
ENSLAFG00000002383	TRMT13	100	88.378	ENSNLEG00000035917	TRMT13	77	88.378	Nomascus_leucogenys
ENSLAFG00000002383	TRMT13	98	53.908	ENSONIG00000004574	trmt13	77	53.908	Oreochromis_niloticus
ENSLAFG00000002383	TRMT13	100	72.507	ENSOANG00000012057	TRMT13	85	72.507	Ornithorhynchus_anatinus
ENSLAFG00000002383	TRMT13	100	87.297	ENSOCUG00000023095	TRMT13	77	87.297	Oryctolagus_cuniculus
ENSLAFG00000002383	TRMT13	94	50.704	ENSORLG00000003320	trmt13	77	50.820	Oryzias_latipes
ENSLAFG00000002383	TRMT13	92	50.716	ENSORLG00020005972	trmt13	77	50.811	Oryzias_latipes_hni
ENSLAFG00000002383	TRMT13	94	51.695	ENSORLG00015002270	trmt13	78	51.200	Oryzias_latipes_hsok
ENSLAFG00000002383	TRMT13	94	50.847	ENSOMEG00000006724	trmt13	76	50.141	Oryzias_melastigma
ENSLAFG00000002383	TRMT13	98	89.011	ENSOGAG00000005618	TRMT13	75	88.919	Otolemur_garnettii
ENSLAFG00000002383	TRMT13	100	88.378	ENSOARG00000017983	TRMT13	77	88.378	Ovis_aries
ENSLAFG00000002383	TRMT13	100	88.108	ENSPPAG00000043736	TRMT13	77	88.108	Pan_paniscus
ENSLAFG00000002383	TRMT13	100	89.189	ENSPPRG00000003424	TRMT13	77	89.189	Panthera_pardus
ENSLAFG00000002383	TRMT13	100	89.189	ENSPTIG00000018598	TRMT13	77	89.189	Panthera_tigris_altaica
ENSLAFG00000002383	TRMT13	100	88.378	ENSPTRG00000001001	TRMT13	77	88.378	Pan_troglodytes
ENSLAFG00000002383	TRMT13	100	88.649	ENSPANG00000007598	TRMT13	77	88.649	Papio_anubis
ENSLAFG00000002383	TRMT13	99	53.763	ENSPKIG00000001514	trmt13	77	53.763	Paramormyrops_kingsleyae
ENSLAFG00000002383	TRMT13	92	68.732	ENSPSIG00000012703	TRMT13	81	68.732	Pelodiscus_sinensis
ENSLAFG00000002383	TRMT13	93	53.026	ENSPMGG00000013298	trmt13	73	53.026	Periophthalmus_magnuspinnatus
ENSLAFG00000002383	TRMT13	100	80.811	ENSPEMG00000000275	Trmt13	77	80.811	Peromyscus_maniculatus_bairdii
ENSLAFG00000002383	TRMT13	98	44.327	ENSPMAG00000000823	trmt13	76	44.327	Petromyzon_marinus
ENSLAFG00000002383	TRMT13	99	75.610	ENSPCIG00000007699	TRMT13	76	75.610	Phascolarctos_cinereus
ENSLAFG00000002383	TRMT13	98	49.725	ENSPFOG00000008675	trmt13	75	49.725	Poecilia_formosa
ENSLAFG00000002383	TRMT13	98	47.861	ENSPLAG00000009709	trmt13	78	47.861	Poecilia_latipinna
ENSLAFG00000002383	TRMT13	98	47.312	ENSPMEG00000022954	trmt13	78	47.312	Poecilia_mexicana
ENSLAFG00000002383	TRMT13	75	50.350	ENSPREG00000005645	trmt13	55	56.051	Poecilia_reticulata
ENSLAFG00000002383	TRMT13	100	88.649	ENSPPYG00000001120	TRMT13	77	88.649	Pongo_abelii
ENSLAFG00000002383	TRMT13	100	90.270	ENSPCAG00000002340	TRMT13	77	90.270	Procavia_capensis
ENSLAFG00000002383	TRMT13	100	88.649	ENSPCOG00000017984	TRMT13	77	88.649	Propithecus_coquereli
ENSLAFG00000002383	TRMT13	100	88.919	ENSPVAG00000017430	TRMT13	77	88.919	Pteropus_vampyrus
ENSLAFG00000002383	TRMT13	98	53.639	ENSPNYG00000013690	trmt13	81	53.639	Pundamilia_nyererei
ENSLAFG00000002383	TRMT13	98	52.861	ENSPNAG00000022130	trmt13	77	52.861	Pygocentrus_nattereri
ENSLAFG00000002383	TRMT13	100	84.054	ENSRNOG00000015140	Trmt13	75	84.054	Rattus_norvegicus
ENSLAFG00000002383	TRMT13	100	88.919	ENSRBIG00000037686	TRMT13	77	88.919	Rhinopithecus_bieti
ENSLAFG00000002383	TRMT13	100	88.919	ENSRROG00000044057	TRMT13	80	88.919	Rhinopithecus_roxellana
ENSLAFG00000002383	TRMT13	100	88.378	ENSSBOG00000026541	TRMT13	77	88.378	Saimiri_boliviensis_boliviensis
ENSLAFG00000002383	TRMT13	100	76.216	ENSSHAG00000005213	TRMT13	82	76.216	Sarcophilus_harrisii
ENSLAFG00000002383	TRMT13	99	51.351	ENSSFOG00015017560	trmt13	77	51.351	Scleropages_formosus
ENSLAFG00000002383	TRMT13	98	49.735	ENSSMAG00000014592	trmt13	83	49.735	Scophthalmus_maximus
ENSLAFG00000002383	TRMT13	96	51.613	ENSSDUG00000015508	trmt13	75	51.724	Seriola_dumerili
ENSLAFG00000002383	TRMT13	98	50.928	ENSSLDG00000019060	trmt13	76	50.928	Seriola_lalandi_dorsalis
ENSLAFG00000002383	TRMT13	100	71.892	ENSSARG00000010344	TRMT13	78	71.892	Sorex_araneus
ENSLAFG00000002383	TRMT13	99	68.392	ENSSPUG00000016339	TRMT13	80	68.392	Sphenodon_punctatus
ENSLAFG00000002383	TRMT13	98	50.667	ENSSPAG00000011922	trmt13	79	50.789	Stegastes_partitus
ENSLAFG00000002383	TRMT13	100	89.189	ENSSSCG00000006869	TRMT13	80	89.189	Sus_scrofa
ENSLAFG00000002383	TRMT13	100	65.676	ENSTGUG00000005253	TRMT13	79	65.676	Taeniopygia_guttata
ENSLAFG00000002383	TRMT13	98	50.272	ENSTRUG00000008400	trmt13	78	50.266	Takifugu_rubripes
ENSLAFG00000002383	TRMT13	100	70.270	ENSTBEG00000008911	TRMT13	89	70.270	Tupaia_belangeri
ENSLAFG00000002383	TRMT13	92	88.529	ENSUAMG00000017251	TRMT13	73	88.529	Ursus_americanus
ENSLAFG00000002383	TRMT13	100	88.378	ENSUMAG00000007901	TRMT13	85	88.378	Ursus_maritimus
ENSLAFG00000002383	TRMT13	85	80.635	ENSVPAG00000001034	TRMT13	73	80.635	Vicugna_pacos
ENSLAFG00000002383	TRMT13	100	89.730	ENSVVUG00000021996	TRMT13	77	89.730	Vulpes_vulpes
ENSLAFG00000002383	TRMT13	98	53.719	ENSXETG00000013204	trmt13	76	53.719	Xenopus_tropicalis
ENSLAFG00000002383	TRMT13	98	46.524	ENSXMAG00000010765	trmt13	78	46.524	Xiphophorus_maculatus