EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002567 (Gene tree)
Gene ID: -
Gene Symbol: TDP2
Alias: TTRAP
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 35328 bases
Position: chrscaffold_44:2362968-2398295
Accession: 17768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002142	Exo_endo_phos	PF03372.23	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002565	TDP2-201	1059	-	ENSLAFP00000002142	352 (aa)	-	G3SQQ4

Gene Model

Click here to download ENSLAFG00000002567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002567	TDP2	97	87.097	ENSG00000111802	TDP2	94	87.097	Homo_sapiens
ENSLAFG00000002567	TDP2	72	55.078	ENSAPOG00000018379	-	89	55.078	Acanthochromis_polyacanthus
ENSLAFG00000002567	TDP2	79	85.971	ENSAMEG00000010230	TDP2	99	85.971	Ailuropoda_melanoleuca
ENSLAFG00000002567	TDP2	52	53.261	ENSAOCG00000010081	-	81	53.261	Amphiprion_ocellaris
ENSLAFG00000002567	TDP2	73	53.077	ENSAPEG00000004208	-	93	53.077	Amphiprion_percula
ENSLAFG00000002567	TDP2	71	50.988	ENSATEG00000010663	-	82	50.988	Anabas_testudineus
ENSLAFG00000002567	TDP2	95	66.567	ENSACAG00000002332	TDP2	92	66.272	Anolis_carolinensis
ENSLAFG00000002567	TDP2	97	86.589	ENSANAG00000020033	TDP2	94	86.804	Aotus_nancymaae
ENSLAFG00000002567	TDP2	82	48.980	ENSACLG00000016174	tdp2b	99	48.980	Astatotilapia_calliptera
ENSLAFG00000002567	TDP2	73	55.344	ENSACLG00000016148	tdp2b	93	55.344	Astatotilapia_calliptera
ENSLAFG00000002567	TDP2	82	49.320	ENSACLG00000016132	tdp2b	99	49.320	Astatotilapia_calliptera
ENSLAFG00000002567	TDP2	98	51.444	ENSAMXG00000011775	tdp2b	95	52.603	Astyanax_mexicanus
ENSLAFG00000002567	TDP2	73	51.163	ENSAMXG00000036549	tdp2a	89	49.270	Astyanax_mexicanus
ENSLAFG00000002567	TDP2	97	83.965	ENSBTAG00000000365	TDP2	94	83.965	Bos_taurus
ENSLAFG00000002567	TDP2	92	30.091	WBGene00013405	tdpt-1	85	30.091	Caenorhabditis_elegans
ENSLAFG00000002567	TDP2	99	85.755	ENSCJAG00000006074	TDP2	99	82.060	Callithrix_jacchus
ENSLAFG00000002567	TDP2	99	84.615	ENSCJAG00000021963	-	94	85.044	Callithrix_jacchus
ENSLAFG00000002567	TDP2	99	81.375	ENSCAFG00000010428	TDP2	96	87.050	Canis_familiaris
ENSLAFG00000002567	TDP2	79	87.050	ENSCAFG00020009994	TDP2	96	87.050	Canis_lupus_dingo
ENSLAFG00000002567	TDP2	84	81.667	ENSCHIG00000015294	-	97	84.028	Capra_hircus
ENSLAFG00000002567	TDP2	88	86.084	ENSTSYG00000037199	TDP2	100	86.084	Carlito_syrichta
ENSLAFG00000002567	TDP2	97	86.176	ENSCPOG00000006390	TDP2	95	85.924	Cavia_porcellus
ENSLAFG00000002567	TDP2	99	86.895	ENSCCAG00000022734	TDP2	94	87.390	Cebus_capucinus
ENSLAFG00000002567	TDP2	97	87.390	ENSCATG00000022076	TDP2	91	88.489	Cercocebus_atys
ENSLAFG00000002567	TDP2	99	84.330	ENSCLAG00000002072	TDP2	95	85.337	Chinchilla_lanigera
ENSLAFG00000002567	TDP2	99	87.143	ENSCSAG00000007769	TDP2	95	87.390	Chlorocebus_sabaeus
ENSLAFG00000002567	TDP2	97	69.679	ENSCPBG00000006551	TDP2	87	69.795	Chrysemys_picta_bellii
ENSLAFG00000002567	TDP2	97	87.390	ENSCANG00000040122	TDP2	95	87.390	Colobus_angolensis_palliatus
ENSLAFG00000002567	TDP2	97	69.208	ENSCGRG00001000384	Tdp2	92	69.208	Cricetulus_griseus_chok1gshd
ENSLAFG00000002567	TDP2	97	67.155	ENSCGRG00000010250	Tdp2	94	67.742	Cricetulus_griseus_crigri
ENSLAFG00000002567	TDP2	95	52.841	ENSCVAG00000003114	tdp2b	95	53.409	Cyprinodon_variegatus
ENSLAFG00000002567	TDP2	95	51.099	ENSDARG00000035954	tdp2b	94	51.099	Danio_rerio
ENSLAFG00000002567	TDP2	70	49.796	ENSDARG00000069941	tdp2a	55	49.796	Danio_rerio
ENSLAFG00000002567	TDP2	99	85.755	ENSDNOG00000044082	TDP2	93	86.804	Dasypus_novemcinctus
ENSLAFG00000002567	TDP2	79	87.050	ENSETEG00000019096	TDP2	100	87.050	Echinops_telfairi
ENSLAFG00000002567	TDP2	72	54.118	ENSEBUG00000006535	tdp2a	59	54.118	Eptatretus_burgeri
ENSLAFG00000002567	TDP2	97	86.804	ENSEASG00005007656	TDP2	94	86.804	Equus_asinus_asinus
ENSLAFG00000002567	TDP2	97	86.804	ENSECAG00000014264	TDP2	94	86.804	Equus_caballus
ENSLAFG00000002567	TDP2	97	79.765	ENSEEUG00000010776	TDP2	94	79.765	Erinaceus_europaeus
ENSLAFG00000002567	TDP2	85	44.118	ENSELUG00000009321	tdp2a	86	46.931	Esox_lucius
ENSLAFG00000002567	TDP2	95	53.591	ENSELUG00000016449	tdp2b	95	53.591	Esox_lucius
ENSLAFG00000002567	TDP2	99	84.900	ENSFCAG00000025612	TDP2	94	85.337	Felis_catus
ENSLAFG00000002567	TDP2	97	60.411	ENSFALG00000004710	TDP2	94	60.526	Ficedula_albicollis
ENSLAFG00000002567	TDP2	80	87.143	ENSFDAG00000006512	TDP2	97	87.143	Fukomys_damarensis
ENSLAFG00000002567	TDP2	73	50.192	ENSFHEG00000013560	-	88	50.192	Fundulus_heteroclitus
ENSLAFG00000002567	TDP2	97	65.205	ENSGALG00000013637	TDP2	92	65.497	Gallus_gallus
ENSLAFG00000002567	TDP2	99	68.661	ENSGAGG00000002853	TDP2	87	69.501	Gopherus_agassizii
ENSLAFG00000002567	TDP2	97	86.804	ENSGGOG00000014237	TDP2	94	86.804	Gorilla_gorilla
ENSLAFG00000002567	TDP2	95	54.131	ENSHBUG00000002714	tdp2b	95	54.131	Haplochromis_burtoni
ENSLAFG00000002567	TDP2	58	58.252	ENSHBUG00000005421	-	86	58.252	Haplochromis_burtoni
ENSLAFG00000002567	TDP2	99	83.761	ENSHGLG00000008655	TDP2	95	84.164	Heterocephalus_glaber_female
ENSLAFG00000002567	TDP2	99	83.761	ENSHGLG00100019087	TDP2	95	84.164	Heterocephalus_glaber_male
ENSLAFG00000002567	TDP2	95	53.073	ENSIPUG00000013691	tdp2b	94	53.073	Ictalurus_punctatus
ENSLAFG00000002567	TDP2	96	66.272	ENSJJAG00000021685	Tdp2	97	66.272	Jaculus_jaculus
ENSLAFG00000002567	TDP2	76	51.292	ENSKMAG00000015485	-	84	51.292	Kryptolebias_marmoratus
ENSLAFG00000002567	TDP2	97	60.458	ENSLACG00000008852	TDP2	95	60.458	Latimeria_chalumnae
ENSLAFG00000002567	TDP2	79	60.289	ENSLOCG00000005817	tdp2b	99	60.289	Lepisosteus_oculatus
ENSLAFG00000002567	TDP2	97	87.097	ENSMFAG00000045296	TDP2	95	87.097	Macaca_fascicularis
ENSLAFG00000002567	TDP2	97	87.097	ENSMMUG00000009803	TDP2	95	87.097	Macaca_mulatta
ENSLAFG00000002567	TDP2	97	87.097	ENSMNEG00000038003	TDP2	95	87.097	Macaca_nemestrina
ENSLAFG00000002567	TDP2	97	86.804	ENSMLEG00000028883	TDP2	95	86.804	Mandrillus_leucophaeus
ENSLAFG00000002567	TDP2	94	54.467	ENSMAMG00000013654	tdp2b	94	54.441	Mastacembelus_armatus
ENSLAFG00000002567	TDP2	74	55.263	ENSMZEG00005004077	tdp2b	90	55.263	Maylandia_zebra
ENSLAFG00000002567	TDP2	73	49.618	ENSMZEG00005004103	tdp2b	88	49.618	Maylandia_zebra
ENSLAFG00000002567	TDP2	76	53.333	ENSMZEG00005004153	tdp2b	95	53.333	Maylandia_zebra
ENSLAFG00000002567	TDP2	69	53.252	ENSMZEG00005004055	tdp2b	81	53.252	Maylandia_zebra
ENSLAFG00000002567	TDP2	82	48.973	ENSMZEG00005004126	tdp2b	99	48.973	Maylandia_zebra
ENSLAFG00000002567	TDP2	95	53.561	ENSMZEG00005003950	tdp2b	95	53.561	Maylandia_zebra
ENSLAFG00000002567	TDP2	74	47.744	ENSMZEG00005003980	-	86	47.744	Maylandia_zebra
ENSLAFG00000002567	TDP2	97	66.862	ENSMGAG00000008014	TDP2	91	66.862	Meleagris_gallopavo
ENSLAFG00000002567	TDP2	97	68.915	ENSMAUG00000014451	Tdp2	92	68.915	Mesocricetus_auratus
ENSLAFG00000002567	TDP2	99	88.000	ENSMICG00000000039	TDP2	95	88.172	Microcebus_murinus
ENSLAFG00000002567	TDP2	97	69.795	ENSMOCG00000002823	Tdp2	92	69.795	Microtus_ochrogaster
ENSLAFG00000002567	TDP2	87	67.937	ENSMODG00000011653	TDP2	95	68.167	Monodelphis_domestica
ENSLAFG00000002567	TDP2	70	52.800	ENSMALG00000005368	-	84	52.800	Monopterus_albus
ENSLAFG00000002567	TDP2	99	68.588	MGP_CAROLIEiJ_G0018354	Tdp2	91	69.208	Mus_caroli
ENSLAFG00000002567	TDP2	97	69.501	ENSMUSG00000035958	Tdp2	91	69.501	Mus_musculus
ENSLAFG00000002567	TDP2	99	66.571	MGP_PahariEiJ_G0019417	Tdp2	91	66.862	Mus_pahari
ENSLAFG00000002567	TDP2	100	68.750	MGP_SPRETEiJ_G0019220	Tdp2	91	69.208	Mus_spretus
ENSLAFG00000002567	TDP2	97	82.507	ENSMPUG00000004516	TDP2	95	82.507	Mustela_putorius_furo
ENSLAFG00000002567	TDP2	100	72.805	ENSMLUG00000013506	TDP2	94	74.412	Myotis_lucifugus
ENSLAFG00000002567	TDP2	99	65.706	ENSNGAG00000001375	Tdp2	92	66.176	Nannospalax_galili
ENSLAFG00000002567	TDP2	98	87.791	ENSNLEG00000002447	TDP2	96	87.683	Nomascus_leucogenys
ENSLAFG00000002567	TDP2	99	80.980	ENSOPRG00000016299	TDP2	97	81.232	Ochotona_princeps
ENSLAFG00000002567	TDP2	81	87.368	ENSODEG00000014018	TDP2	97	87.368	Octodon_degus
ENSLAFG00000002567	TDP2	99	85.303	ENSOCUG00000013773	TDP2	94	85.630	Oryctolagus_cuniculus
ENSLAFG00000002567	TDP2	74	48.864	ENSORLG00000001661	-	96	48.864	Oryzias_latipes
ENSLAFG00000002567	TDP2	74	48.864	ENSORLG00020004634	-	96	48.864	Oryzias_latipes_hni
ENSLAFG00000002567	TDP2	75	43.820	ENSORLG00015008190	-	97	43.071	Oryzias_latipes_hsok
ENSLAFG00000002567	TDP2	84	45.973	ENSOMEG00000015899	-	92	50.806	Oryzias_melastigma
ENSLAFG00000002567	TDP2	99	88.000	ENSOGAG00000025303	TDP2	93	88.563	Otolemur_garnettii
ENSLAFG00000002567	TDP2	97	86.804	ENSPPAG00000029023	TDP2	94	86.804	Pan_paniscus
ENSLAFG00000002567	TDP2	99	84.330	ENSPPRG00000015398	TDP2	94	84.751	Panthera_pardus
ENSLAFG00000002567	TDP2	79	86.691	ENSPTIG00000018574	TDP2	95	86.691	Panthera_tigris_altaica
ENSLAFG00000002567	TDP2	97	86.804	ENSPTRG00000017778	TDP2	94	86.804	Pan_troglodytes
ENSLAFG00000002567	TDP2	97	87.097	ENSPANG00000017590	TDP2	95	87.097	Papio_anubis
ENSLAFG00000002567	TDP2	95	55.114	ENSPKIG00000006483	tdp2b	95	55.114	Paramormyrops_kingsleyae
ENSLAFG00000002567	TDP2	83	69.521	ENSPSIG00000004948	TDP2	100	69.521	Pelodiscus_sinensis
ENSLAFG00000002567	TDP2	97	70.349	ENSPEMG00000001788	Tdp2	91	70.349	Peromyscus_maniculatus_bairdii
ENSLAFG00000002567	TDP2	71	48.315	ENSPMAG00000001570	tdp2b	97	48.315	Petromyzon_marinus
ENSLAFG00000002567	TDP2	97	68.328	ENSPCIG00000007316	TDP2	89	68.328	Phascolarctos_cinereus
ENSLAFG00000002567	TDP2	82	45.392	ENSPFOG00000017990	-	98	45.392	Poecilia_formosa
ENSLAFG00000002567	TDP2	74	48.106	ENSPLAG00000019439	-	82	48.106	Poecilia_latipinna
ENSLAFG00000002567	TDP2	70	50.800	ENSPMEG00000010824	-	84	50.800	Poecilia_mexicana
ENSLAFG00000002567	TDP2	97	86.217	ENSPPYG00000016282	TDP2	87	86.217	Pongo_abelii
ENSLAFG00000002567	TDP2	97	88.824	ENSPCOG00000021415	TDP2	98	88.849	Propithecus_coquereli
ENSLAFG00000002567	TDP2	76	49.650	ENSPNYG00000011504	tdp2b	93	49.650	Pundamilia_nyererei
ENSLAFG00000002567	TDP2	50	50.279	ENSPNYG00000001944	-	69	51.807	Pundamilia_nyererei
ENSLAFG00000002567	TDP2	95	52.707	ENSPNYG00000011532	tdp2b	95	52.707	Pundamilia_nyererei
ENSLAFG00000002567	TDP2	72	52.549	ENSPNAG00000022162	tdp2a	65	52.549	Pygocentrus_nattereri
ENSLAFG00000002567	TDP2	97	69.591	ENSRNOG00000018246	Tdp2	92	69.795	Rattus_norvegicus
ENSLAFG00000002567	TDP2	97	87.097	ENSRBIG00000037119	TDP2	95	87.097	Rhinopithecus_bieti
ENSLAFG00000002567	TDP2	97	87.097	ENSRROG00000005025	TDP2	92	87.770	Rhinopithecus_roxellana
ENSLAFG00000002567	TDP2	99	86.610	ENSSBOG00000028734	TDP2	91	88.849	Saimiri_boliviensis_boliviensis
ENSLAFG00000002567	TDP2	99	67.324	ENSSHAG00000002506	TDP2	91	68.129	Sarcophilus_harrisii
ENSLAFG00000002567	TDP2	74	51.341	ENSSFOG00015011322	-	73	51.341	Scleropages_formosus
ENSLAFG00000002567	TDP2	79	74.552	ENSSARG00000013547	TDP2	100	74.552	Sorex_araneus
ENSLAFG00000002567	TDP2	97	65.714	ENSSPUG00000008288	TDP2	95	65.714	Sphenodon_punctatus
ENSLAFG00000002567	TDP2	97	86.217	ENSSSCG00000001092	TDP2	94	86.217	Sus_scrofa
ENSLAFG00000002567	TDP2	73	69.531	ENSTGUG00000009035	TDP2	98	69.531	Taeniopygia_guttata
ENSLAFG00000002567	TDP2	70	54.800	ENSTRUG00000012218	-	87	54.800	Takifugu_rubripes
ENSLAFG00000002567	TDP2	95	52.991	ENSTRUG00000014347	tdp2b	96	52.691	Takifugu_rubripes
ENSLAFG00000002567	TDP2	97	52.113	ENSTNIG00000017792	tdp2b	96	52.113	Tetraodon_nigroviridis
ENSLAFG00000002567	TDP2	73	54.231	ENSTNIG00000010260	TDP2	98	54.231	Tetraodon_nigroviridis
ENSLAFG00000002567	TDP2	97	85.924	ENSTTRG00000016376	TDP2	94	85.924	Tursiops_truncatus
ENSLAFG00000002567	TDP2	99	78.348	ENSUAMG00000025939	TDP2	95	78.886	Ursus_americanus
ENSLAFG00000002567	TDP2	79	85.612	ENSUMAG00000020111	TDP2	93	85.612	Ursus_maritimus
ENSLAFG00000002567	TDP2	99	63.712	ENSXETG00000014826	tdp2	95	64.225	Xenopus_tropicalis
ENSLAFG00000002567	TDP2	70	51.394	ENSXCOG00000010778	-	69	51.394	Xiphophorus_couchianus
ENSLAFG00000002567	TDP2	70	51.394	ENSXMAG00000022252	-	72	51.394	Xiphophorus_maculatus