EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002784 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 8508 bases
Position: chrscaffold_15:51395954-51404461
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022311	Methyltr_RsmB-F	PF01189.17	8.7e-84	1	1
ENSLAFP00000002332	Methyltr_RsmB-F	PF01189.17	8.7e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002785	-	2427	-	ENSLAFP00000002332	809 (aa)	-	G3SR53
ENSLAFT00000037183	-	2427	-	ENSLAFP00000022311	809 (aa)	-	G3U3A3

Gene Model

Click here to download ENSLAFG00000002784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002784	-	58	68.973	ENSAPOG00000023186	nop2	87	60.000	Acanthochromis_polyacanthus
ENSLAFG00000002784	-	99	82.289	ENSAMEG00000014268	-	99	81.928	Ailuropoda_melanoleuca
ENSLAFG00000002784	-	55	71.655	ENSACIG00000011803	nop2	80	62.081	Amphilophus_citrinellus
ENSLAFG00000002784	-	55	71.429	ENSAPEG00000011152	nop2	85	62.540	Amphiprion_percula
ENSLAFG00000002784	-	80	63.181	ENSACAG00000006397	-	96	62.717	Anolis_carolinensis
ENSLAFG00000002784	-	72	63.333	ENSAMXG00000018985	nop2	81	62.540	Astyanax_mexicanus
ENSLAFG00000002784	-	100	82.646	ENSBTAG00000014733	NOP2	99	82.767	Bos_taurus
ENSLAFG00000002784	-	100	81.055	ENSCAFG00000015034	NOP2	100	80.695	Canis_familiaris
ENSLAFG00000002784	-	100	81.423	ENSCAFG00020002884	-	100	81.062	Canis_lupus_dingo
ENSLAFG00000002784	-	100	82.822	ENSCHIG00000018560	-	99	82.454	Capra_hircus
ENSLAFG00000002784	-	99	73.567	ENSTSYG00000006030	-	100	74.091	Carlito_syrichta
ENSLAFG00000002784	-	93	65.699	ENSCAPG00000011953	-	90	79.699	Cavia_aperea
ENSLAFG00000002784	-	99	77.695	ENSCPOG00000020690	-	99	77.571	Cavia_porcellus
ENSLAFG00000002784	-	100	77.887	ENSCLAG00000014440	-	100	78.010	Chinchilla_lanigera
ENSLAFG00000002784	-	99	81.378	ENSCSAG00000010484	-	99	81.016	Chlorocebus_sabaeus
ENSLAFG00000002784	-	52	85.294	ENSCPBG00000027725	-	78	85.294	Chrysemys_picta_bellii
ENSLAFG00000002784	-	99	82.646	ENSCANG00000038803	-	99	82.282	Colobus_angolensis_palliatus
ENSLAFG00000002784	-	99	77.723	ENSCGRG00001020970	Nop2	100	77.475	Cricetulus_griseus_chok1gshd
ENSLAFG00000002784	-	99	77.723	ENSCGRG00000015782	Nop2	100	77.475	Cricetulus_griseus_crigri
ENSLAFG00000002784	-	55	64.253	ENSCSEG00000020126	nop2	82	56.601	Cynoglossus_semilaevis
ENSLAFG00000002784	-	80	57.775	ENSCVAG00000001162	nop2	88	58.858	Cyprinodon_variegatus
ENSLAFG00000002784	-	72	64.883	ENSDARG00000043304	nop2	80	64.677	Danio_rerio
ENSLAFG00000002784	-	98	77.423	ENSDNOG00000001133	-	100	77.229	Dasypus_novemcinctus
ENSLAFG00000002784	-	81	79.184	ENSETEG00000005909	-	80	78.571	Echinops_telfairi
ENSLAFG00000002784	-	100	83.961	ENSEASG00005016153	-	100	83.111	Equus_asinus_asinus
ENSLAFG00000002784	-	100	83.252	ENSECAG00000012639	NOP2	99	82.403	Equus_caballus
ENSLAFG00000002784	-	80	75.116	ENSEEUG00000011692	-	91	75.116	Erinaceus_europaeus
ENSLAFG00000002784	-	87	56.428	ENSELUG00000017384	nop2	98	55.941	Esox_lucius
ENSLAFG00000002784	-	99	80.314	ENSFCAG00000006876	-	99	80.676	Felis_catus
ENSLAFG00000002784	-	64	68.939	ENSFALG00000004797	-	76	73.511	Ficedula_albicollis
ENSLAFG00000002784	-	56	68.842	ENSFHEG00000014327	nop2	72	71.749	Fundulus_heteroclitus
ENSLAFG00000002784	-	56	69.130	ENSGMOG00000011005	nop2	100	69.481	Gadus_morhua
ENSLAFG00000002784	-	56	74.229	ENSGALG00000037807	-	83	73.144	Gallus_gallus
ENSLAFG00000002784	-	56	69.956	ENSGACG00000010317	nop2	100	67.641	Gasterosteus_aculeatus
ENSLAFG00000002784	-	74	65.823	ENSGAGG00000001438	-	90	66.137	Gopherus_agassizii
ENSLAFG00000002784	-	99	83.415	ENSGGOG00000001926	NOP2	99	83.171	Gorilla_gorilla
ENSLAFG00000002784	-	56	58.737	ENSHBUG00000014908	nop2	83	51.235	Haplochromis_burtoni
ENSLAFG00000002784	-	78	59.024	ENSHCOG00000017852	nop2	67	65.251	Hippocampus_comes
ENSLAFG00000002784	-	76	62.362	ENSIPUG00000008198	nop2	88	62.085	Ictalurus_punctatus
ENSLAFG00000002784	-	60	73.409	ENSLBEG00000007281	nop2	84	61.120	Labrus_bergylta
ENSLAFG00000002784	-	67	61.702	ENSLOCG00000007050	nop2	100	60.808	Lepisosteus_oculatus
ENSLAFG00000002784	-	51	74.083	ENSMZEG00005017552	nop2	81	62.500	Maylandia_zebra
ENSLAFG00000002784	-	64	68.880	ENSMGAG00000014082	-	100	73.053	Meleagris_gallopavo
ENSLAFG00000002784	-	100	78.327	ENSMICG00000006570	-	100	78.462	Microcebus_murinus
ENSLAFG00000002784	-	100	74.229	ENSMOCG00000017237	Nop2	100	73.736	Microtus_ochrogaster
ENSLAFG00000002784	-	78	74.661	ENSMODG00000018077	-	89	73.788	Monodelphis_domestica
ENSLAFG00000002784	-	100	74.476	ENSMUSG00000038279	Nop2	100	74.229	Mus_musculus
ENSLAFG00000002784	-	100	81.459	ENSMPUG00000016865	-	100	81.579	Mustela_putorius_furo
ENSLAFG00000002784	-	100	76.328	ENSMLUG00000014333	-	100	76.443	Myotis_lucifugus
ENSLAFG00000002784	-	100	79.238	ENSNGAG00000019010	Nop2	99	78.133	Nannospalax_galili
ENSLAFG00000002784	-	50	67.073	ENSNBRG00000001113	nop2	82	54.574	Neolamprologus_brichardi
ENSLAFG00000002784	-	99	83.495	ENSNLEG00000004242	-	95	87.583	Nomascus_leucogenys
ENSLAFG00000002784	-	79	72.429	ENSMEUG00000015287	-	91	73.053	Notamacropus_eugenii
ENSLAFG00000002784	-	82	94.286	ENSOPRG00000003412	-	79	94.286	Ochotona_princeps
ENSLAFG00000002784	-	77	61.146	ENSONIG00000012896	nop2	84	61.085	Oreochromis_niloticus
ENSLAFG00000002784	-	99	77.467	ENSOCUG00000008203	-	99	77.467	Oryctolagus_cuniculus
ENSLAFG00000002784	-	80	57.287	ENSORLG00020005484	nop2	91	56.046	Oryzias_latipes_hni
ENSLAFG00000002784	-	72	53.333	ENSOMEG00000012751	nop2	77	54.915	Oryzias_melastigma
ENSLAFG00000002784	-	100	82.057	ENSOARG00000007641	-	100	81.699	Ovis_aries
ENSLAFG00000002784	-	99	79.502	ENSPPRG00000012300	-	99	79.502	Panthera_pardus
ENSLAFG00000002784	-	99	79.265	ENSPTIG00000020543	-	99	78.910	Panthera_tigris_altaica
ENSLAFG00000002784	-	99	83.374	ENSPANG00000024426	-	99	83.010	Papio_anubis
ENSLAFG00000002784	-	72	69.587	ENSPSIG00000016127	-	99	68.988	Pelodiscus_sinensis
ENSLAFG00000002784	-	99	75.926	ENSPEMG00000013138	Nop2	99	75.679	Peromyscus_maniculatus_bairdii
ENSLAFG00000002784	-	72	75.534	ENSPCIG00000001788	-	79	74.338	Phascolarctos_cinereus
ENSLAFG00000002784	-	80	59.237	ENSPFOG00000013054	nop2	61	71.047	Poecilia_formosa
ENSLAFG00000002784	-	56	69.017	ENSPLAG00000005975	nop2	81	62.951	Poecilia_latipinna
ENSLAFG00000002784	-	65	62.976	ENSPMEG00000016775	nop2	68	68.172	Poecilia_mexicana
ENSLAFG00000002784	-	58	71.101	ENSPREG00000010428	nop2	60	73.723	Poecilia_reticulata
ENSLAFG00000002784	-	99	83.252	ENSPPYG00000004191	-	99	83.131	Pongo_abelii
ENSLAFG00000002784	-	96	84.403	ENSPCAG00000007033	-	92	84.403	Procavia_capensis
ENSLAFG00000002784	-	76	97.512	ENSPVAG00000012572	-	70	97.512	Pteropus_vampyrus
ENSLAFG00000002784	-	56	62.047	ENSPNYG00000023163	nop2	70	73.684	Pundamilia_nyererei
ENSLAFG00000002784	-	78	60.122	ENSPNAG00000019880	nop2	82	62.461	Pygocentrus_nattereri
ENSLAFG00000002784	-	100	74.723	ENSRNOG00000018453	Nop2	100	74.106	Rattus_norvegicus
ENSLAFG00000002784	-	99	83.171	ENSRROG00000041019	-	99	82.805	Rhinopithecus_roxellana
ENSLAFG00000002784	-	99	82.767	ENSSBOG00000034622	-	99	82.524	Saimiri_boliviensis_boliviensis
ENSLAFG00000002784	-	55	84.424	ENSSHAG00000015028	-	100	72.500	Sarcophilus_harrisii
ENSLAFG00000002784	-	60	66.122	ENSSFOG00015002458	nop2	83	61.490	Scleropages_formosus
ENSLAFG00000002784	-	57	69.499	ENSSMAG00000011738	nop2	67	71.739	Scophthalmus_maximus
ENSLAFG00000002784	-	69	63.158	ENSSARG00000004520	-	81	63.636	Sorex_araneus
ENSLAFG00000002784	-	80	60.057	ENSSPUG00000015240	-	86	63.681	Sphenodon_punctatus
ENSLAFG00000002784	-	99	82.968	ENSSSCG00000000696	-	99	84.334	Sus_scrofa
ENSLAFG00000002784	-	73	66.277	ENSTGUG00000013336	-	100	65.728	Taeniopygia_guttata
ENSLAFG00000002784	-	56	63.100	ENSTRUG00000002011	nop2	81	55.116	Takifugu_rubripes
ENSLAFG00000002784	-	72	61.577	ENSTNIG00000008046	nop2	93	58.347	Tetraodon_nigroviridis
ENSLAFG00000002784	-	60	84.068	ENSTBEG00000010989	-	59	84.014	Tupaia_belangeri
ENSLAFG00000002784	-	96	75.945	ENSTTRG00000016100	-	92	75.819	Tursiops_truncatus
ENSLAFG00000002784	-	100	82.027	ENSUAMG00000016105	-	100	81.785	Ursus_americanus
ENSLAFG00000002784	-	100	82.388	ENSUMAG00000007220	-	100	82.147	Ursus_maritimus
ENSLAFG00000002784	-	100	81.211	ENSVVUG00000011466	-	100	80.841	Vulpes_vulpes
ENSLAFG00000002784	-	73	61.589	ENSXETG00000011515	nop2	100	60.820	Xenopus_tropicalis
ENSLAFG00000002784	-	57	69.723	ENSXMAG00000011483	nop2	64	68.107	Xiphophorus_maculatus