EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000002909 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 1521 bases
Position: chrscaffold_1:103622680-103624200
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	1	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	2	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	3	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	4	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	5	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	6	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	7	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	8	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	9	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	10	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	11	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	12	13
ENSLAFP00000002429	zf-C2H2	PF00096.26	1.3e-69	13	13
ENSLAFP00000002429	zf-met	PF12874.7	9.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002908	-	1506	-	ENSLAFP00000002429	502 (aa)	-	G3SRC7

Gene Model

Click here to download ENSLAFG00000002909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000002909	-	89	52.918	ENSLAFG00000003125	ZFP1	83	52.918
ENSLAFG00000002909	-	95	54.545	ENSLAFG00000006959	ZNF2	68	54.545
ENSLAFG00000002909	-	89	35.013	ENSLAFG00000002266	ZNF319	90	37.123
ENSLAFG00000002909	-	79	37.954	ENSLAFG00000027848	ZNF408	55	37.549
ENSLAFG00000002909	-	80	42.857	ENSLAFG00000005117	SNAI3	50	42.857
ENSLAFG00000002909	-	88	41.077	ENSLAFG00000022290	ZNF668	94	37.063
ENSLAFG00000002909	-	76	31.599	ENSLAFG00000002317	PATZ1	54	31.599
ENSLAFG00000002909	-	76	41.463	ENSLAFG00000013521	SALL3	64	38.636
ENSLAFG00000002909	-	94	44.512	ENSLAFG00000022367	GFI1B	93	44.512
ENSLAFG00000002909	-	89	34.722	ENSLAFG00000012902	ZBTB41	51	34.722
ENSLAFG00000002909	-	88	32.044	ENSLAFG00000013445	ZNF521	98	32.599
ENSLAFG00000002909	-	78	47.170	ENSLAFG00000004309	SALL4	54	47.170
ENSLAFG00000002909	-	86	45.455	ENSLAFG00000000308	ZNF574	93	41.803
ENSLAFG00000002909	-	99	32.549	ENSLAFG00000010205	ZFAT	99	30.435
ENSLAFG00000002909	-	91	49.263	ENSLAFG00000014451	-	79	48.725
ENSLAFG00000002909	-	90	40.678	ENSLAFG00000022529	ZNF628	100	39.109
ENSLAFG00000002909	-	89	38.931	ENSLAFG00000007752	-	99	38.931
ENSLAFG00000002909	-	83	32.751	ENSLAFG00000029320	ZNF784	82	33.597
ENSLAFG00000002909	-	89	49.886	ENSLAFG00000011186	ZNF235	76	49.886
ENSLAFG00000002909	-	90	56.371	ENSLAFG00000011022	ZFP69B	77	56.371
ENSLAFG00000002909	-	80	40.426	ENSLAFG00000032306	-	73	40.426
ENSLAFG00000002909	-	89	59.109	ENSLAFG00000031653	-	100	58.511
ENSLAFG00000002909	-	78	36.054	ENSLAFG00000027315	GTF3A	78	30.903
ENSLAFG00000002909	-	92	38.034	ENSLAFG00000032716	-	100	38.117
ENSLAFG00000002909	-	85	37.662	ENSLAFG00000006532	PRDM5	98	37.662
ENSLAFG00000002909	-	89	55.102	ENSLAFG00000030700	ZNF865	99	56.790
ENSLAFG00000002909	-	80	41.284	ENSLAFG00000009299	SNAI2	56	41.284
ENSLAFG00000002909	-	90	44.538	ENSLAFG00000002806	ZNF317	82	43.046
ENSLAFG00000002909	-	83	38.000	ENSLAFG00000008686	-	98	33.000
ENSLAFG00000002909	-	89	33.175	ENSLAFG00000022960	ZFP64	82	33.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002909	-	100	88.627	ENSCAFG00020003589	-	96	88.627	Canis_lupus_dingo
ENSLAFG00000002909	-	100	83.398	ENSTSYG00000008405	-	84	83.398	Carlito_syrichta
ENSLAFG00000002909	-	99	84.369	ENSCAPG00000013118	-	86	84.585	Cavia_aperea
ENSLAFG00000002909	-	100	79.093	ENSCPOG00000034791	-	83	79.093	Cavia_porcellus
ENSLAFG00000002909	-	100	82.051	ENSCLAG00000014648	-	89	82.051	Chinchilla_lanigera
ENSLAFG00000002909	-	100	85.547	ENSCHOG00000008173	-	84	85.547	Choloepus_hoffmanni
ENSLAFG00000002909	-	89	95.312	ENSCHOG00000003898	-	100	95.312	Choloepus_hoffmanni
ENSLAFG00000002909	-	100	83.235	ENSCGRG00001021088	Zfp354a	84	83.235	Cricetulus_griseus_chok1gshd
ENSLAFG00000002909	-	100	83.235	ENSCGRG00000015037	Zfp354a	84	83.235	Cricetulus_griseus_crigri
ENSLAFG00000002909	-	89	94.832	ENSDNOG00000043806	-	100	94.832	Dasypus_novemcinctus
ENSLAFG00000002909	-	100	81.445	ENSDORG00000009396	Zfp354a	86	81.445	Dipodomys_ordii
ENSLAFG00000002909	-	100	91.376	ENSETEG00000020249	-	99	91.376	Echinops_telfairi
ENSLAFG00000002909	-	100	85.913	ENSEEUG00000008362	-	98	85.913	Erinaceus_europaeus
ENSLAFG00000002909	-	100	81.657	ENSFDAG00000015190	-	89	81.657	Fukomys_damarensis
ENSLAFG00000002909	-	100	81.065	ENSHGLG00000005975	-	84	81.065	Heterocephalus_glaber_female
ENSLAFG00000002909	-	100	81.065	ENSHGLG00100012284	-	99	81.065	Heterocephalus_glaber_male
ENSLAFG00000002909	-	100	85.770	ENSSTOG00000024118	-	95	83.661	Ictidomys_tridecemlineatus
ENSLAFG00000002909	-	100	82.874	ENSMAUG00000000735	Zfp354a	92	82.874	Mesocricetus_auratus
ENSLAFG00000002909	-	100	85.156	ENSMICG00000006390	ZNF354A	85	85.156	Microcebus_murinus
ENSLAFG00000002909	-	100	81.188	ENSMOCG00000003692	Zfp354a	89	81.188	Microtus_ochrogaster
ENSLAFG00000002909	-	100	80.556	MGP_CAROLIEiJ_G0016306	Zfp354a	84	80.556	Mus_caroli
ENSLAFG00000002909	-	100	80.556	ENSMUSG00000020364	Zfp354a	84	80.556	Mus_musculus
ENSLAFG00000002909	-	100	79.960	MGP_PahariEiJ_G0017441	Zfp354a	84	79.960	Mus_pahari
ENSLAFG00000002909	-	100	82.318	ENSNGAG00000011769	Zfp354a	83	82.318	Nannospalax_galili
ENSLAFG00000002909	-	100	84.221	ENSODEG00000008278	-	93	84.221	Octodon_degus
ENSLAFG00000002909	-	100	86.523	ENSPPAG00000039371	ZNF354A	86	86.523	Pan_paniscus
ENSLAFG00000002909	-	100	86.531	ENSPTRG00000017606	ZNF354A	93	86.531	Pan_troglodytes
ENSLAFG00000002909	-	100	81.687	ENSPEMG00000024167	Zfp354a	84	81.657	Peromyscus_maniculatus_bairdii
ENSLAFG00000002909	-	100	82.772	ENSUAMG00000000212	-	88	82.772	Ursus_americanus