EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000002992 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 45120 bases
Position: chrscaffold_28:5968965-6014084
Accession: 100654326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002491	FDF	PF09532.10	2e-19	1	1
ENSLAFP00000002491	LSM14	PF12701.7	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000002989	EDC3-201	1524	-	ENSLAFP00000002491	507 (aa)	XP_003413869	G3SRI2

Gene Model

Click here to download ENSLAFG00000002992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000002992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000002992	EDC3	100	95.669	ENSG00000179151	EDC3	100	98.160	Homo_sapiens
ENSLAFG00000002992	EDC3	100	69.882	ENSAPOG00000010791	edc3	100	69.882	Acanthochromis_polyacanthus
ENSLAFG00000002992	EDC3	100	55.447	ENSAPOG00000008655	EDC3	100	55.447	Acanthochromis_polyacanthus
ENSLAFG00000002992	EDC3	100	95.079	ENSAMEG00000008963	EDC3	100	95.079	Ailuropoda_melanoleuca
ENSLAFG00000002992	EDC3	100	68.701	ENSACIG00000017751	edc3	100	68.701	Amphilophus_citrinellus
ENSLAFG00000002992	EDC3	99	59.844	ENSACIG00000005330	EDC3	99	59.454	Amphilophus_citrinellus
ENSLAFG00000002992	EDC3	100	70.079	ENSAOCG00000005431	edc3	100	70.079	Amphiprion_ocellaris
ENSLAFG00000002992	EDC3	100	58.252	ENSAOCG00000009103	-	100	58.252	Amphiprion_ocellaris
ENSLAFG00000002992	EDC3	100	57.854	ENSAPEG00000007841	EDC3	100	57.854	Amphiprion_percula
ENSLAFG00000002992	EDC3	100	70.079	ENSAPEG00000000968	edc3	100	70.079	Amphiprion_percula
ENSLAFG00000002992	EDC3	100	58.429	ENSATEG00000004205	-	100	58.429	Anabas_testudineus
ENSLAFG00000002992	EDC3	100	69.882	ENSATEG00000015505	edc3	100	69.882	Anabas_testudineus
ENSLAFG00000002992	EDC3	90	87.445	ENSAPLG00000008957	EDC3	100	87.445	Anas_platyrhynchos
ENSLAFG00000002992	EDC3	78	87.626	ENSACAG00000000460	-	100	87.626	Anolis_carolinensis
ENSLAFG00000002992	EDC3	100	95.472	ENSANAG00000024078	EDC3	100	95.472	Aotus_nancymaae
ENSLAFG00000002992	EDC3	100	67.913	ENSACLG00000007232	edc3	100	67.913	Astatotilapia_calliptera
ENSLAFG00000002992	EDC3	99	58.513	ENSACLG00000018776	-	100	58.398	Astatotilapia_calliptera
ENSLAFG00000002992	EDC3	100	71.513	ENSAMXG00000001589	edc3	100	71.513	Astyanax_mexicanus
ENSLAFG00000002992	EDC3	100	96.260	ENSBTAG00000007308	EDC3	100	96.260	Bos_taurus
ENSLAFG00000002992	EDC3	100	95.866	ENSCJAG00000017681	EDC3	100	95.866	Callithrix_jacchus
ENSLAFG00000002992	EDC3	100	95.276	ENSCAFG00000017935	EDC3	100	95.276	Canis_familiaris
ENSLAFG00000002992	EDC3	100	95.276	ENSCAFG00020003909	EDC3	100	95.276	Canis_lupus_dingo
ENSLAFG00000002992	EDC3	100	96.063	ENSCHIG00000023658	EDC3	100	96.063	Capra_hircus
ENSLAFG00000002992	EDC3	100	95.669	ENSTSYG00000004822	EDC3	100	95.669	Carlito_syrichta
ENSLAFG00000002992	EDC3	100	93.898	ENSCPOG00000015595	EDC3	100	93.898	Cavia_porcellus
ENSLAFG00000002992	EDC3	100	95.866	ENSCCAG00000021663	EDC3	100	95.866	Cebus_capucinus
ENSLAFG00000002992	EDC3	100	95.472	ENSCATG00000037511	EDC3	100	95.472	Cercocebus_atys
ENSLAFG00000002992	EDC3	100	93.504	ENSCLAG00000005700	EDC3	100	93.504	Chinchilla_lanigera
ENSLAFG00000002992	EDC3	100	95.472	ENSCSAG00000014239	EDC3	100	95.472	Chlorocebus_sabaeus
ENSLAFG00000002992	EDC3	100	88.583	ENSCPBG00000024239	EDC3	100	88.583	Chrysemys_picta_bellii
ENSLAFG00000002992	EDC3	100	38.269	ENSCING00000022142	-	99	38.269	Ciona_intestinalis
ENSLAFG00000002992	EDC3	100	95.472	ENSCANG00000028699	EDC3	100	95.472	Colobus_angolensis_palliatus
ENSLAFG00000002992	EDC3	100	95.276	ENSCGRG00001013874	Edc3	100	95.276	Cricetulus_griseus_chok1gshd
ENSLAFG00000002992	EDC3	100	95.276	ENSCGRG00000011885	Edc3	100	95.276	Cricetulus_griseus_crigri
ENSLAFG00000002992	EDC3	99	69.625	ENSCSEG00000012996	edc3	99	69.625	Cynoglossus_semilaevis
ENSLAFG00000002992	EDC3	100	69.488	ENSCVAG00000008023	edc3	100	69.488	Cyprinodon_variegatus
ENSLAFG00000002992	EDC3	99	69.352	ENSDARG00000051931	edc3	99	69.352	Danio_rerio
ENSLAFG00000002992	EDC3	100	84.078	ENSDNOG00000030661	EDC3	100	84.078	Dasypus_novemcinctus
ENSLAFG00000002992	EDC3	64	94.444	ENSETEG00000002398	-	64	94.444	Echinops_telfairi
ENSLAFG00000002992	EDC3	100	96.063	ENSEASG00005005071	EDC3	100	96.063	Equus_asinus_asinus
ENSLAFG00000002992	EDC3	100	96.063	ENSECAG00000017994	EDC3	100	96.063	Equus_caballus
ENSLAFG00000002992	EDC3	100	66.016	ENSELUG00000005794	edc3	100	66.016	Esox_lucius
ENSLAFG00000002992	EDC3	100	62.183	ENSELUG00000007607	EDC3	100	62.183	Esox_lucius
ENSLAFG00000002992	EDC3	100	94.488	ENSFCAG00000002014	EDC3	100	94.488	Felis_catus
ENSLAFG00000002992	EDC3	98	84.337	ENSFALG00000004543	EDC3	96	84.337	Ficedula_albicollis
ENSLAFG00000002992	EDC3	100	92.717	ENSFDAG00000012582	EDC3	100	92.717	Fukomys_damarensis
ENSLAFG00000002992	EDC3	100	69.412	ENSFHEG00000009375	edc3	100	69.412	Fundulus_heteroclitus
ENSLAFG00000002992	EDC3	100	67.906	ENSGMOG00000002715	edc3	100	68.297	Gadus_morhua
ENSLAFG00000002992	EDC3	100	88.955	ENSGALG00000040181	EDC3	100	88.955	Gallus_gallus
ENSLAFG00000002992	EDC3	100	68.110	ENSGAFG00000014433	edc3	100	68.110	Gambusia_affinis
ENSLAFG00000002992	EDC3	100	68.504	ENSGACG00000009783	edc3	100	68.504	Gasterosteus_aculeatus
ENSLAFG00000002992	EDC3	99	54.894	ENSGACG00000014671	EDC3	99	55.361	Gasterosteus_aculeatus
ENSLAFG00000002992	EDC3	100	88.560	ENSGAGG00000023477	EDC3	100	88.560	Gopherus_agassizii
ENSLAFG00000002992	EDC3	100	95.866	ENSGGOG00000003552	EDC3	100	95.866	Gorilla_gorilla
ENSLAFG00000002992	EDC3	99	58.513	ENSHBUG00000020817	EDC3	100	58.398	Haplochromis_burtoni
ENSLAFG00000002992	EDC3	100	67.913	ENSHBUG00000003635	edc3	100	67.913	Haplochromis_burtoni
ENSLAFG00000002992	EDC3	100	68.235	ENSHCOG00000016834	edc3	100	68.824	Hippocampus_comes
ENSLAFG00000002992	EDC3	99	70.866	ENSIPUG00000005695	edc3	100	70.866	Ictalurus_punctatus
ENSLAFG00000002992	EDC3	100	96.063	ENSSTOG00000013936	EDC3	100	96.063	Ictidomys_tridecemlineatus
ENSLAFG00000002992	EDC3	100	94.685	ENSJJAG00000008074	Edc3	100	94.685	Jaculus_jaculus
ENSLAFG00000002992	EDC3	100	69.094	ENSKMAG00000001243	edc3	100	69.094	Kryptolebias_marmoratus
ENSLAFG00000002992	EDC3	100	55.273	ENSKMAG00000001987	EDC3	100	55.273	Kryptolebias_marmoratus
ENSLAFG00000002992	EDC3	100	69.094	ENSLBEG00000013435	edc3	99	69.094	Labrus_bergylta
ENSLAFG00000002992	EDC3	100	58.157	ENSLBEG00000017984	EDC3	100	58.157	Labrus_bergylta
ENSLAFG00000002992	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSLAFG00000002992	EDC3	99	67.446	ENSLOCG00000014625	edc3	99	67.710	Lepisosteus_oculatus
ENSLAFG00000002992	EDC3	100	95.276	ENSMFAG00000043074	EDC3	100	95.276	Macaca_fascicularis
ENSLAFG00000002992	EDC3	100	95.276	ENSMMUG00000011071	EDC3	100	95.276	Macaca_mulatta
ENSLAFG00000002992	EDC3	100	95.276	ENSMNEG00000035316	EDC3	100	95.276	Macaca_nemestrina
ENSLAFG00000002992	EDC3	100	95.472	ENSMLEG00000030372	EDC3	100	95.472	Mandrillus_leucophaeus
ENSLAFG00000002992	EDC3	100	69.685	ENSMAMG00000000505	edc3	100	69.685	Mastacembelus_armatus
ENSLAFG00000002992	EDC3	99	57.422	ENSMAMG00000005423	-	99	57.422	Mastacembelus_armatus
ENSLAFG00000002992	EDC3	100	67.913	ENSMZEG00005004892	edc3	100	67.913	Maylandia_zebra
ENSLAFG00000002992	EDC3	100	58.285	ENSMZEG00005005654	EDC3	100	58.285	Maylandia_zebra
ENSLAFG00000002992	EDC3	100	87.968	ENSMGAG00000002617	EDC3	100	87.968	Meleagris_gallopavo
ENSLAFG00000002992	EDC3	100	95.669	ENSMICG00000043190	EDC3	100	95.669	Microcebus_murinus
ENSLAFG00000002992	EDC3	100	94.882	ENSMOCG00000016205	Edc3	100	94.882	Microtus_ochrogaster
ENSLAFG00000002992	EDC3	99	69.231	ENSMMOG00000012278	edc3	99	69.231	Mola_mola
ENSLAFG00000002992	EDC3	100	92.126	ENSMODG00000009442	EDC3	100	92.126	Monodelphis_domestica
ENSLAFG00000002992	EDC3	100	69.685	ENSMALG00000008658	edc3	100	69.685	Monopterus_albus
ENSLAFG00000002992	EDC3	100	93.701	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSLAFG00000002992	EDC3	100	93.701	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSLAFG00000002992	EDC3	100	93.898	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSLAFG00000002992	EDC3	100	93.504	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSLAFG00000002992	EDC3	100	95.276	ENSMPUG00000017293	EDC3	100	95.276	Mustela_putorius_furo
ENSLAFG00000002992	EDC3	100	94.706	ENSMLUG00000016382	EDC3	100	94.706	Myotis_lucifugus
ENSLAFG00000002992	EDC3	100	94.685	ENSNGAG00000010923	Edc3	100	94.685	Nannospalax_galili
ENSLAFG00000002992	EDC3	100	68.110	ENSNBRG00000002434	edc3	100	68.110	Neolamprologus_brichardi
ENSLAFG00000002992	EDC3	99	58.121	ENSNBRG00000007881	EDC3	100	58.008	Neolamprologus_brichardi
ENSLAFG00000002992	EDC3	100	86.024	ENSNLEG00000014577	EDC3	100	86.024	Nomascus_leucogenys
ENSLAFG00000002992	EDC3	100	91.716	ENSMEUG00000009077	EDC3	100	91.716	Notamacropus_eugenii
ENSLAFG00000002992	EDC3	79	92.593	ENSOPRG00000009540	-	79	92.593	Ochotona_princeps
ENSLAFG00000002992	EDC3	100	59.533	ENSONIG00000002932	-	100	59.533	Oreochromis_niloticus
ENSLAFG00000002992	EDC3	100	68.110	ENSONIG00000008434	edc3	100	68.110	Oreochromis_niloticus
ENSLAFG00000002992	EDC3	78	89.421	ENSOCUG00000017740	EDC3	86	89.421	Oryctolagus_cuniculus
ENSLAFG00000002992	EDC3	100	67.717	ENSORLG00000004883	edc3	100	67.717	Oryzias_latipes
ENSLAFG00000002992	EDC3	100	56.920	ENSORLG00000014399	-	98	56.556	Oryzias_latipes
ENSLAFG00000002992	EDC3	100	67.913	ENSORLG00020012262	edc3	100	67.913	Oryzias_latipes_hni
ENSLAFG00000002992	EDC3	100	56.920	ENSORLG00020019446	-	100	56.556	Oryzias_latipes_hni
ENSLAFG00000002992	EDC3	100	56.920	ENSORLG00015017635	-	96	56.920	Oryzias_latipes_hsok
ENSLAFG00000002992	EDC3	100	67.913	ENSORLG00015005634	edc3	100	67.913	Oryzias_latipes_hsok
ENSLAFG00000002992	EDC3	100	68.898	ENSOMEG00000014026	edc3	100	68.898	Oryzias_melastigma
ENSLAFG00000002992	EDC3	100	56.947	ENSOMEG00000017354	EDC3	100	56.947	Oryzias_melastigma
ENSLAFG00000002992	EDC3	100	96.457	ENSOGAG00000014441	EDC3	100	96.457	Otolemur_garnettii
ENSLAFG00000002992	EDC3	100	95.285	ENSOARG00000003476	EDC3	100	95.678	Ovis_aries
ENSLAFG00000002992	EDC3	100	95.866	ENSPPAG00000040143	EDC3	100	95.866	Pan_paniscus
ENSLAFG00000002992	EDC3	100	94.882	ENSPPRG00000006257	EDC3	100	94.882	Panthera_pardus
ENSLAFG00000002992	EDC3	100	94.882	ENSPTIG00000017424	EDC3	100	94.882	Panthera_tigris_altaica
ENSLAFG00000002992	EDC3	100	95.866	ENSPTRG00000007279	EDC3	100	95.866	Pan_troglodytes
ENSLAFG00000002992	EDC3	100	95.472	ENSPANG00000015997	EDC3	100	95.472	Papio_anubis
ENSLAFG00000002992	EDC3	100	68.689	ENSPKIG00000004416	edc3	100	69.863	Paramormyrops_kingsleyae
ENSLAFG00000002992	EDC3	100	66.145	ENSPKIG00000019810	EDC3	100	66.145	Paramormyrops_kingsleyae
ENSLAFG00000002992	EDC3	100	83.071	ENSPSIG00000008474	EDC3	100	83.071	Pelodiscus_sinensis
ENSLAFG00000002992	EDC3	100	67.059	ENSPMGG00000007223	edc3	100	67.059	Periophthalmus_magnuspinnatus
ENSLAFG00000002992	EDC3	100	94.685	ENSPEMG00000015260	Edc3	100	94.685	Peromyscus_maniculatus_bairdii
ENSLAFG00000002992	EDC3	100	90.138	ENSPCIG00000006276	EDC3	70	90.316	Phascolarctos_cinereus
ENSLAFG00000002992	EDC3	100	69.291	ENSPFOG00000012204	edc3	100	69.291	Poecilia_formosa
ENSLAFG00000002992	EDC3	100	69.291	ENSPLAG00000014420	edc3	100	69.291	Poecilia_latipinna
ENSLAFG00000002992	EDC3	100	69.291	ENSPMEG00000023289	edc3	100	69.291	Poecilia_mexicana
ENSLAFG00000002992	EDC3	100	69.291	ENSPREG00000016022	edc3	100	69.291	Poecilia_reticulata
ENSLAFG00000002992	EDC3	100	94.685	ENSPPYG00000006642	EDC3	100	94.685	Pongo_abelii
ENSLAFG00000002992	EDC3	88	96.438	ENSPCAG00000002802	EDC3	88	96.438	Procavia_capensis
ENSLAFG00000002992	EDC3	100	95.472	ENSPCOG00000013364	EDC3	100	95.472	Propithecus_coquereli
ENSLAFG00000002992	EDC3	100	94.685	ENSPVAG00000014733	EDC3	100	94.685	Pteropus_vampyrus
ENSLAFG00000002992	EDC3	99	58.513	ENSPNYG00000009669	EDC3	100	58.398	Pundamilia_nyererei
ENSLAFG00000002992	EDC3	100	67.913	ENSPNYG00000021797	edc3	100	67.913	Pundamilia_nyererei
ENSLAFG00000002992	EDC3	100	70.923	ENSPNAG00000019657	edc3	100	70.923	Pygocentrus_nattereri
ENSLAFG00000002992	EDC3	99	94.466	ENSRNOG00000019579	Edc3	100	95.059	Rattus_norvegicus
ENSLAFG00000002992	EDC3	100	95.276	ENSRBIG00000019488	EDC3	100	95.276	Rhinopithecus_bieti
ENSLAFG00000002992	EDC3	100	95.276	ENSRROG00000034959	EDC3	100	95.276	Rhinopithecus_roxellana
ENSLAFG00000002992	EDC3	100	96.063	ENSSBOG00000004896	EDC3	100	96.063	Saimiri_boliviensis_boliviensis
ENSLAFG00000002992	EDC3	96	91.189	ENSSHAG00000015075	EDC3	95	91.189	Sarcophilus_harrisii
ENSLAFG00000002992	EDC3	100	69.786	ENSSFOG00015016939	edc3	100	70.565	Scleropages_formosus
ENSLAFG00000002992	EDC3	81	79.104	ENSSFOG00015002439	edc3	100	65.497	Scleropages_formosus
ENSLAFG00000002992	EDC3	99	57.364	ENSSMAG00000010176	-	99	57.364	Scophthalmus_maximus
ENSLAFG00000002992	EDC3	100	69.488	ENSSMAG00000010695	edc3	100	69.685	Scophthalmus_maximus
ENSLAFG00000002992	EDC3	100	69.488	ENSSDUG00000021844	edc3	100	70.079	Seriola_dumerili
ENSLAFG00000002992	EDC3	100	60.117	ENSSDUG00000007671	EDC3	100	60.117	Seriola_dumerili
ENSLAFG00000002992	EDC3	100	69.488	ENSSLDG00000022046	edc3	100	70.079	Seriola_lalandi_dorsalis
ENSLAFG00000002992	EDC3	80	95.968	ENSSARG00000003907	EDC3	80	95.968	Sorex_araneus
ENSLAFG00000002992	EDC3	100	87.992	ENSSPUG00000008232	EDC3	100	87.992	Sphenodon_punctatus
ENSLAFG00000002992	EDC3	100	57.895	ENSSPAG00000020327	EDC3	100	57.895	Stegastes_partitus
ENSLAFG00000002992	EDC3	100	69.882	ENSSPAG00000010009	edc3	100	69.882	Stegastes_partitus
ENSLAFG00000002992	EDC3	100	95.472	ENSSSCG00000001903	EDC3	100	95.472	Sus_scrofa
ENSLAFG00000002992	EDC3	100	88.363	ENSTGUG00000004007	EDC3	100	88.363	Taeniopygia_guttata
ENSLAFG00000002992	EDC3	100	70.276	ENSTRUG00000017078	edc3	100	70.276	Takifugu_rubripes
ENSLAFG00000002992	EDC3	100	68.824	ENSTNIG00000016047	edc3	100	68.824	Tetraodon_nigroviridis
ENSLAFG00000002992	EDC3	100	95.079	ENSTTRG00000007990	EDC3	100	95.079	Tursiops_truncatus
ENSLAFG00000002992	EDC3	100	95.079	ENSUAMG00000026710	-	100	95.079	Ursus_americanus
ENSLAFG00000002992	EDC3	100	95.079	ENSUMAG00000005006	EDC3	96	95.079	Ursus_maritimus
ENSLAFG00000002992	EDC3	79	83.333	ENSVPAG00000003499	-	79	83.333	Vicugna_pacos
ENSLAFG00000002992	EDC3	100	95.472	ENSVVUG00000018601	EDC3	100	95.472	Vulpes_vulpes
ENSLAFG00000002992	EDC3	68	81.897	ENSXETG00000010622	edc3	99	83.046	Xenopus_tropicalis
ENSLAFG00000002992	EDC3	100	69.291	ENSXMAG00000007377	edc3	100	69.291	Xiphophorus_maculatus