EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000003083 (Gene tree)
Gene ID: -
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 3257 bases
Position: chrscaffold_49:1107231-1110487
Accession: 19071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002571	RRM_1	PF00076.22	6.2e-14	1	1
ENSLAFP00000024678	RRM_1	PF00076.22	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033080	ALYREF-202	564	-	ENSLAFP00000024678	187 (aa)	-	G3UA20
ENSLAFT00000003083	ALYREF-201	564	-	ENSLAFP00000002571	187 (aa)	-	G3UA20

Gene Model

Click here to download ENSLAFG00000003083's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003083's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003083	ALYREF	98	92.935	ENSG00000183684	ALYREF	71	94.149	Homo_sapiens
ENSLAFG00000003083	ALYREF	100	73.762	ENSAPOG00000018455	ALYREF	74	79.104	Acanthochromis_polyacanthus
ENSLAFG00000003083	ALYREF	99	93.548	ENSAMEG00000017463	ALYREF	74	94.536	Ailuropoda_melanoleuca
ENSLAFG00000003083	ALYREF	100	89.840	ENSACAG00000010526	ALYREF	73	89.305	Anolis_carolinensis
ENSLAFG00000003083	ALYREF	100	83.422	ENSANAG00000028229	-	62	80.214	Aotus_nancymaae
ENSLAFG00000003083	ALYREF	94	92.090	ENSANAG00000022638	-	75	93.220	Aotus_nancymaae
ENSLAFG00000003083	ALYREF	98	95.109	ENSBTAG00000008498	ALYREF	73	96.809	Bos_taurus
ENSLAFG00000003083	ALYREF	98	91.848	ENSCJAG00000039942	ALYREF	71	94.149	Callithrix_jacchus
ENSLAFG00000003083	ALYREF	98	95.109	ENSCAFG00000005877	ALYREF	73	96.809	Canis_familiaris
ENSLAFG00000003083	ALYREF	98	95.109	ENSCAFG00020009815	ALYREF	73	96.809	Canis_lupus_dingo
ENSLAFG00000003083	ALYREF	98	94.054	ENSCHIG00000017396	ALYREF	71	95.767	Capra_hircus
ENSLAFG00000003083	ALYREF	98	87.500	ENSTSYG00000002272	ALYREF	69	94.857	Carlito_syrichta
ENSLAFG00000003083	ALYREF	71	95.489	ENSCAPG00000014727	-	100	95.489	Cavia_aperea
ENSLAFG00000003083	ALYREF	100	96.791	ENSCPOG00000013710	ALYREF	81	89.840	Cavia_porcellus
ENSLAFG00000003083	ALYREF	100	82.353	ENSCCAG00000030237	-	82	81.283	Cebus_capucinus
ENSLAFG00000003083	ALYREF	100	93.617	ENSCCAG00000020578	-	71	94.681	Cebus_capucinus
ENSLAFG00000003083	ALYREF	98	93.478	ENSCATG00000033169	ALYREF	71	94.681	Cercocebus_atys
ENSLAFG00000003083	ALYREF	95	93.258	ENSCLAG00000015026	ALYREF	75	96.067	Chinchilla_lanigera
ENSLAFG00000003083	ALYREF	98	93.478	ENSCSAG00000002216	ALYREF	71	94.681	Chlorocebus_sabaeus
ENSLAFG00000003083	ALYREF	99	87.895	ENSCANG00000034056	ALYREF	95	84.409	Colobus_angolensis_palliatus
ENSLAFG00000003083	ALYREF	100	96.791	ENSCGRG00001018191	-	82	91.979	Cricetulus_griseus_chok1gshd
ENSLAFG00000003083	ALYREF	99	93.011	ENSCGRG00000015871	-	94	84.536	Cricetulus_griseus_crigri
ENSLAFG00000003083	ALYREF	61	66.393	ENSCSEG00000015438	-	66	67.480	Cynoglossus_semilaevis
ENSLAFG00000003083	ALYREF	95	93.820	ENSDNOG00000002563	ALYREF	79	93.048	Dasypus_novemcinctus
ENSLAFG00000003083	ALYREF	95	93.855	ENSDORG00000025849	-	73	94.444	Dipodomys_ordii
ENSLAFG00000003083	ALYREF	95	98.305	ENSETEG00000016596	ALYREF	100	98.305	Echinops_telfairi
ENSLAFG00000003083	ALYREF	98	94.565	ENSEASG00005005824	ALYREF	70	96.277	Equus_asinus_asinus
ENSLAFG00000003083	ALYREF	98	94.565	ENSECAG00000018754	ALYREF	70	96.277	Equus_caballus
ENSLAFG00000003083	ALYREF	55	100.000	ENSEEUG00000010164	ALYREF	60	100.000	Erinaceus_europaeus
ENSLAFG00000003083	ALYREF	98	94.565	ENSFCAG00000022549	ALYREF	71	96.277	Felis_catus
ENSLAFG00000003083	ALYREF	95	96.648	ENSFDAG00000001213	ALYREF	81	96.591	Fukomys_damarensis
ENSLAFG00000003083	ALYREF	100	94.149	ENSGALG00000007237	ALYREF	74	93.085	Gallus_gallus
ENSLAFG00000003083	ALYREF	100	78.947	ENSGACG00000013328	ALYREF	73	79.365	Gasterosteus_aculeatus
ENSLAFG00000003083	ALYREF	100	91.534	ENSGAGG00000008536	ALYREF	73	92.593	Gopherus_agassizii
ENSLAFG00000003083	ALYREF	98	93.478	ENSGGOG00000013935	ALYREF	73	93.651	Gorilla_gorilla
ENSLAFG00000003083	ALYREF	100	97.340	ENSHGLG00000008293	ALYREF	81	90.374	Heterocephalus_glaber_female
ENSLAFG00000003083	ALYREF	99	87.000	ENSHGLG00100006949	ALYREF	85	88.500	Heterocephalus_glaber_male
ENSLAFG00000003083	ALYREF	100	73.737	ENSHCOG00000015046	ALYREF	74	77.041	Hippocampus_comes
ENSLAFG00000003083	ALYREF	98	96.721	ENSJJAG00000004134	-	73	95.187	Jaculus_jaculus
ENSLAFG00000003083	ALYREF	100	79.275	ENSLACG00000005694	ALYREF	75	80.829	Latimeria_chalumnae
ENSLAFG00000003083	ALYREF	98	93.478	ENSMFAG00000001394	ALYREF	73	94.681	Macaca_fascicularis
ENSLAFG00000003083	ALYREF	98	93.478	ENSMMUG00000012884	ALYREF	71	94.681	Macaca_mulatta
ENSLAFG00000003083	ALYREF	98	93.478	ENSMNEG00000043666	ALYREF	71	94.681	Macaca_nemestrina
ENSLAFG00000003083	ALYREF	99	85.185	ENSMLEG00000043353	ALYREF	87	84.127	Mandrillus_leucophaeus
ENSLAFG00000003083	ALYREF	100	93.122	ENSMAUG00000020552	-	87	93.820	Mesocricetus_auratus
ENSLAFG00000003083	ALYREF	100	96.791	ENSMICG00000017403	ALYREF	71	96.791	Microcebus_murinus
ENSLAFG00000003083	ALYREF	99	95.699	ENSMOCG00000016792	-	83	88.649	Microtus_ochrogaster
ENSLAFG00000003083	ALYREF	98	91.351	ENSMODG00000003030	ALYREF	61	94.118	Monodelphis_domestica
ENSLAFG00000003083	ALYREF	100	76.733	ENSMALG00000019408	ALYREF	74	79.000	Monopterus_albus
ENSLAFG00000003083	ALYREF	100	81.818	MGP_CAROLIEiJ_G0014874	Alyref2	83	79.144	Mus_caroli
ENSLAFG00000003083	ALYREF	100	97.861	MGP_CAROLIEiJ_G0017529	Alyref	73	97.861	Mus_caroli
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000095022	Gm20765	82	60.000	Mus_musculus
ENSLAFG00000003083	ALYREF	100	67.580	ENSMUSG00000090854	Gm4340	83	58.904	Mus_musculus
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000097878	Gm8764	66	81.443	Mus_musculus
ENSLAFG00000003083	ALYREF	100	82.888	ENSMUSG00000060244	Alyref2	83	79.144	Mus_musculus
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000097427	Gm6763	66	81.443	Mus_musculus
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000094144	Gm21312	82	60.000	Mus_musculus
ENSLAFG00000003083	ALYREF	100	71.429	ENSMUSG00000086727	4931428L18Rik	81	70.769	Mus_musculus
ENSLAFG00000003083	ALYREF	100	97.861	ENSMUSG00000025134	Alyref	73	97.861	Mus_musculus
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000091779	Gm21293	82	60.000	Mus_musculus
ENSLAFG00000003083	ALYREF	100	70.408	ENSMUSG00000117091	AC153137.1	81	70.256	Mus_musculus
ENSLAFG00000003083	ALYREF	100	68.837	ENSMUSG00000097550	Gm21304	82	60.000	Mus_musculus
ENSLAFG00000003083	ALYREF	76	81.690	MGP_PahariEiJ_G0027254	-	61	82.836	Mus_pahari
ENSLAFG00000003083	ALYREF	76	81.690	MGP_PahariEiJ_G0027255	-	60	82.836	Mus_pahari
ENSLAFG00000003083	ALYREF	100	97.861	MGP_PahariEiJ_G0018655	-	73	97.861	Mus_pahari
ENSLAFG00000003083	ALYREF	66	99.194	MGP_PahariEiJ_G0018656	-	66	99.194	Mus_pahari
ENSLAFG00000003083	ALYREF	100	97.861	MGP_SPRETEiJ_G0018373	Alyref	73	97.861	Mus_spretus
ENSLAFG00000003083	ALYREF	95	58.407	MGP_SPRETEiJ_G0016590	-	55	78.226	Mus_spretus
ENSLAFG00000003083	ALYREF	100	81.818	MGP_SPRETEiJ_G0015679	Alyref2	83	78.075	Mus_spretus
ENSLAFG00000003083	ALYREF	97	73.626	ENSMLUG00000027352	-	62	70.330	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	94	64.607	ENSMLUG00000028343	-	85	64.045	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	72.043	ENSMLUG00000025677	-	62	71.505	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	61.905	ENSMLUG00000015043	-	79	61.376	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	70.811	ENSMLUG00000030407	-	61	69.189	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	68.984	ENSMLUG00000002626	-	73	68.984	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	100	91.979	ENSMLUG00000009555	-	68	89.840	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	73.077	ENSMLUG00000024976	-	63	69.231	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	64.171	ENSMLUG00000022869	-	66	64.706	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	62.304	ENSMLUG00000024471	-	66	60.209	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	72.928	ENSMLUG00000026271	-	62	69.613	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	98	56.250	ENSMLUG00000023213	-	74	55.959	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	76.374	ENSMLUG00000027516	-	61	76.374	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	97	71.429	ENSMLUG00000024447	-	61	67.582	Myotis_lucifugus
ENSLAFG00000003083	ALYREF	98	93.478	ENSNLEG00000010313	ALYREF	71	94.681	Nomascus_leucogenys
ENSLAFG00000003083	ALYREF	71	88.060	ENSMEUG00000002210	ALYREF	82	70.745	Notamacropus_eugenii
ENSLAFG00000003083	ALYREF	71	94.737	ENSOPRG00000005551	-	52	94.737	Ochotona_princeps
ENSLAFG00000003083	ALYREF	98	91.979	ENSODEG00000008359	ALYREF	73	94.764	Octodon_degus
ENSLAFG00000003083	ALYREF	100	74.747	ENSORLG00000012331	ALYREF	74	77.665	Oryzias_latipes
ENSLAFG00000003083	ALYREF	95	96.089	ENSOGAG00000012409	ALYREF	76	96.089	Otolemur_garnettii
ENSLAFG00000003083	ALYREF	95	94.944	ENSOARG00000017932	ALYREF	67	96.629	Ovis_aries
ENSLAFG00000003083	ALYREF	98	94.565	ENSPPRG00000010829	ALYREF	71	96.277	Panthera_pardus
ENSLAFG00000003083	ALYREF	67	97.600	ENSPTIG00000006399	ALYREF	69	98.387	Panthera_tigris_altaica
ENSLAFG00000003083	ALYREF	98	93.478	ENSPTRG00000009774	ALYREF	71	94.681	Pan_troglodytes
ENSLAFG00000003083	ALYREF	98	93.478	ENSPANG00000019265	ALYREF	71	94.681	Papio_anubis
ENSLAFG00000003083	ALYREF	70	88.722	ENSPSIG00000017541	ALYREF	98	90.226	Pelodiscus_sinensis
ENSLAFG00000003083	ALYREF	98	93.478	ENSPPYG00000008749	ALYREF	71	94.681	Pongo_abelii
ENSLAFG00000003083	ALYREF	100	96.791	ENSPCOG00000020874	ALYREF	71	96.791	Propithecus_coquereli
ENSLAFG00000003083	ALYREF	95	95.480	ENSPVAG00000017866	ALYREF	69	93.220	Pteropus_vampyrus
ENSLAFG00000003083	ALYREF	55	100.000	ENSRNOG00000036687	Alyref	54	100.000	Rattus_norvegicus
ENSLAFG00000003083	ALYREF	96	90.055	ENSRBIG00000039651	ALYREF	74	91.160	Rhinopithecus_bieti
ENSLAFG00000003083	ALYREF	98	91.892	ENSRROG00000045364	ALYREF	74	93.122	Rhinopithecus_roxellana
ENSLAFG00000003083	ALYREF	98	89.189	ENSSHAG00000010459	ALYREF	96	91.892	Sarcophilus_harrisii
ENSLAFG00000003083	ALYREF	97	58.824	ENSSDUG00000003992	-	78	58.937	Seriola_dumerili
ENSLAFG00000003083	ALYREF	97	59.204	ENSSLDG00000005386	-	78	60.784	Seriola_lalandi_dorsalis
ENSLAFG00000003083	ALYREF	100	92.553	ENSSPUG00000004600	ALYREF	73	92.553	Sphenodon_punctatus
ENSLAFG00000003083	ALYREF	100	73.399	ENSSPAG00000011178	ALYREF	72	76.733	Stegastes_partitus
ENSLAFG00000003083	ALYREF	99	95.161	ENSSSCG00000032655	ALYREF	73	96.809	Sus_scrofa
ENSLAFG00000003083	ALYREF	70	90.909	ENSTGUG00000003513	ALYREF	100	88.889	Taeniopygia_guttata
ENSLAFG00000003083	ALYREF	100	76.768	ENSTRUG00000008828	ALYREF	74	75.377	Takifugu_rubripes
ENSLAFG00000003083	ALYREF	95	93.258	ENSTBEG00000005834	ALYREF	100	95.506	Tupaia_belangeri
ENSLAFG00000003083	ALYREF	100	96.277	ENSTTRG00000012275	ALYREF	73	96.277	Tursiops_truncatus
ENSLAFG00000003083	ALYREF	94	84.659	ENSUAMG00000016931	ALYREF	66	84.659	Ursus_americanus
ENSLAFG00000003083	ALYREF	94	84.659	ENSUMAG00000016384	ALYREF	65	84.659	Ursus_maritimus
ENSLAFG00000003083	ALYREF	100	87.766	ENSXETG00000005391	alyref	79	87.766	Xenopus_tropicalis