EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000003178 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 151112 bases
Position: chrscaffold_34:9543821-9694932
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	1	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	2	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	3	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	4	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	5	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	6	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	7	8
ENSLAFP00000002639	PUF	PF00806.19	5.6e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000003178	PUM1-201	3564	-	ENSLAFP00000002639	1187 (aa)	-	G3SRU9

Gene Model

Click here to download ENSLAFG00000003178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000003178	PUM1	89	76.716	ENSLAFG00000009278	PUM2	100	76.531

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003178	PUM1	100	98.991	ENSG00000134644	PUM1	100	98.991	Homo_sapiens
ENSLAFG00000003178	PUM1	90	92.530	ENSAPOG00000021632	pum1	100	92.530	Acanthochromis_polyacanthus
ENSLAFG00000003178	PUM1	100	98.739	ENSAMEG00000017656	PUM1	97	98.739	Ailuropoda_melanoleuca
ENSLAFG00000003178	PUM1	100	74.544	ENSACIG00000021013	pum1	100	76.325	Amphilophus_citrinellus
ENSLAFG00000003178	PUM1	90	92.530	ENSAOCG00000003944	pum1	100	92.530	Amphiprion_ocellaris
ENSLAFG00000003178	PUM1	90	92.530	ENSAPEG00000014550	pum1	100	92.530	Amphiprion_percula
ENSLAFG00000003178	PUM1	90	89.425	ENSATEG00000016004	pum1	100	92.530	Anabas_testudineus
ENSLAFG00000003178	PUM1	100	97.140	ENSAPLG00000009351	PUM1	100	97.140	Anas_platyrhynchos
ENSLAFG00000003178	PUM1	100	94.701	ENSACAG00000000682	PUM1	98	95.374	Anolis_carolinensis
ENSLAFG00000003178	PUM1	100	98.570	ENSANAG00000027865	PUM1	100	98.570	Aotus_nancymaae
ENSLAFG00000003178	PUM1	90	76.944	ENSACLG00000019354	pum1	100	78.928	Astatotilapia_calliptera
ENSLAFG00000003178	PUM1	100	78.512	ENSAMXG00000020607	pum1	96	78.010	Astyanax_mexicanus
ENSLAFG00000003178	PUM1	100	98.654	ENSBTAG00000018979	PUM1	100	99.275	Bos_taurus
ENSLAFG00000003178	PUM1	100	98.738	ENSCJAG00000006035	PUM1	100	98.738	Callithrix_jacchus
ENSLAFG00000003178	PUM1	100	96.636	ENSCAFG00000011205	PUM1	100	96.636	Canis_familiaris
ENSLAFG00000003178	PUM1	92	96.906	ENSCAFG00020024616	PUM1	99	98.292	Canis_lupus_dingo
ENSLAFG00000003178	PUM1	100	98.654	ENSCHIG00000012952	PUM1	100	98.792	Capra_hircus
ENSLAFG00000003178	PUM1	100	98.654	ENSTSYG00000008868	PUM1	100	98.654	Carlito_syrichta
ENSLAFG00000003178	PUM1	100	98.486	ENSCPOG00000031613	PUM1	100	98.486	Cavia_porcellus
ENSLAFG00000003178	PUM1	100	96.720	ENSCATG00000017991	PUM1	100	99.034	Cercocebus_atys
ENSLAFG00000003178	PUM1	100	98.570	ENSCLAG00000007662	PUM1	100	98.570	Chinchilla_lanigera
ENSLAFG00000003178	PUM1	100	98.083	ENSCSAG00000001028	PUM1	100	98.083	Chlorocebus_sabaeus
ENSLAFG00000003178	PUM1	93	95.690	ENSCHOG00000010245	PUM1	93	95.690	Choloepus_hoffmanni
ENSLAFG00000003178	PUM1	100	97.225	ENSCPBG00000009288	PUM1	100	97.826	Chrysemys_picta_bellii
ENSLAFG00000003178	PUM1	100	98.907	ENSCANG00000042606	PUM1	100	98.551	Colobus_angolensis_palliatus
ENSLAFG00000003178	PUM1	100	97.897	ENSCGRG00001024949	Pum1	100	97.897	Cricetulus_griseus_chok1gshd
ENSLAFG00000003178	PUM1	100	97.897	ENSCGRG00000014197	Pum1	100	97.897	Cricetulus_griseus_crigri
ENSLAFG00000003178	PUM1	90	76.574	ENSCSEG00000015981	pum1	100	78.446	Cynoglossus_semilaevis
ENSLAFG00000003178	PUM1	100	74.255	ENSCVAG00000007043	pum1	100	76.100	Cyprinodon_variegatus
ENSLAFG00000003178	PUM1	100	78.679	ENSDARG00000099256	pum1	100	78.428	Danio_rerio
ENSLAFG00000003178	PUM1	100	98.570	ENSDNOG00000010939	PUM1	100	98.570	Dasypus_novemcinctus
ENSLAFG00000003178	PUM1	85	95.169	ENSDORG00000001875	Pum1	100	98.068	Dipodomys_ordii
ENSLAFG00000003178	PUM1	88	93.659	ENSETEG00000004355	PUM1	87	93.659	Echinops_telfairi
ENSLAFG00000003178	PUM1	100	98.654	ENSEASG00005010813	PUM1	100	98.654	Equus_asinus_asinus
ENSLAFG00000003178	PUM1	100	98.654	ENSECAG00000021369	PUM1	100	98.654	Equus_caballus
ENSLAFG00000003178	PUM1	76	99.333	ENSEEUG00000003871	PUM1	74	99.333	Erinaceus_europaeus
ENSLAFG00000003178	PUM1	100	75.144	ENSELUG00000002409	pum1	100	82.200	Esox_lucius
ENSLAFG00000003178	PUM1	100	98.991	ENSFCAG00000010374	PUM1	100	99.275	Felis_catus
ENSLAFG00000003178	PUM1	100	95.645	ENSFALG00000001214	PUM1	97	94.975	Ficedula_albicollis
ENSLAFG00000003178	PUM1	100	98.486	ENSFDAG00000011319	PUM1	100	98.486	Fukomys_damarensis
ENSLAFG00000003178	PUM1	100	97.393	ENSGALG00000042598	PUM1	100	97.393	Gallus_gallus
ENSLAFG00000003178	PUM1	90	88.736	ENSGAFG00000015617	pum1	100	91.807	Gambusia_affinis
ENSLAFG00000003178	PUM1	100	75.145	ENSGACG00000005717	pum1	100	75.927	Gasterosteus_aculeatus
ENSLAFG00000003178	PUM1	100	97.056	ENSGAGG00000001290	PUM1	99	98.178	Gopherus_agassizii
ENSLAFG00000003178	PUM1	100	98.907	ENSGGOG00000011983	PUM1	100	98.659	Gorilla_gorilla
ENSLAFG00000003178	PUM1	100	74.586	ENSHBUG00000018718	pum1	100	76.515	Haplochromis_burtoni
ENSLAFG00000003178	PUM1	100	98.318	ENSHGLG00000013819	Pum1	100	98.318	Heterocephalus_glaber_female
ENSLAFG00000003178	PUM1	100	98.318	ENSHGLG00100008621	Pum1	100	98.318	Heterocephalus_glaber_male
ENSLAFG00000003178	PUM1	90	75.093	ENSHCOG00000005149	pum1	100	74.468	Hippocampus_comes
ENSLAFG00000003178	PUM1	100	77.038	ENSIPUG00000020421	pum1	100	76.974	Ictalurus_punctatus
ENSLAFG00000003178	PUM1	100	98.654	ENSSTOG00000010757	PUM1	100	98.654	Ictidomys_tridecemlineatus
ENSLAFG00000003178	PUM1	100	98.234	ENSJJAG00000000530	Pum1	100	98.234	Jaculus_jaculus
ENSLAFG00000003178	PUM1	100	74.564	ENSKMAG00000003481	pum1	100	76.183	Kryptolebias_marmoratus
ENSLAFG00000003178	PUM1	100	74.188	ENSLBEG00000002527	pum1	100	75.977	Labrus_bergylta
ENSLAFG00000003178	PUM1	100	86.178	ENSLACG00000017188	PUM1	99	86.345	Latimeria_chalumnae
ENSLAFG00000003178	PUM1	100	86.895	ENSLOCG00000005210	pum1	99	87.563	Lepisosteus_oculatus
ENSLAFG00000003178	PUM1	100	98.659	ENSMFAG00000010291	PUM1	100	99.034	Macaca_fascicularis
ENSLAFG00000003178	PUM1	100	98.659	ENSMMUG00000013520	PUM1	100	98.659	Macaca_mulatta
ENSLAFG00000003178	PUM1	100	98.907	ENSMNEG00000034639	PUM1	100	98.907	Macaca_nemestrina
ENSLAFG00000003178	PUM1	100	98.907	ENSMLEG00000038743	PUM1	100	98.551	Mandrillus_leucophaeus
ENSLAFG00000003178	PUM1	100	74.896	ENSMAMG00000011606	pum1	100	76.515	Mastacembelus_armatus
ENSLAFG00000003178	PUM1	100	74.586	ENSMZEG00005005834	pum1	100	76.515	Maylandia_zebra
ENSLAFG00000003178	PUM1	100	97.225	ENSMGAG00000000724	PUM1	100	97.225	Meleagris_gallopavo
ENSLAFG00000003178	PUM1	100	98.234	ENSMAUG00000022090	Pum1	100	98.234	Mesocricetus_auratus
ENSLAFG00000003178	PUM1	99	96.462	ENSMICG00000012213	-	99	96.462	Microcebus_murinus
ENSLAFG00000003178	PUM1	100	98.654	ENSMICG00000007713	-	100	98.654	Microcebus_murinus
ENSLAFG00000003178	PUM1	100	98.150	ENSMOCG00000015463	Pum1	100	98.150	Microtus_ochrogaster
ENSLAFG00000003178	PUM1	90	87.356	ENSMMOG00000019817	pum1	100	89.880	Mola_mola
ENSLAFG00000003178	PUM1	100	97.481	ENSMODG00000017067	PUM1	100	97.481	Monodelphis_domestica
ENSLAFG00000003178	PUM1	100	97.897	MGP_CAROLIEiJ_G0026549	Pum1	100	97.897	Mus_caroli
ENSLAFG00000003178	PUM1	100	98.150	ENSMUSG00000028580	Pum1	100	98.150	Mus_musculus
ENSLAFG00000003178	PUM1	100	97.981	MGP_PahariEiJ_G0028881	Pum1	100	97.981	Mus_pahari
ENSLAFG00000003178	PUM1	100	98.066	MGP_SPRETEiJ_G0027529	Pum1	100	98.066	Mus_spretus
ENSLAFG00000003178	PUM1	100	98.402	ENSMPUG00000015454	PUM1	100	98.402	Mustela_putorius_furo
ENSLAFG00000003178	PUM1	100	98.570	ENSMLUG00000006490	PUM1	100	98.570	Myotis_lucifugus
ENSLAFG00000003178	PUM1	100	98.486	ENSNGAG00000002378	Pum1	100	98.486	Nannospalax_galili
ENSLAFG00000003178	PUM1	80	81.582	ENSNBRG00000010689	pum1	100	83.231	Neolamprologus_brichardi
ENSLAFG00000003178	PUM1	100	97.477	ENSNLEG00000001151	PUM1	100	97.222	Nomascus_leucogenys
ENSLAFG00000003178	PUM1	84	96.284	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSLAFG00000003178	PUM1	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSLAFG00000003178	PUM1	100	98.318	ENSODEG00000003465	PUM1	100	98.318	Octodon_degus
ENSLAFG00000003178	PUM1	100	75.082	ENSONIG00000002290	pum1	100	76.763	Oreochromis_niloticus
ENSLAFG00000003178	PUM1	81	76.302	ENSOANG00000004902	-	100	75.894	Ornithorhynchus_anatinus
ENSLAFG00000003178	PUM1	100	98.234	ENSOCUG00000008641	PUM1	99	98.234	Oryctolagus_cuniculus
ENSLAFG00000003178	PUM1	100	74.587	ENSORLG00000011482	pum1	100	76.261	Oryzias_latipes
ENSLAFG00000003178	PUM1	100	74.670	ENSORLG00020019461	pum1	100	76.261	Oryzias_latipes_hni
ENSLAFG00000003178	PUM1	100	74.670	ENSORLG00015011375	pum1	100	76.344	Oryzias_latipes_hsok
ENSLAFG00000003178	PUM1	100	96.134	ENSOGAG00000011063	PUM1	100	96.134	Otolemur_garnettii
ENSLAFG00000003178	PUM1	100	98.066	ENSOARG00000001899	PUM1	100	98.792	Ovis_aries
ENSLAFG00000003178	PUM1	100	98.907	ENSPPAG00000044003	PUM1	100	98.659	Pan_paniscus
ENSLAFG00000003178	PUM1	100	98.907	ENSPPRG00000001370	PUM1	100	98.383	Panthera_pardus
ENSLAFG00000003178	PUM1	100	98.738	ENSPTIG00000010798	PUM1	100	98.134	Panthera_tigris_altaica
ENSLAFG00000003178	PUM1	100	98.907	ENSPTRG00000000453	PUM1	100	98.659	Pan_troglodytes
ENSLAFG00000003178	PUM1	100	98.907	ENSPANG00000016338	PUM1	100	99.034	Papio_anubis
ENSLAFG00000003178	PUM1	100	78.164	ENSPKIG00000010578	pum1	100	78.071	Paramormyrops_kingsleyae
ENSLAFG00000003178	PUM1	100	97.393	ENSPSIG00000014118	PUM1	100	97.393	Pelodiscus_sinensis
ENSLAFG00000003178	PUM1	80	80.049	ENSPMGG00000005836	pum1	100	81.807	Periophthalmus_magnuspinnatus
ENSLAFG00000003178	PUM1	100	98.318	ENSPEMG00000010009	Pum1	100	98.318	Peromyscus_maniculatus_bairdii
ENSLAFG00000003178	PUM1	100	97.565	ENSPCIG00000014151	PUM1	100	97.826	Phascolarctos_cinereus
ENSLAFG00000003178	PUM1	95	77.671	ENSPFOG00000007289	pum1	99	83.792	Poecilia_formosa
ENSLAFG00000003178	PUM1	100	73.612	ENSPLAG00000007256	pum1	100	78.157	Poecilia_latipinna
ENSLAFG00000003178	PUM1	90	77.716	ENSPMEG00000019543	pum1	99	78.309	Poecilia_mexicana
ENSLAFG00000003178	PUM1	100	74.752	ENSPREG00000005195	pum1	100	80.872	Poecilia_reticulata
ENSLAFG00000003178	PUM1	100	96.950	ENSPPYG00000001621	PUM1	100	96.950	Pongo_abelii
ENSLAFG00000003178	PUM1	77	100.000	ENSPCAG00000001979	PUM1	74	100.000	Procavia_capensis
ENSLAFG00000003178	PUM1	100	98.654	ENSPCOG00000004398	PUM1	100	98.654	Propithecus_coquereli
ENSLAFG00000003178	PUM1	100	96.720	ENSPVAG00000005207	PUM1	97	96.720	Pteropus_vampyrus
ENSLAFG00000003178	PUM1	100	74.669	ENSPNYG00000009518	pum1	100	83.373	Pundamilia_nyererei
ENSLAFG00000003178	PUM1	100	78.679	ENSPNAG00000026728	pum1	100	79.458	Pygocentrus_nattereri
ENSLAFG00000003178	PUM1	100	97.897	ENSRNOG00000011709	Pum1	100	97.897	Rattus_norvegicus
ENSLAFG00000003178	PUM1	100	98.907	ENSRBIG00000042521	PUM1	100	99.034	Rhinopithecus_bieti
ENSLAFG00000003178	PUM1	100	98.907	ENSRROG00000020156	PUM1	100	98.738	Rhinopithecus_roxellana
ENSLAFG00000003178	PUM1	100	98.823	ENSSBOG00000032037	PUM1	100	98.823	Saimiri_boliviensis_boliviensis
ENSLAFG00000003178	PUM1	100	97.397	ENSSHAG00000010918	PUM1	100	97.397	Sarcophilus_harrisii
ENSLAFG00000003178	PUM1	90	89.425	ENSSMAG00000010918	pum1	100	92.530	Scophthalmus_maximus
ENSLAFG00000003178	PUM1	100	74.896	ENSSDUG00000009021	pum1	100	76.763	Seriola_dumerili
ENSLAFG00000003178	PUM1	95	76.452	ENSSLDG00000009667	pum1	100	78.675	Seriola_lalandi_dorsalis
ENSLAFG00000003178	PUM1	94	98.673	ENSSARG00000003055	PUM1	91	98.673	Sorex_araneus
ENSLAFG00000003178	PUM1	100	96.720	ENSSPUG00000006267	PUM1	100	96.720	Sphenodon_punctatus
ENSLAFG00000003178	PUM1	90	92.530	ENSSPAG00000016636	pum1	100	92.530	Stegastes_partitus
ENSLAFG00000003178	PUM1	100	99.075	ENSSSCG00000003591	PUM1	100	99.275	Sus_scrofa
ENSLAFG00000003178	PUM1	100	74.792	ENSTRUG00000013121	pum1	100	82.984	Takifugu_rubripes
ENSLAFG00000003178	PUM1	100	74.896	ENSTNIG00000016983	pum1	99	76.515	Tetraodon_nigroviridis
ENSLAFG00000003178	PUM1	87	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSLAFG00000003178	PUM1	92	98.906	ENSTTRG00000007436	PUM1	90	98.906	Tursiops_truncatus
ENSLAFG00000003178	PUM1	99	98.157	ENSUAMG00000018262	-	100	98.157	Ursus_americanus
ENSLAFG00000003178	PUM1	95	96.377	ENSUMAG00000009211	PUM1	100	99.275	Ursus_maritimus
ENSLAFG00000003178	PUM1	92	98.881	ENSVPAG00000005902	PUM1	92	98.881	Vicugna_pacos
ENSLAFG00000003178	PUM1	100	98.823	ENSVVUG00000014631	PUM1	100	99.275	Vulpes_vulpes
ENSLAFG00000003178	PUM1	100	87.238	ENSXETG00000012904	pum1	99	86.398	Xenopus_tropicalis
ENSLAFG00000003178	PUM1	100	74.007	ENSXMAG00000002945	pum1	100	78.054	Xiphophorus_maculatus