EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000003238 (Gene tree)
Gene ID: -
Gene Symbol: STAU1
Alias: PPP1R150|STAU
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 24816 bases
Position: chrscaffold_19:48234295-48259110
Accession: 11370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002693	dsrm	PF00035.26	1.1e-33	1	3
ENSLAFP00000002693	dsrm	PF00035.26	1.1e-33	2	3
ENSLAFP00000002693	dsrm	PF00035.26	1.1e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000003237	STAU1-201	1530	-	ENSLAFP00000002693	509 (aa)	-	G3SRZ9

Gene Model

Click here to download ENSLAFG00000003238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000003238	STAU1	85	52.643	ENSLAFG00000013327	STAU2	74	52.516

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003238	STAU1	100	95.481	ENSG00000124214	STAU1	100	95.363	Homo_sapiens
ENSLAFG00000003238	STAU1	99	73.735	ENSAPOG00000017260	stau1	74	73.735	Acanthochromis_polyacanthus
ENSLAFG00000003238	STAU1	99	93.861	ENSAMEG00000013681	STAU1	72	93.861	Ailuropoda_melanoleuca
ENSLAFG00000003238	STAU1	99	74.950	ENSACIG00000015918	stau1	73	75.595	Amphilophus_citrinellus
ENSLAFG00000003238	STAU1	99	74.708	ENSAOCG00000012224	stau1	74	74.708	Amphiprion_ocellaris
ENSLAFG00000003238	STAU1	99	74.903	ENSAPEG00000012308	stau1	74	74.903	Amphiprion_percula
ENSLAFG00000003238	STAU1	99	74.902	ENSATEG00000024600	stau1	76	74.902	Anabas_testudineus
ENSLAFG00000003238	STAU1	99	88.063	ENSAPLG00000010527	STAU1	72	88.063	Anas_platyrhynchos
ENSLAFG00000003238	STAU1	99	87.891	ENSACAG00000015909	STAU1	73	87.891	Anolis_carolinensis
ENSLAFG00000003238	STAU1	100	93.981	ENSANAG00000032714	STAU1	100	89.516	Aotus_nancymaae
ENSLAFG00000003238	STAU1	99	73.346	ENSACLG00000012270	stau1	74	73.346	Astatotilapia_calliptera
ENSLAFG00000003238	STAU1	100	73.828	ENSAMXG00000016812	stau1	88	73.828	Astyanax_mexicanus
ENSLAFG00000003238	STAU1	100	94.499	ENSBTAG00000000241	STAU1	88	94.499	Bos_taurus
ENSLAFG00000003238	STAU1	100	95.088	ENSCJAG00000016233	STAU1	88	95.088	Callithrix_jacchus
ENSLAFG00000003238	STAU1	100	94.303	ENSCAFG00000011347	STAU1	86	94.303	Canis_familiaris
ENSLAFG00000003238	STAU1	100	93.023	ENSCAFG00020017123	STAU1	85	93.023	Canis_lupus_dingo
ENSLAFG00000003238	STAU1	100	94.303	ENSCHIG00000001799	-	100	86.410	Capra_hircus
ENSLAFG00000003238	STAU1	100	92.534	ENSTSYG00000036179	-	88	92.534	Carlito_syrichta
ENSLAFG00000003238	STAU1	97	91.129	ENSCAPG00000017041	STAU1	100	91.129	Cavia_aperea
ENSLAFG00000003238	STAU1	96	89.293	ENSCPOG00000005566	STAU1	100	89.293	Cavia_porcellus
ENSLAFG00000003238	STAU1	100	94.175	ENSCCAG00000034339	STAU1	88	94.175	Cebus_capucinus
ENSLAFG00000003238	STAU1	100	95.285	ENSCATG00000028474	STAU1	100	94.024	Cercocebus_atys
ENSLAFG00000003238	STAU1	96	93.131	ENSCLAG00000006516	-	100	93.131	Chinchilla_lanigera
ENSLAFG00000003238	STAU1	97	76.305	ENSCLAG00000002784	-	100	76.305	Chinchilla_lanigera
ENSLAFG00000003238	STAU1	97	94.960	ENSCSAG00000014986	STAU1	100	94.960	Chlorocebus_sabaeus
ENSLAFG00000003238	STAU1	100	95.294	ENSCHOG00000001511	STAU1	88	95.294	Choloepus_hoffmanni
ENSLAFG00000003238	STAU1	99	88.281	ENSCPBG00000026741	STAU1	73	88.281	Chrysemys_picta_bellii
ENSLAFG00000003238	STAU1	100	95.088	ENSCANG00000039220	STAU1	100	85.513	Colobus_angolensis_palliatus
ENSLAFG00000003238	STAU1	96	88.283	ENSCGRG00001013453	Stau1	100	88.283	Cricetulus_griseus_chok1gshd
ENSLAFG00000003238	STAU1	96	88.283	ENSCGRG00000007216	Stau1	100	88.283	Cricetulus_griseus_crigri
ENSLAFG00000003238	STAU1	99	67.520	ENSCSEG00000000792	stau1	71	68.235	Cynoglossus_semilaevis
ENSLAFG00000003238	STAU1	99	72.079	ENSCVAG00000005906	stau1	89	72.727	Cyprinodon_variegatus
ENSLAFG00000003238	STAU1	99	73.346	ENSDARG00000044182	stau1	81	73.346	Danio_rerio
ENSLAFG00000003238	STAU1	100	95.882	ENSDNOG00000014933	STAU1	86	95.882	Dasypus_novemcinctus
ENSLAFG00000003238	STAU1	96	89.571	ENSDORG00000030220	Stau1	100	89.571	Dipodomys_ordii
ENSLAFG00000003238	STAU1	86	98.519	ENSETEG00000018235	STAU1	76	98.519	Echinops_telfairi
ENSLAFG00000003238	STAU1	100	94.892	ENSEASG00005023343	STAU1	88	93.786	Equus_asinus_asinus
ENSLAFG00000003238	STAU1	100	95.088	ENSECAG00000012894	STAU1	88	95.088	Equus_caballus
ENSLAFG00000003238	STAU1	89	93.418	ENSEEUG00000014344	STAU1	68	93.418	Erinaceus_europaeus
ENSLAFG00000003238	STAU1	99	73.563	ENSELUG00000002529	stau1	80	73.563	Esox_lucius
ENSLAFG00000003238	STAU1	100	94.892	ENSFCAG00000001447	STAU1	100	87.903	Felis_catus
ENSLAFG00000003238	STAU1	99	87.549	ENSFALG00000012940	STAU1	73	87.549	Ficedula_albicollis
ENSLAFG00000003238	STAU1	97	71.630	ENSFDAG00000020837	-	100	71.630	Fukomys_damarensis
ENSLAFG00000003238	STAU1	96	92.121	ENSFDAG00000014119	-	100	92.121	Fukomys_damarensis
ENSLAFG00000003238	STAU1	99	72.994	ENSFHEG00000013517	stau1	88	73.123	Fundulus_heteroclitus
ENSLAFG00000003238	STAU1	99	63.396	ENSGMOG00000016850	stau1	74	63.396	Gadus_morhua
ENSLAFG00000003238	STAU1	99	89.526	ENSGALG00000004736	STAU1	73	89.526	Gallus_gallus
ENSLAFG00000003238	STAU1	99	74.168	ENSGAFG00000010437	stau1	73	74.168	Gambusia_affinis
ENSLAFG00000003238	STAU1	99	73.398	ENSGACG00000001352	stau1	75	73.398	Gasterosteus_aculeatus
ENSLAFG00000003238	STAU1	99	88.933	ENSGAGG00000009825	STAU1	73	88.933	Gopherus_agassizii
ENSLAFG00000003238	STAU1	97	94.024	ENSGGOG00000025351	STAU1	100	94.247	Gorilla_gorilla
ENSLAFG00000003238	STAU1	99	73.541	ENSHBUG00000023668	stau1	74	73.541	Haplochromis_burtoni
ENSLAFG00000003238	STAU1	96	94.274	ENSHGLG00000008730	STAU1	100	94.274	Heterocephalus_glaber_female
ENSLAFG00000003238	STAU1	96	94.274	ENSHGLG00100000098	STAU1	100	94.274	Heterocephalus_glaber_male
ENSLAFG00000003238	STAU1	98	71.485	ENSHCOG00000018461	stau1	72	71.485	Hippocampus_comes
ENSLAFG00000003238	STAU1	94	74.741	ENSIPUG00000023725	stau1	73	74.741	Ictalurus_punctatus
ENSLAFG00000003238	STAU1	96	93.456	ENSSTOG00000003634	STAU1	100	93.456	Ictidomys_tridecemlineatus
ENSLAFG00000003238	STAU1	96	91.411	ENSJJAG00000020032	Stau1	100	91.411	Jaculus_jaculus
ENSLAFG00000003238	STAU1	99	72.549	ENSKMAG00000007135	stau1	74	73.190	Kryptolebias_marmoratus
ENSLAFG00000003238	STAU1	99	72.447	ENSLBEG00000020172	stau1	74	72.447	Labrus_bergylta
ENSLAFG00000003238	STAU1	99	82.941	ENSLACG00000016157	STAU1	71	82.941	Latimeria_chalumnae
ENSLAFG00000003238	STAU1	99	80.588	ENSLOCG00000003134	stau1	73	80.588	Lepisosteus_oculatus
ENSLAFG00000003238	STAU1	100	95.285	ENSMFAG00000040931	STAU1	99	95.941	Macaca_fascicularis
ENSLAFG00000003238	STAU1	97	94.024	ENSMMUG00000002302	STAU1	99	95.941	Macaca_mulatta
ENSLAFG00000003238	STAU1	100	95.285	ENSMNEG00000033821	STAU1	100	94.024	Macaca_nemestrina
ENSLAFG00000003238	STAU1	100	95.088	ENSMLEG00000031383	STAU1	88	95.088	Mandrillus_leucophaeus
ENSLAFG00000003238	STAU1	99	75.490	ENSMAMG00000017586	stau1	77	75.490	Mastacembelus_armatus
ENSLAFG00000003238	STAU1	99	73.346	ENSMZEG00005015605	stau1	74	73.346	Maylandia_zebra
ENSLAFG00000003238	STAU1	99	88.258	ENSMGAG00000004719	STAU1	72	88.258	Meleagris_gallopavo
ENSLAFG00000003238	STAU1	96	88.283	ENSMAUG00000013846	Stau1	100	88.283	Mesocricetus_auratus
ENSLAFG00000003238	STAU1	100	93.010	ENSMICG00000001995	STAU1	88	93.010	Microcebus_murinus
ENSLAFG00000003238	STAU1	96	89.775	ENSMOCG00000018743	Stau1	100	89.495	Microtus_ochrogaster
ENSLAFG00000003238	STAU1	97	73.843	ENSMMOG00000015455	stau1	99	74.096	Mola_mola
ENSLAFG00000003238	STAU1	100	92.141	ENSMODG00000016276	STAU1	76	92.141	Monodelphis_domestica
ENSLAFG00000003238	STAU1	99	74.708	ENSMALG00000000045	stau1	74	74.708	Monopterus_albus
ENSLAFG00000003238	STAU1	96	89.366	MGP_CAROLIEiJ_G0024699	Stau1	100	89.366	Mus_caroli
ENSLAFG00000003238	STAU1	96	88.957	ENSMUSG00000039536	Stau1	100	88.957	Mus_musculus
ENSLAFG00000003238	STAU1	96	89.162	MGP_PahariEiJ_G0026141	Stau1	100	89.162	Mus_pahari
ENSLAFG00000003238	STAU1	96	88.548	MGP_SPRETEiJ_G0025619	Stau1	100	88.548	Mus_spretus
ENSLAFG00000003238	STAU1	99	93.861	ENSMPUG00000017581	STAU1	75	93.861	Mustela_putorius_furo
ENSLAFG00000003238	STAU1	100	94.106	ENSMLUG00000008407	STAU1	86	94.106	Myotis_lucifugus
ENSLAFG00000003238	STAU1	96	92.323	ENSNGAG00000007108	Stau1	100	92.323	Nannospalax_galili
ENSLAFG00000003238	STAU1	99	73.541	ENSNBRG00000017596	stau1	74	73.541	Neolamprologus_brichardi
ENSLAFG00000003238	STAU1	100	94.695	ENSNLEG00000006955	STAU1	100	93.426	Nomascus_leucogenys
ENSLAFG00000003238	STAU1	91	92.424	ENSMEUG00000003263	STAU1	80	92.424	Notamacropus_eugenii
ENSLAFG00000003238	STAU1	99	90.177	ENSOPRG00000014569	STAU1	89	90.177	Ochotona_princeps
ENSLAFG00000003238	STAU1	97	93.750	ENSODEG00000006523	STAU1	100	93.750	Octodon_degus
ENSLAFG00000003238	STAU1	99	73.735	ENSONIG00000004152	stau1	71	73.735	Oreochromis_niloticus
ENSLAFG00000003238	STAU1	99	88.867	ENSOANG00000006394	STAU1	73	88.867	Ornithorhynchus_anatinus
ENSLAFG00000003238	STAU1	100	92.338	ENSOCUG00000006214	STAU1	88	92.338	Oryctolagus_cuniculus
ENSLAFG00000003238	STAU1	99	72.745	ENSOMEG00000002388	stau1	74	72.461	Oryzias_melastigma
ENSLAFG00000003238	STAU1	100	94.695	ENSOGAG00000002127	STAU1	86	94.695	Otolemur_garnettii
ENSLAFG00000003238	STAU1	97	63.473	ENSOGAG00000028222	-	99	63.911	Otolemur_garnettii
ENSLAFG00000003238	STAU1	100	94.303	ENSOARG00000012204	STAU1	86	94.303	Ovis_aries
ENSLAFG00000003238	STAU1	97	94.024	ENSPPAG00000032023	STAU1	100	94.247	Pan_paniscus
ENSLAFG00000003238	STAU1	100	94.892	ENSPPRG00000003436	STAU1	100	94.758	Panthera_pardus
ENSLAFG00000003238	STAU1	100	94.892	ENSPTIG00000011768	STAU1	100	93.439	Panthera_tigris_altaica
ENSLAFG00000003238	STAU1	97	94.024	ENSPTRG00000023130	STAU1	100	94.247	Pan_troglodytes
ENSLAFG00000003238	STAU1	100	95.285	ENSPANG00000020560	STAU1	100	89.537	Papio_anubis
ENSLAFG00000003238	STAU1	99	75.097	ENSPKIG00000024588	stau1	74	75.097	Paramormyrops_kingsleyae
ENSLAFG00000003238	STAU1	99	88.933	ENSPSIG00000010731	STAU1	73	88.933	Pelodiscus_sinensis
ENSLAFG00000003238	STAU1	99	74.414	ENSPMGG00000018553	stau1	99	72.470	Periophthalmus_magnuspinnatus
ENSLAFG00000003238	STAU1	96	88.889	ENSPEMG00000022045	Stau1	100	88.889	Peromyscus_maniculatus_bairdii
ENSLAFG00000003238	STAU1	100	92.338	ENSPCIG00000023269	STAU1	97	92.141	Phascolarctos_cinereus
ENSLAFG00000003238	STAU1	99	74.023	ENSPFOG00000017253	stau1	73	74.023	Poecilia_formosa
ENSLAFG00000003238	STAU1	63	69.632	ENSPLAG00000014829	stau1	81	71.166	Poecilia_latipinna
ENSLAFG00000003238	STAU1	93	73.333	ENSPMEG00000007495	stau1	70	73.333	Poecilia_mexicana
ENSLAFG00000003238	STAU1	99	73.633	ENSPREG00000003477	stau1	73	73.633	Poecilia_reticulata
ENSLAFG00000003238	STAU1	100	94.695	ENSPPYG00000011111	STAU1	88	94.695	Pongo_abelii
ENSLAFG00000003238	STAU1	94	89.076	ENSPCAG00000002459	STAU1	88	89.076	Procavia_capensis
ENSLAFG00000003238	STAU1	100	94.303	ENSPCOG00000027746	STAU1	100	93.028	Propithecus_coquereli
ENSLAFG00000003238	STAU1	85	96.094	ENSPVAG00000015019	STAU1	75	96.094	Pteropus_vampyrus
ENSLAFG00000003238	STAU1	99	73.541	ENSPNYG00000014436	stau1	74	73.541	Pundamilia_nyererei
ENSLAFG00000003238	STAU1	99	72.868	ENSPNAG00000011323	stau1	80	73.256	Pygocentrus_nattereri
ENSLAFG00000003238	STAU1	96	88.485	ENSRNOG00000007781	Stau1	100	88.485	Rattus_norvegicus
ENSLAFG00000003238	STAU1	97	94.556	ENSRBIG00000037345	STAU1	100	94.556	Rhinopithecus_bieti
ENSLAFG00000003238	STAU1	100	95.285	ENSRROG00000039008	STAU1	100	94.589	Rhinopithecus_roxellana
ENSLAFG00000003238	STAU1	100	95.285	ENSSBOG00000034448	STAU1	100	91.331	Saimiri_boliviensis_boliviensis
ENSLAFG00000003238	STAU1	100	92.338	ENSSHAG00000009492	STAU1	86	92.338	Sarcophilus_harrisii
ENSLAFG00000003238	STAU1	99	76.863	ENSSFOG00015021497	stau1	89	73.774	Scleropages_formosus
ENSLAFG00000003238	STAU1	99	74.708	ENSSMAG00000017410	stau1	74	74.708	Scophthalmus_maximus
ENSLAFG00000003238	STAU1	99	75.292	ENSSDUG00000019439	stau1	74	75.292	Seriola_dumerili
ENSLAFG00000003238	STAU1	99	75.292	ENSSLDG00000025040	stau1	74	75.292	Seriola_lalandi_dorsalis
ENSLAFG00000003238	STAU1	59	93.333	ENSSARG00000010389	-	52	93.333	Sorex_araneus
ENSLAFG00000003238	STAU1	99	87.305	ENSSPUG00000017983	STAU1	76	87.280	Sphenodon_punctatus
ENSLAFG00000003238	STAU1	99	74.903	ENSSPAG00000019275	stau1	74	74.903	Stegastes_partitus
ENSLAFG00000003238	STAU1	100	95.481	ENSSSCG00000027444	STAU1	100	95.363	Sus_scrofa
ENSLAFG00000003238	STAU1	99	87.695	ENSTGUG00000008784	STAU1	72	87.695	Taeniopygia_guttata
ENSLAFG00000003238	STAU1	99	75.294	ENSTRUG00000005837	stau1	73	75.930	Takifugu_rubripes
ENSLAFG00000003238	STAU1	99	73.152	ENSTNIG00000014732	stau1	76	73.152	Tetraodon_nigroviridis
ENSLAFG00000003238	STAU1	100	80.980	ENSTBEG00000009404	STAU1	88	80.980	Tupaia_belangeri
ENSLAFG00000003238	STAU1	91	91.126	ENSTTRG00000004285	STAU1	80	91.126	Tursiops_truncatus
ENSLAFG00000003238	STAU1	97	92.445	ENSUAMG00000025449	STAU1	100	92.445	Ursus_americanus
ENSLAFG00000003238	STAU1	73	91.005	ENSUMAG00000024475	STAU1	89	91.005	Ursus_maritimus
ENSLAFG00000003238	STAU1	100	95.285	ENSVPAG00000001313	STAU1	88	95.285	Vicugna_pacos
ENSLAFG00000003238	STAU1	100	93.217	ENSVVUG00000022325	STAU1	76	93.217	Vulpes_vulpes
ENSLAFG00000003238	STAU1	99	82.249	ENSXETG00000001783	stau1	73	82.446	Xenopus_tropicalis
ENSLAFG00000003238	STAU1	56	72.378	ENSXCOG00000008804	stau1	76	71.854	Xiphophorus_couchianus
ENSLAFG00000003238	STAU1	99	74.168	ENSXMAG00000016175	stau1	73	74.168	Xiphophorus_maculatus