EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000003249 (Gene tree)
Gene ID: -
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 23031 bases
Position: chrscaffold_31:29618308-29641338
Accession: 100669300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000025332	ResIII	PF04851.15	8.1e-07	1	1
ENSLAFP00000002700	ResIII	PF04851.15	1.3e-06	1	1
ENSLAFP00000002700	DEAD	PF00270.29	1.6e-49	1	1
ENSLAFP00000025332	DEAD	PF00270.29	1.6e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000029546	DDX42-201	2805	-	ENSLAFP00000025332	934 (aa)	XP_003414374	G3UBX4
ENSLAFT00000003249	DDX42-202	2790	-	ENSLAFP00000002700	929 (aa)	-	G3SS06

Gene Model

Click here to download ENSLAFG00000003249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000003249	DDX42	59	37.814	ENSLAFG00000004461	DDX5	85	37.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003249	DDX42	100	96.273	ENSG00000198231	DDX42	100	99.038	Homo_sapiens
ENSLAFG00000003249	DDX42	91	76.285	ENSAPOG00000017675	ddx42	96	75.949	Acanthochromis_polyacanthus
ENSLAFG00000003249	DDX42	100	97.115	ENSAMEG00000003200	DDX42	100	97.115	Ailuropoda_melanoleuca
ENSLAFG00000003249	DDX42	84	72.440	ENSACIG00000007376	ddx42	99	73.485	Amphilophus_citrinellus
ENSLAFG00000003249	DDX42	100	71.130	ENSAOCG00000003520	ddx42	99	73.326	Amphiprion_ocellaris
ENSLAFG00000003249	DDX42	100	72.281	ENSAPEG00000000984	ddx42	99	73.114	Amphiprion_percula
ENSLAFG00000003249	DDX42	100	72.122	ENSATEG00000022920	ddx42	99	73.178	Anabas_testudineus
ENSLAFG00000003249	DDX42	100	84.794	ENSAPLG00000010544	DDX42	100	83.003	Anas_platyrhynchos
ENSLAFG00000003249	DDX42	100	84.345	ENSACAG00000003994	DDX42	99	84.492	Anolis_carolinensis
ENSLAFG00000003249	DDX42	100	96.364	ENSANAG00000035693	DDX42	100	96.364	Aotus_nancymaae
ENSLAFG00000003249	DDX42	91	76.491	ENSACLG00000025113	ddx42	99	72.497	Astatotilapia_calliptera
ENSLAFG00000003249	DDX42	100	94.931	ENSBTAG00000021058	DDX42	100	94.931	Bos_taurus
ENSLAFG00000003249	DDX42	64	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSLAFG00000003249	DDX42	100	96.578	ENSCJAG00000019649	DDX42	99	98.433	Callithrix_jacchus
ENSLAFG00000003249	DDX42	100	97.005	ENSCAFG00000012818	DDX42	100	97.005	Canis_familiaris
ENSLAFG00000003249	DDX42	100	97.112	ENSCAFG00020026631	DDX42	100	97.112	Canis_lupus_dingo
ENSLAFG00000003249	DDX42	100	96.060	ENSCHIG00000014431	DDX42	100	96.060	Capra_hircus
ENSLAFG00000003249	DDX42	100	95.833	ENSTSYG00000001380	DDX42	100	95.833	Carlito_syrichta
ENSLAFG00000003249	DDX42	73	75.480	ENSCAPG00000013621	DDX42	94	75.480	Cavia_aperea
ENSLAFG00000003249	DDX42	100	95.815	ENSCPOG00000005633	DDX42	100	95.815	Cavia_porcellus
ENSLAFG00000003249	DDX42	100	91.016	ENSCCAG00000020612	DDX42	100	95.931	Cebus_capucinus
ENSLAFG00000003249	DDX42	100	96.043	ENSCATG00000030490	DDX42	100	96.043	Cercocebus_atys
ENSLAFG00000003249	DDX42	100	96.245	ENSCLAG00000003497	DDX42	100	96.245	Chinchilla_lanigera
ENSLAFG00000003249	DDX42	100	92.267	ENSCSAG00000003914	DDX42	100	92.267	Chlorocebus_sabaeus
ENSLAFG00000003249	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSLAFG00000003249	DDX42	100	84.519	ENSCPBG00000026682	DDX42	100	84.100	Chrysemys_picta_bellii
ENSLAFG00000003249	DDX42	100	96.150	ENSCANG00000034663	DDX42	99	97.410	Colobus_angolensis_palliatus
ENSLAFG00000003249	DDX42	100	94.973	ENSCGRG00001009775	Ddx42	100	95.161	Cricetulus_griseus_chok1gshd
ENSLAFG00000003249	DDX42	100	94.973	ENSCGRG00000011718	Ddx42	100	95.161	Cricetulus_griseus_crigri
ENSLAFG00000003249	DDX42	91	74.209	ENSCSEG00000021574	ddx42	99	71.368	Cynoglossus_semilaevis
ENSLAFG00000003249	DDX42	100	71.199	ENSCVAG00000011404	ddx42	100	71.078	Cyprinodon_variegatus
ENSLAFG00000003249	DDX42	100	69.215	ENSDARG00000037928	ddx42	100	71.039	Danio_rerio
ENSLAFG00000003249	DDX42	100	89.765	ENSDNOG00000007961	DDX42	100	89.765	Dasypus_novemcinctus
ENSLAFG00000003249	DDX42	100	87.646	ENSDORG00000004199	Ddx42	100	87.487	Dipodomys_ordii
ENSLAFG00000003249	DDX42	66	60.353	FBgn0036104	CG6418	93	53.504	Drosophila_melanogaster
ENSLAFG00000003249	DDX42	80	73.642	ENSEBUG00000001155	ddx42	91	73.642	Eptatretus_burgeri
ENSLAFG00000003249	DDX42	100	97.540	ENSEASG00005013089	DDX42	100	97.540	Equus_asinus_asinus
ENSLAFG00000003249	DDX42	100	97.647	ENSECAG00000022684	DDX42	100	97.647	Equus_caballus
ENSLAFG00000003249	DDX42	67	100.000	ENSEEUG00000009144	DDX42	82	100.000	Erinaceus_europaeus
ENSLAFG00000003249	DDX42	100	70.706	ENSELUG00000020593	ddx42	100	70.626	Esox_lucius
ENSLAFG00000003249	DDX42	100	97.540	ENSFCAG00000003499	DDX42	100	97.540	Felis_catus
ENSLAFG00000003249	DDX42	93	86.866	ENSFALG00000004675	DDX42	72	90.378	Ficedula_albicollis
ENSLAFG00000003249	DDX42	100	95.731	ENSFDAG00000020516	DDX42	100	95.731	Fukomys_damarensis
ENSLAFG00000003249	DDX42	100	70.426	ENSFHEG00000023290	ddx42	99	71.308	Fundulus_heteroclitus
ENSLAFG00000003249	DDX42	76	77.997	ENSGMOG00000004595	ddx42	79	78.138	Gadus_morhua
ENSLAFG00000003249	DDX42	100	83.264	ENSGALG00000000581	DDX42	100	83.368	Gallus_gallus
ENSLAFG00000003249	DDX42	96	72.545	ENSGAFG00000011846	ddx42	97	73.208	Gambusia_affinis
ENSLAFG00000003249	DDX42	100	67.941	ENSGACG00000009782	ddx42	100	67.983	Gasterosteus_aculeatus
ENSLAFG00000003249	DDX42	100	84.801	ENSGAGG00000024411	DDX42	99	83.945	Gopherus_agassizii
ENSLAFG00000003249	DDX42	100	96.471	ENSGGOG00000006779	DDX42	100	96.471	Gorilla_gorilla
ENSLAFG00000003249	DDX42	91	76.725	ENSHBUG00000008705	ddx42	99	72.708	Haplochromis_burtoni
ENSLAFG00000003249	DDX42	100	91.765	ENSHGLG00000010024	DDX42	100	91.765	Heterocephalus_glaber_female
ENSLAFG00000003249	DDX42	100	96.684	ENSHGLG00100004479	-	100	96.684	Heterocephalus_glaber_male
ENSLAFG00000003249	DDX42	94	73.516	ENSHGLG00100007138	-	95	73.516	Heterocephalus_glaber_male
ENSLAFG00000003249	DDX42	84	78.819	ENSHCOG00000003357	ddx42	99	75.982	Hippocampus_comes
ENSLAFG00000003249	DDX42	80	79.789	ENSIPUG00000013327	ddx42	100	69.905	Ictalurus_punctatus
ENSLAFG00000003249	DDX42	100	97.118	ENSSTOG00000008922	DDX42	100	97.118	Ictidomys_tridecemlineatus
ENSLAFG00000003249	DDX42	100	94.979	ENSJJAG00000011727	Ddx42	100	94.979	Jaculus_jaculus
ENSLAFG00000003249	DDX42	100	70.288	ENSKMAG00000009914	ddx42	99	72.737	Kryptolebias_marmoratus
ENSLAFG00000003249	DDX42	100	66.702	ENSLBEG00000004687	ddx42	100	67.373	Labrus_bergylta
ENSLAFG00000003249	DDX42	99	76.445	ENSLACG00000013476	DDX42	97	78.038	Latimeria_chalumnae
ENSLAFG00000003249	DDX42	100	74.651	ENSLOCG00000011764	ddx42	100	74.758	Lepisosteus_oculatus
ENSLAFG00000003249	DDX42	100	96.043	ENSMFAG00000031356	DDX42	100	96.043	Macaca_fascicularis
ENSLAFG00000003249	DDX42	100	95.527	ENSMMUG00000016762	DDX42	100	95.610	Macaca_mulatta
ENSLAFG00000003249	DDX42	100	96.043	ENSMNEG00000038250	DDX42	100	96.043	Macaca_nemestrina
ENSLAFG00000003249	DDX42	100	96.060	ENSMLEG00000043080	DDX42	100	96.060	Mandrillus_leucophaeus
ENSLAFG00000003249	DDX42	90	77.553	ENSMAMG00000021888	ddx42	98	73.312	Mastacembelus_armatus
ENSLAFG00000003249	DDX42	91	76.491	ENSMZEG00005023103	ddx42	99	72.497	Maylandia_zebra
ENSLAFG00000003249	DDX42	100	83.144	ENSMGAG00000001822	DDX42	100	83.473	Meleagris_gallopavo
ENSLAFG00000003249	DDX42	76	96.724	ENSMAUG00000020774	-	94	96.733	Mesocricetus_auratus
ENSLAFG00000003249	DDX42	100	96.791	ENSMICG00000009952	DDX42	100	96.150	Microcebus_murinus
ENSLAFG00000003249	DDX42	100	94.086	ENSMOCG00000015504	Ddx42	100	94.086	Microtus_ochrogaster
ENSLAFG00000003249	DDX42	91	72.079	ENSMMOG00000016963	ddx42	86	72.526	Mola_mola
ENSLAFG00000003249	DDX42	50	97.645	ENSMODG00000009917	-	98	97.645	Monodelphis_domestica
ENSLAFG00000003249	DDX42	100	71.702	ENSMALG00000007800	ddx42	99	72.669	Monopterus_albus
ENSLAFG00000003249	DDX42	100	95.187	MGP_CAROLIEiJ_G0017314	Ddx42	100	95.376	Mus_caroli
ENSLAFG00000003249	DDX42	100	95.401	ENSMUSG00000020705	Ddx42	100	95.591	Mus_musculus
ENSLAFG00000003249	DDX42	76	98.808	MGP_PahariEiJ_G0018444	-	99	99.106	Mus_pahari
ENSLAFG00000003249	DDX42	100	95.187	MGP_SPRETEiJ_G0018158	Ddx42	100	95.376	Mus_spretus
ENSLAFG00000003249	DDX42	100	96.493	ENSMPUG00000014921	DDX42	100	96.493	Mustela_putorius_furo
ENSLAFG00000003249	DDX42	100	95.364	ENSMLUG00000011645	DDX42	100	95.364	Myotis_lucifugus
ENSLAFG00000003249	DDX42	100	94.765	ENSNGAG00000021897	Ddx42	100	94.765	Nannospalax_galili
ENSLAFG00000003249	DDX42	91	75.322	ENSNBRG00000004466	ddx42	99	71.444	Neolamprologus_brichardi
ENSLAFG00000003249	DDX42	100	96.150	ENSNLEG00000004248	DDX42	99	97.557	Nomascus_leucogenys
ENSLAFG00000003249	DDX42	74	82.272	ENSMEUG00000013227	-	85	82.272	Notamacropus_eugenii
ENSLAFG00000003249	DDX42	100	95.416	ENSOPRG00000014960	DDX42	100	95.416	Ochotona_princeps
ENSLAFG00000003249	DDX42	100	92.521	ENSODEG00000007810	DDX42	100	92.521	Octodon_degus
ENSLAFG00000003249	DDX42	91	76.608	ENSONIG00000000734	ddx42	99	72.603	Oreochromis_niloticus
ENSLAFG00000003249	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSLAFG00000003249	DDX42	95	95.398	ENSOCUG00000004304	DDX42	88	95.613	Oryctolagus_cuniculus
ENSLAFG00000003249	DDX42	100	70.440	ENSORLG00000002395	ddx42	100	70.204	Oryzias_latipes
ENSLAFG00000003249	DDX42	100	71.053	ENSORLG00020011621	ddx42	100	70.750	Oryzias_latipes_hni
ENSLAFG00000003249	DDX42	100	70.842	ENSORLG00015004487	ddx42	100	70.433	Oryzias_latipes_hsok
ENSLAFG00000003249	DDX42	100	70.878	ENSOMEG00000020093	ddx42	100	71.565	Oryzias_melastigma
ENSLAFG00000003249	DDX42	100	96.695	ENSOGAG00000006872	DDX42	100	96.695	Otolemur_garnettii
ENSLAFG00000003249	DDX42	100	95.253	ENSOARG00000013540	DDX42	100	95.253	Ovis_aries
ENSLAFG00000003249	DDX42	100	96.364	ENSPPAG00000007496	DDX42	100	96.364	Pan_paniscus
ENSLAFG00000003249	DDX42	100	97.540	ENSPPRG00000002740	DDX42	100	97.540	Panthera_pardus
ENSLAFG00000003249	DDX42	100	97.326	ENSPTIG00000009932	DDX42	100	97.326	Panthera_tigris_altaica
ENSLAFG00000003249	DDX42	100	96.364	ENSPTRG00000009523	DDX42	100	96.364	Pan_troglodytes
ENSLAFG00000003249	DDX42	100	96.043	ENSPANG00000020990	DDX42	100	96.043	Papio_anubis
ENSLAFG00000003249	DDX42	100	69.989	ENSPKIG00000002901	ddx42	100	70.802	Paramormyrops_kingsleyae
ENSLAFG00000003249	DDX42	86	91.677	ENSPSIG00000010289	DDX42	98	91.502	Pelodiscus_sinensis
ENSLAFG00000003249	DDX42	100	67.375	ENSPMGG00000009323	ddx42	100	68.544	Periophthalmus_magnuspinnatus
ENSLAFG00000003249	DDX42	100	94.979	ENSPEMG00000006755	Ddx42	100	95.166	Peromyscus_maniculatus_bairdii
ENSLAFG00000003249	DDX42	80	72.084	ENSPMAG00000005580	ddx42	100	72.739	Petromyzon_marinus
ENSLAFG00000003249	DDX42	100	91.746	ENSPCIG00000009093	DDX42	100	90.688	Phascolarctos_cinereus
ENSLAFG00000003249	DDX42	100	71.686	ENSPFOG00000014104	ddx42	100	71.728	Poecilia_formosa
ENSLAFG00000003249	DDX42	100	71.686	ENSPLAG00000010522	ddx42	100	71.728	Poecilia_latipinna
ENSLAFG00000003249	DDX42	100	70.195	ENSPMEG00000010744	ddx42	100	71.028	Poecilia_mexicana
ENSLAFG00000003249	DDX42	100	70.217	ENSPREG00000009926	ddx42	100	71.458	Poecilia_reticulata
ENSLAFG00000003249	DDX42	100	93.955	ENSPPYG00000008531	DDX42	100	93.955	Pongo_abelii
ENSLAFG00000003249	DDX42	92	92.218	ENSPCAG00000002474	DDX42	100	92.218	Procavia_capensis
ENSLAFG00000003249	DDX42	100	87.166	ENSPCOG00000001559	DDX42	100	87.166	Propithecus_coquereli
ENSLAFG00000003249	DDX42	100	93.376	ENSPVAG00000000160	DDX42	100	93.376	Pteropus_vampyrus
ENSLAFG00000003249	DDX42	76	74.298	ENSPNYG00000013954	ddx42	97	69.814	Pundamilia_nyererei
ENSLAFG00000003249	DDX42	78	80.926	ENSPNAG00000017352	ddx42	100	70.031	Pygocentrus_nattereri
ENSLAFG00000003249	DDX42	100	95.080	ENSRNOG00000009474	Ddx42	100	95.269	Rattus_norvegicus
ENSLAFG00000003249	DDX42	100	96.043	ENSRBIG00000004781	DDX42	99	97.266	Rhinopithecus_bieti
ENSLAFG00000003249	DDX42	100	96.043	ENSRROG00000029794	DDX42	100	96.043	Rhinopithecus_roxellana
ENSLAFG00000003249	DDX42	100	96.471	ENSSBOG00000029624	DDX42	100	96.471	Saimiri_boliviensis_boliviensis
ENSLAFG00000003249	DDX42	100	92.169	ENSSHAG00000012896	-	100	91.111	Sarcophilus_harrisii
ENSLAFG00000003249	DDX42	71	61.367	ENSSHAG00000007919	-	99	60.624	Sarcophilus_harrisii
ENSLAFG00000003249	DDX42	81	81.997	ENSSFOG00015014064	ddx42	81	81.997	Scleropages_formosus
ENSLAFG00000003249	DDX42	100	71.413	ENSSMAG00000009077	ddx42	100	72.078	Scophthalmus_maximus
ENSLAFG00000003249	DDX42	99	72.689	ENSSDUG00000022221	ddx42	99	73.093	Seriola_dumerili
ENSLAFG00000003249	DDX42	99	72.347	ENSSLDG00000018483	ddx42	100	72.359	Seriola_lalandi_dorsalis
ENSLAFG00000003249	DDX42	100	96.039	ENSSARG00000009847	DDX42	100	96.039	Sorex_araneus
ENSLAFG00000003249	DDX42	100	84.447	ENSSPUG00000018806	DDX42	100	83.925	Sphenodon_punctatus
ENSLAFG00000003249	DDX42	91	76.519	ENSSPAG00000013055	ddx42	99	72.999	Stegastes_partitus
ENSLAFG00000003249	DDX42	86	94.665	ENSSSCG00000017289	DDX42	97	95.037	Sus_scrofa
ENSLAFG00000003249	DDX42	100	84.050	ENSTGUG00000001931	DDX42	100	84.249	Taeniopygia_guttata
ENSLAFG00000003249	DDX42	100	70.288	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSLAFG00000003249	DDX42	82	93.035	ENSTBEG00000010159	DDX42	100	93.298	Tupaia_belangeri
ENSLAFG00000003249	DDX42	100	96.688	ENSTTRG00000006962	DDX42	100	96.688	Tursiops_truncatus
ENSLAFG00000003249	DDX42	100	97.115	ENSUAMG00000007321	DDX42	100	97.115	Ursus_americanus
ENSLAFG00000003249	DDX42	100	96.368	ENSUMAG00000017438	DDX42	100	96.368	Ursus_maritimus
ENSLAFG00000003249	DDX42	100	87.273	ENSVPAG00000009633	DDX42	100	87.273	Vicugna_pacos
ENSLAFG00000003249	DDX42	100	97.326	ENSVVUG00000006095	DDX42	100	97.326	Vulpes_vulpes
ENSLAFG00000003249	DDX42	100	75.934	ENSXETG00000003245	ddx42	100	75.000	Xenopus_tropicalis
ENSLAFG00000003249	DDX42	85	71.572	ENSXCOG00000017560	ddx42	97	72.117	Xiphophorus_couchianus
ENSLAFG00000003249	DDX42	100	72.484	ENSXMAG00000008138	ddx42	100	73.019	Xiphophorus_maculatus