EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000003273 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 35190 bases
Position: chrscaffold_17:13986906-14022095
Accession: 100670715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000002720	KH_1	PF00013.29	1.8e-69	1	4
ENSLAFP00000002720	KH_1	PF00013.29	1.8e-69	2	4
ENSLAFP00000002720	KH_1	PF00013.29	1.8e-69	3	4
ENSLAFP00000002720	KH_1	PF00013.29	1.8e-69	4	4
ENSLAFP00000029312	KH_1	PF00013.29	1.6e-66	1	4
ENSLAFP00000029312	KH_1	PF00013.29	1.6e-66	2	4
ENSLAFP00000029312	KH_1	PF00013.29	1.6e-66	3	4
ENSLAFP00000029312	KH_1	PF00013.29	1.6e-66	4	4
ENSLAFP00000002720	KH_2	PF07650.17	1.9e-22	1	2
ENSLAFP00000002720	KH_2	PF07650.17	1.9e-22	2	2
ENSLAFP00000029312	KH_2	PF07650.17	8.5e-22	1	2
ENSLAFP00000029312	KH_2	PF07650.17	8.5e-22	2	2
ENSLAFP00000029312	DUF1897	PF09005.10	6.1e-12	1	2
ENSLAFP00000029312	DUF1897	PF09005.10	6.1e-12	2	2
ENSLAFP00000002720	DUF1897	PF09005.10	1.1e-11	1	2
ENSLAFP00000002720	DUF1897	PF09005.10	1.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000003273	FUBP1-201	2022	XM_023549449	ENSLAFP00000002720	674 (aa)	XP_023405217	G3SS24
ENSLAFT00000026699	FUBP1-202	1668	-	ENSLAFP00000029312	555 (aa)	-	G3UNA3

Gene Model

Click here to download ENSLAFG00000003273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000003273	FUBP1	57	30.726	ENSLAFG00000025917	NOVA2	55	36.765
ENSLAFG00000003273	FUBP1	59	36.364	ENSLAFG00000020835	PCBP3	68	36.364
ENSLAFG00000003273	FUBP1	97	55.904	ENSLAFG00000011611	FUBP3	84	61.731
ENSLAFG00000003273	FUBP1	97	62.568	ENSLAFG00000002426	KHSRP	70	64.350

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003273	FUBP1	100	98.018	ENSG00000162613	FUBP1	100	98.712	Homo_sapiens
ENSLAFG00000003273	FUBP1	99	72.662	ENSAPOG00000014845	fubp1	70	72.803	Acanthochromis_polyacanthus
ENSLAFG00000003273	FUBP1	100	98.198	ENSAMEG00000007372	FUBP1	99	99.249	Ailuropoda_melanoleuca
ENSLAFG00000003273	FUBP1	99	71.275	ENSACIG00000020024	fubp1	69	71.097	Amphilophus_citrinellus
ENSLAFG00000003273	FUBP1	99	68.806	ENSAPEG00000012232	fubp1	72	73.585	Amphiprion_percula
ENSLAFG00000003273	FUBP1	99	73.866	ENSATEG00000018619	fubp1	70	74.630	Anabas_testudineus
ENSLAFG00000003273	FUBP1	99	96.029	ENSAPLG00000005965	FUBP1	100	94.071	Anas_platyrhynchos
ENSLAFG00000003273	FUBP1	99	89.529	ENSACAG00000006310	FUBP1	96	90.469	Anolis_carolinensis
ENSLAFG00000003273	FUBP1	99	72.252	ENSACLG00000006708	fubp1	72	74.841	Astatotilapia_calliptera
ENSLAFG00000003273	FUBP1	98	76.471	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSLAFG00000003273	FUBP1	100	98.198	ENSCJAG00000007062	FUBP1	100	96.006	Callithrix_jacchus
ENSLAFG00000003273	FUBP1	100	98.198	ENSCAFG00000020361	FUBP1	99	99.100	Canis_familiaris
ENSLAFG00000003273	FUBP1	100	97.477	ENSTSYG00000000148	FUBP1	100	95.755	Carlito_syrichta
ENSLAFG00000003273	FUBP1	63	97.638	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSLAFG00000003273	FUBP1	99	97.834	ENSCPOG00000002757	FUBP1	100	97.987	Cavia_porcellus
ENSLAFG00000003273	FUBP1	100	79.292	ENSCCAG00000036537	FUBP1	100	79.564	Cebus_capucinus
ENSLAFG00000003273	FUBP1	100	98.018	ENSCATG00000042126	FUBP1	99	97.285	Cercocebus_atys
ENSLAFG00000003273	FUBP1	100	98.198	ENSCLAG00000005621	FUBP1	100	100.000	Chinchilla_lanigera
ENSLAFG00000003273	FUBP1	100	98.018	ENSCSAG00000001402	FUBP1	99	96.235	Chlorocebus_sabaeus
ENSLAFG00000003273	FUBP1	99	97.834	ENSCHOG00000008177	FUBP1	100	96.006	Choloepus_hoffmanni
ENSLAFG00000003273	FUBP1	100	98.378	ENSCGRG00001007103	Fubp1	100	95.569	Cricetulus_griseus_chok1gshd
ENSLAFG00000003273	FUBP1	100	98.378	ENSCGRG00000003372	Fubp1	98	100.000	Cricetulus_griseus_crigri
ENSLAFG00000003273	FUBP1	99	72.302	ENSCSEG00000021412	fubp1	70	73.263	Cynoglossus_semilaevis
ENSLAFG00000003273	FUBP1	99	73.036	ENSCVAG00000014487	fubp1	60	84.986	Cyprinodon_variegatus
ENSLAFG00000003273	FUBP1	100	70.506	ENSDARG00000029248	fubp1	70	73.760	Danio_rerio
ENSLAFG00000003273	FUBP1	84	73.077	ENSDNOG00000034565	-	68	73.750	Dasypus_novemcinctus
ENSLAFG00000003273	FUBP1	99	97.834	ENSDORG00000016534	Fubp1	100	95.858	Dipodomys_ordii
ENSLAFG00000003273	FUBP1	78	93.220	ENSETEG00000000948	-	62	93.220	Echinops_telfairi
ENSLAFG00000003273	FUBP1	79	47.559	ENSEBUG00000016143	fubp1	64	65.152	Eptatretus_burgeri
ENSLAFG00000003273	FUBP1	100	82.692	ENSEEUG00000001287	FUBP1	100	82.101	Erinaceus_europaeus
ENSLAFG00000003273	FUBP1	99	69.081	ENSELUG00000007990	fubp1	70	71.369	Esox_lucius
ENSLAFG00000003273	FUBP1	99	96.029	ENSFALG00000005768	FUBP1	83	96.029	Ficedula_albicollis
ENSLAFG00000003273	FUBP1	99	97.834	ENSFDAG00000014210	FUBP1	100	100.000	Fukomys_damarensis
ENSLAFG00000003273	FUBP1	99	72.679	ENSFHEG00000005230	fubp1	74	83.036	Fundulus_heteroclitus
ENSLAFG00000003273	FUBP1	99	67.742	ENSGMOG00000003370	fubp1	70	67.158	Gadus_morhua
ENSLAFG00000003273	FUBP1	100	95.871	ENSGALG00000008939	FUBP1	99	97.231	Gallus_gallus
ENSLAFG00000003273	FUBP1	99	72.679	ENSGAFG00000020972	fubp1	91	74.565	Gambusia_affinis
ENSLAFG00000003273	FUBP1	99	72.242	ENSGACG00000016563	fubp1	70	72.842	Gasterosteus_aculeatus
ENSLAFG00000003273	FUBP1	99	70.934	ENSHBUG00000009835	fubp1	85	73.996	Haplochromis_burtoni
ENSLAFG00000003273	FUBP1	100	84.865	ENSHGLG00000002808	-	72	86.792	Heterocephalus_glaber_female
ENSLAFG00000003273	FUBP1	100	98.018	ENSHGLG00000008415	-	100	100.000	Heterocephalus_glaber_female
ENSLAFG00000003273	FUBP1	100	85.586	ENSHGLG00100001414	-	72	87.421	Heterocephalus_glaber_male
ENSLAFG00000003273	FUBP1	100	98.018	ENSHGLG00100003417	-	100	95.582	Heterocephalus_glaber_male
ENSLAFG00000003273	FUBP1	99	70.745	ENSHCOG00000000910	fubp1	70	74.113	Hippocampus_comes
ENSLAFG00000003273	FUBP1	99	76.964	ENSIPUG00000009896	fubp1	70	74.370	Ictalurus_punctatus
ENSLAFG00000003273	FUBP1	100	98.198	ENSSTOG00000014312	FUBP1	100	95.876	Ictidomys_tridecemlineatus
ENSLAFG00000003273	FUBP1	100	97.297	ENSJJAG00000020069	Fubp1	100	100.000	Jaculus_jaculus
ENSLAFG00000003273	FUBP1	99	73.393	ENSKMAG00000018897	fubp1	69	73.418	Kryptolebias_marmoratus
ENSLAFG00000003273	FUBP1	99	68.376	ENSLBEG00000012700	fubp1	72	74.174	Labrus_bergylta
ENSLAFG00000003273	FUBP1	97	75.044	ENSLOCG00000003745	fubp1	92	74.949	Lepisosteus_oculatus
ENSLAFG00000003273	FUBP1	100	98.018	ENSMFAG00000031825	FUBP1	99	97.285	Macaca_fascicularis
ENSLAFG00000003273	FUBP1	100	98.018	ENSMMUG00000002899	FUBP1	99	99.397	Macaca_mulatta
ENSLAFG00000003273	FUBP1	100	98.018	ENSMNEG00000045212	FUBP1	99	97.285	Macaca_nemestrina
ENSLAFG00000003273	FUBP1	99	71.280	ENSMAMG00000007489	fubp1	61	54.601	Mastacembelus_armatus
ENSLAFG00000003273	FUBP1	99	73.788	ENSMZEG00005024298	fubp1	70	75.262	Maylandia_zebra
ENSLAFG00000003273	FUBP1	100	95.512	ENSMGAG00000009424	FUBP1	99	93.610	Meleagris_gallopavo
ENSLAFG00000003273	FUBP1	100	99.295	ENSMAUG00000016428	Fubp1	98	99.315	Mesocricetus_auratus
ENSLAFG00000003273	FUBP1	100	98.198	ENSMOCG00000014751	Fubp1	100	98.658	Microtus_ochrogaster
ENSLAFG00000003273	FUBP1	99	72.451	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSLAFG00000003273	FUBP1	99	89.005	ENSMODG00000020804	FUBP1	100	88.128	Monodelphis_domestica
ENSLAFG00000003273	FUBP1	99	71.326	ENSMALG00000015173	fubp1	70	73.795	Monopterus_albus
ENSLAFG00000003273	FUBP1	100	97.658	MGP_CAROLIEiJ_G0025740	Fubp1	98	100.000	Mus_caroli
ENSLAFG00000003273	FUBP1	100	97.297	ENSMUSG00000028034	Fubp1	100	97.735	Mus_musculus
ENSLAFG00000003273	FUBP1	100	98.018	MGP_PahariEiJ_G0027191	Fubp1	100	98.058	Mus_pahari
ENSLAFG00000003273	FUBP1	100	97.477	MGP_SPRETEiJ_G0026693	Fubp1	98	100.000	Mus_spretus
ENSLAFG00000003273	FUBP1	100	97.662	ENSMLUG00000014802	FUBP1	99	98.356	Myotis_lucifugus
ENSLAFG00000003273	FUBP1	100	98.198	ENSNGAG00000014302	Fubp1	98	100.000	Nannospalax_galili
ENSLAFG00000003273	FUBP1	99	69.078	ENSNBRG00000015099	fubp1	72	74.841	Neolamprologus_brichardi
ENSLAFG00000003273	FUBP1	100	95.135	ENSNLEG00000009772	FUBP1	99	95.489	Nomascus_leucogenys
ENSLAFG00000003273	FUBP1	99	88.558	ENSMEUG00000007917	-	79	90.068	Notamacropus_eugenii
ENSLAFG00000003273	FUBP1	91	97.945	ENSOPRG00000001175	FUBP1	91	97.945	Ochotona_princeps
ENSLAFG00000003273	FUBP1	99	98.014	ENSODEG00000002600	-	100	100.000	Octodon_degus
ENSLAFG00000003273	FUBP1	99	68.174	ENSODEG00000003657	-	99	64.599	Octodon_degus
ENSLAFG00000003273	FUBP1	99	70.833	ENSONIG00000018381	fubp1	69	75.262	Oreochromis_niloticus
ENSLAFG00000003273	FUBP1	100	91.823	ENSOANG00000009777	FUBP1	99	92.799	Ornithorhynchus_anatinus
ENSLAFG00000003273	FUBP1	99	68.545	ENSORLG00000003540	fubp1	71	74.630	Oryzias_latipes
ENSLAFG00000003273	FUBP1	99	69.363	ENSORLG00020005908	fubp1	70	73.996	Oryzias_latipes_hni
ENSLAFG00000003273	FUBP1	99	72.000	ENSORLG00015008779	fubp1	70	73.996	Oryzias_latipes_hsok
ENSLAFG00000003273	FUBP1	99	72.283	ENSOMEG00000021943	fubp1	70	72.939	Oryzias_melastigma
ENSLAFG00000003273	FUBP1	100	97.846	ENSOGAG00000014233	FUBP1	99	98.657	Otolemur_garnettii
ENSLAFG00000003273	FUBP1	100	98.018	ENSOARG00000013259	FUBP1	99	98.951	Ovis_aries
ENSLAFG00000003273	FUBP1	100	98.198	ENSPPRG00000000413	FUBP1	100	96.302	Panthera_pardus
ENSLAFG00000003273	FUBP1	100	98.198	ENSPTIG00000019450	FUBP1	100	96.302	Panthera_tigris_altaica
ENSLAFG00000003273	FUBP1	100	95.504	ENSPSIG00000012965	FUBP1	99	93.475	Pelodiscus_sinensis
ENSLAFG00000003273	FUBP1	99	73.153	ENSPMGG00000009060	fubp1	71	73.695	Periophthalmus_magnuspinnatus
ENSLAFG00000003273	FUBP1	99	98.014	ENSPEMG00000021802	Fubp1	100	99.315	Peromyscus_maniculatus_bairdii
ENSLAFG00000003273	FUBP1	52	67.974	ENSPMAG00000001644	-	90	58.436	Petromyzon_marinus
ENSLAFG00000003273	FUBP1	99	70.890	ENSPFOG00000000238	fubp1	62	52.353	Poecilia_formosa
ENSLAFG00000003273	FUBP1	99	70.036	ENSPLAG00000021170	fubp1	72	75.262	Poecilia_latipinna
ENSLAFG00000003273	FUBP1	99	74.819	ENSPMEG00000004747	fubp1	73	75.262	Poecilia_mexicana
ENSLAFG00000003273	FUBP1	98	73.993	ENSPREG00000017911	fubp1	63	84.457	Poecilia_reticulata
ENSLAFG00000003273	FUBP1	71	94.824	ENSPPYG00000001219	-	70	94.824	Pongo_abelii
ENSLAFG00000003273	FUBP1	99	98.014	ENSPCAG00000012617	FUBP1	100	96.296	Procavia_capensis
ENSLAFG00000003273	FUBP1	100	98.198	ENSPCOG00000024974	FUBP1	100	96.302	Propithecus_coquereli
ENSLAFG00000003273	FUBP1	100	92.012	ENSPVAG00000014637	FUBP1	100	91.124	Pteropus_vampyrus
ENSLAFG00000003273	FUBP1	99	72.352	ENSPNYG00000004552	fubp1	73	75.264	Pundamilia_nyererei
ENSLAFG00000003273	FUBP1	99	73.024	ENSPNAG00000016207	fubp1	87	74.167	Pygocentrus_nattereri
ENSLAFG00000003273	FUBP1	100	98.018	ENSRNOG00000043370	Fubp1	99	95.338	Rattus_norvegicus
ENSLAFG00000003273	FUBP1	100	98.018	ENSRBIG00000042950	FUBP1	99	97.309	Rhinopithecus_bieti
ENSLAFG00000003273	FUBP1	100	98.018	ENSRROG00000043534	FUBP1	99	97.309	Rhinopithecus_roxellana
ENSLAFG00000003273	FUBP1	100	98.198	ENSSBOG00000027299	FUBP1	98	99.622	Saimiri_boliviensis_boliviensis
ENSLAFG00000003273	FUBP1	100	97.297	ENSSHAG00000005367	FUBP1	99	98.732	Sarcophilus_harrisii
ENSLAFG00000003273	FUBP1	99	74.132	ENSSFOG00015010213	fubp1	70	76.000	Scleropages_formosus
ENSLAFG00000003273	FUBP1	99	66.555	ENSSMAG00000012029	fubp1	62	50.556	Scophthalmus_maximus
ENSLAFG00000003273	FUBP1	99	71.993	ENSSDUG00000007383	fubp1	68	75.681	Seriola_dumerili
ENSLAFG00000003273	FUBP1	99	72.093	ENSSLDG00000022863	fubp1	71	75.681	Seriola_lalandi_dorsalis
ENSLAFG00000003273	FUBP1	99	94.565	ENSSARG00000011730	FUBP1	57	100.000	Sorex_araneus
ENSLAFG00000003273	FUBP1	99	92.599	ENSSPUG00000008389	FUBP1	99	89.280	Sphenodon_punctatus
ENSLAFG00000003273	FUBP1	99	73.779	ENSSPAG00000010161	fubp1	69	74.630	Stegastes_partitus
ENSLAFG00000003273	FUBP1	65	97.260	ENSTGUG00000006841	FUBP1	69	92.744	Taeniopygia_guttata
ENSLAFG00000003273	FUBP1	96	72.420	ENSTRUG00000004615	fubp1	65	74.633	Takifugu_rubripes
ENSLAFG00000003273	FUBP1	59	82.667	ENSTNIG00000019815	-	88	84.459	Tetraodon_nigroviridis
ENSLAFG00000003273	FUBP1	86	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSLAFG00000003273	FUBP1	99	98.014	ENSTTRG00000000096	FUBP1	100	96.154	Tursiops_truncatus
ENSLAFG00000003273	FUBP1	99	98.014	ENSVPAG00000004709	FUBP1	100	96.125	Vicugna_pacos
ENSLAFG00000003273	FUBP1	99	70.939	ENSXCOG00000019354	fubp1	72	73.996	Xiphophorus_couchianus
ENSLAFG00000003273	FUBP1	98	74.074	ENSXMAG00000007168	fubp1	64	84.457	Xiphophorus_maculatus