EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000003787 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH2
Alias: CT110|FLJ10252|GPATC2|PPP1R30|Pfa1
Full Name: G-patch domain containing 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 177575 bases
Position: chrscaffold_74:5050447-5228021
Accession: 25499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003161	G-patch	PF01585.23	4.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000033856	GPATCH2-203	1179	-	ENSLAFP00000028214	393 (aa)	-	G3UK55
ENSLAFT00000032558	GPATCH2-202	1074	-	ENSLAFP00000026706	357 (aa)	-	G3UFU8
ENSLAFT00000003786	GPATCH2-201	1524	-	ENSLAFP00000003161	508 (aa)	-	G3ST27

Gene Model

Click here to download ENSLAFG00000003787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003787's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003787	GPATCH2	99	91.913	ENSG00000092978	GPATCH2	96	91.913	Homo_sapiens
ENSLAFG00000003787	GPATCH2	99	91.519	ENSAMEG00000000532	GPATCH2	96	91.519	Ailuropoda_melanoleuca
ENSLAFG00000003787	GPATCH2	97	49.533	ENSACIG00000017628	si:ch73-21k16.4	96	51.028	Amphilophus_citrinellus
ENSLAFG00000003787	GPATCH2	96	48.940	ENSAOCG00000020838	si:ch73-21k16.4	99	49.326	Amphiprion_ocellaris
ENSLAFG00000003787	GPATCH2	97	52.542	ENSAPEG00000007324	si:ch73-21k16.4	97	54.049	Amphiprion_percula
ENSLAFG00000003787	GPATCH2	97	47.992	ENSATEG00000003701	si:ch73-21k16.4	95	72.816	Anabas_testudineus
ENSLAFG00000003787	GPATCH2	97	78.049	ENSAPLG00000005559	GPATCH2	99	78.049	Anas_platyrhynchos
ENSLAFG00000003787	GPATCH2	97	75.000	ENSACAG00000014945	GPATCH2	91	75.000	Anolis_carolinensis
ENSLAFG00000003787	GPATCH2	99	91.124	ENSANAG00000032851	GPATCH2	98	91.124	Aotus_nancymaae
ENSLAFG00000003787	GPATCH2	97	53.497	ENSACLG00000008706	si:ch73-21k16.4	97	54.820	Astatotilapia_calliptera
ENSLAFG00000003787	GPATCH2	97	55.424	ENSAMXG00000001662	si:ch73-21k16.4	96	56.607	Astyanax_mexicanus
ENSLAFG00000003787	GPATCH2	99	91.142	ENSBTAG00000001574	GPATCH2	96	91.142	Bos_taurus
ENSLAFG00000003787	GPATCH2	99	91.913	ENSCJAG00000047537	GPATCH2	88	91.913	Callithrix_jacchus
ENSLAFG00000003787	GPATCH2	99	91.913	ENSCAFG00000010781	GPATCH2	96	91.913	Canis_familiaris
ENSLAFG00000003787	GPATCH2	99	90.945	ENSCHIG00000018042	GPATCH2	96	90.945	Capra_hircus
ENSLAFG00000003787	GPATCH2	99	86.982	ENSCAPG00000007843	GPATCH2	99	86.982	Cavia_aperea
ENSLAFG00000003787	GPATCH2	99	86.982	ENSCPOG00000003966	GPATCH2	96	86.982	Cavia_porcellus
ENSLAFG00000003787	GPATCH2	99	92.110	ENSCCAG00000010195	GPATCH2	96	92.110	Cebus_capucinus
ENSLAFG00000003787	GPATCH2	99	88.363	ENSCATG00000038238	GPATCH2	96	88.363	Cercocebus_atys
ENSLAFG00000003787	GPATCH2	99	87.968	ENSCLAG00000009274	GPATCH2	97	87.968	Chinchilla_lanigera
ENSLAFG00000003787	GPATCH2	97	78.659	ENSCPBG00000013037	GPATCH2	96	78.659	Chrysemys_picta_bellii
ENSLAFG00000003787	GPATCH2	99	91.519	ENSCANG00000031261	GPATCH2	96	91.519	Colobus_angolensis_palliatus
ENSLAFG00000003787	GPATCH2	100	86.614	ENSCGRG00001024577	Gpatch2	96	86.614	Cricetulus_griseus_chok1gshd
ENSLAFG00000003787	GPATCH2	100	86.614	ENSCGRG00000015039	Gpatch2	99	86.614	Cricetulus_griseus_crigri
ENSLAFG00000003787	GPATCH2	97	52.662	ENSCSEG00000002545	si:ch73-21k16.4	97	54.373	Cynoglossus_semilaevis
ENSLAFG00000003787	GPATCH2	97	52.841	ENSCVAG00000006306	si:ch73-21k16.4	97	54.356	Cyprinodon_variegatus
ENSLAFG00000003787	GPATCH2	97	54.491	ENSDARG00000101260	GPATCH2	96	55.689	Danio_rerio
ENSLAFG00000003787	GPATCH2	56	91.549	ENSDNOG00000000826	GPATCH2	99	91.549	Dasypus_novemcinctus
ENSLAFG00000003787	GPATCH2	99	90.927	ENSDORG00000030155	Gpatch2	99	90.927	Dipodomys_ordii
ENSLAFG00000003787	GPATCH2	100	87.008	ENSETEG00000012316	GPATCH2	96	87.008	Echinops_telfairi
ENSLAFG00000003787	GPATCH2	78	41.849	ENSEBUG00000014275	si:ch73-21k16.4	99	40.454	Eptatretus_burgeri
ENSLAFG00000003787	GPATCH2	99	91.716	ENSEASG00005003507	GPATCH2	96	91.716	Equus_asinus_asinus
ENSLAFG00000003787	GPATCH2	99	91.716	ENSECAG00000013263	GPATCH2	96	91.716	Equus_caballus
ENSLAFG00000003787	GPATCH2	99	82.617	ENSEEUG00000008748	GPATCH2	99	83.984	Erinaceus_europaeus
ENSLAFG00000003787	GPATCH2	97	57.060	ENSELUG00000004934	si:ch73-21k16.4	96	56.867	Esox_lucius
ENSLAFG00000003787	GPATCH2	99	92.110	ENSFCAG00000007129	GPATCH2	96	92.110	Felis_catus
ENSLAFG00000003787	GPATCH2	97	77.688	ENSFALG00000012223	GPATCH2	96	77.688	Ficedula_albicollis
ENSLAFG00000003787	GPATCH2	99	84.861	ENSFDAG00000011026	GPATCH2	99	84.861	Fukomys_damarensis
ENSLAFG00000003787	GPATCH2	81	55.556	ENSFHEG00000008699	si:ch73-21k16.4	85	61.905	Fundulus_heteroclitus
ENSLAFG00000003787	GPATCH2	81	56.140	ENSGMOG00000001595	si:ch73-21k16.4	79	61.538	Gadus_morhua
ENSLAFG00000003787	GPATCH2	97	77.846	ENSGALG00000009627	GPATCH2	96	77.846	Gallus_gallus
ENSLAFG00000003787	GPATCH2	97	53.107	ENSGAFG00000005041	si:ch73-21k16.4	97	54.237	Gambusia_affinis
ENSLAFG00000003787	GPATCH2	97	54.757	ENSGACG00000013427	si:ch73-21k16.4	97	55.922	Gasterosteus_aculeatus
ENSLAFG00000003787	GPATCH2	97	79.065	ENSGAGG00000013122	GPATCH2	96	79.065	Gopherus_agassizii
ENSLAFG00000003787	GPATCH2	99	91.913	ENSGGOG00000009440	GPATCH2	96	91.913	Gorilla_gorilla
ENSLAFG00000003787	GPATCH2	97	53.497	ENSHBUG00000014399	si:ch73-21k16.4	97	54.820	Haplochromis_burtoni
ENSLAFG00000003787	GPATCH2	99	88.757	ENSHGLG00000019513	GPATCH2	96	88.757	Heterocephalus_glaber_female
ENSLAFG00000003787	GPATCH2	99	88.757	ENSHGLG00100003689	GPATCH2	96	88.757	Heterocephalus_glaber_male
ENSLAFG00000003787	GPATCH2	97	51.889	ENSHCOG00000011331	si:ch73-21k16.4	96	52.087	Hippocampus_comes
ENSLAFG00000003787	GPATCH2	85	59.459	ENSIPUG00000012840	si:ch73-21k16.4	96	43.028	Ictalurus_punctatus
ENSLAFG00000003787	GPATCH2	99	92.308	ENSSTOG00000024959	GPATCH2	96	92.308	Ictidomys_tridecemlineatus
ENSLAFG00000003787	GPATCH2	100	84.932	ENSJJAG00000019244	Gpatch2	96	84.932	Jaculus_jaculus
ENSLAFG00000003787	GPATCH2	97	53.497	ENSLBEG00000008187	si:ch73-21k16.4	97	54.631	Labrus_bergylta
ENSLAFG00000003787	GPATCH2	97	74.593	ENSLACG00000013951	GPATCH2	96	74.593	Latimeria_chalumnae
ENSLAFG00000003787	GPATCH2	97	63.895	ENSLOCG00000016058	si:ch73-21k16.4	96	63.895	Lepisosteus_oculatus
ENSLAFG00000003787	GPATCH2	99	92.110	ENSMFAG00000000617	GPATCH2	96	92.110	Macaca_fascicularis
ENSLAFG00000003787	GPATCH2	99	92.110	ENSMMUG00000014946	GPATCH2	96	92.110	Macaca_mulatta
ENSLAFG00000003787	GPATCH2	99	92.110	ENSMNEG00000034969	GPATCH2	99	92.110	Macaca_nemestrina
ENSLAFG00000003787	GPATCH2	99	92.110	ENSMLEG00000032285	GPATCH2	96	92.110	Mandrillus_leucophaeus
ENSLAFG00000003787	GPATCH2	97	54.151	ENSMAMG00000015684	si:ch73-21k16.4	97	55.472	Mastacembelus_armatus
ENSLAFG00000003787	GPATCH2	97	53.497	ENSMZEG00005015040	si:ch73-21k16.4	97	54.820	Maylandia_zebra
ENSLAFG00000003787	GPATCH2	63	74.303	ENSMGAG00000009428	GPATCH2	99	74.303	Meleagris_gallopavo
ENSLAFG00000003787	GPATCH2	100	86.614	ENSMAUG00000004851	Gpatch2	96	86.614	Mesocricetus_auratus
ENSLAFG00000003787	GPATCH2	99	92.899	ENSMICG00000037090	GPATCH2	96	92.899	Microcebus_murinus
ENSLAFG00000003787	GPATCH2	100	87.008	ENSMOCG00000020821	Gpatch2	96	87.008	Microtus_ochrogaster
ENSLAFG00000003787	GPATCH2	97	53.922	ENSMMOG00000015329	si:ch73-21k16.4	96	55.490	Mola_mola
ENSLAFG00000003787	GPATCH2	97	83.333	ENSMODG00000004195	GPATCH2	90	83.333	Monodelphis_domestica
ENSLAFG00000003787	GPATCH2	97	51.040	ENSMALG00000016801	si:ch73-21k16.4	96	52.642	Monopterus_albus
ENSLAFG00000003787	GPATCH2	100	84.843	MGP_CAROLIEiJ_G0015030	Gpatch2	99	84.692	Mus_caroli
ENSLAFG00000003787	GPATCH2	100	84.843	ENSMUSG00000039210	Gpatch2	99	84.692	Mus_musculus
ENSLAFG00000003787	GPATCH2	100	85.433	MGP_PahariEiJ_G0028262	Gpatch2	99	85.288	Mus_pahari
ENSLAFG00000003787	GPATCH2	100	85.236	MGP_SPRETEiJ_G0015830	Gpatch2	99	85.089	Mus_spretus
ENSLAFG00000003787	GPATCH2	99	91.913	ENSMPUG00000004269	GPATCH2	96	91.913	Mustela_putorius_furo
ENSLAFG00000003787	GPATCH2	100	84.449	ENSNGAG00000002207	Gpatch2	96	84.449	Nannospalax_galili
ENSLAFG00000003787	GPATCH2	97	50.478	ENSNBRG00000020932	si:ch73-21k16.4	96	52.008	Neolamprologus_brichardi
ENSLAFG00000003787	GPATCH2	99	91.716	ENSNLEG00000014201	GPATCH2	98	91.600	Nomascus_leucogenys
ENSLAFG00000003787	GPATCH2	99	74.753	ENSMEUG00000012239	GPATCH2	99	74.753	Notamacropus_eugenii
ENSLAFG00000003787	GPATCH2	99	86.193	ENSOPRG00000010126	GPATCH2	96	86.193	Ochotona_princeps
ENSLAFG00000003787	GPATCH2	99	85.010	ENSODEG00000014927	GPATCH2	96	85.010	Octodon_degus
ENSLAFG00000003787	GPATCH2	97	55.212	ENSONIG00000000570	si:ch73-21k16.4	97	56.564	Oreochromis_niloticus
ENSLAFG00000003787	GPATCH2	99	75.093	ENSOANG00000008549	GPATCH2	99	75.093	Ornithorhynchus_anatinus
ENSLAFG00000003787	GPATCH2	99	90.730	ENSOCUG00000014512	GPATCH2	96	90.730	Oryctolagus_cuniculus
ENSLAFG00000003787	GPATCH2	97	52.552	ENSORLG00000016810	si:ch73-21k16.4	97	54.064	Oryzias_latipes
ENSLAFG00000003787	GPATCH2	97	52.841	ENSORLG00020003127	si:ch73-21k16.4	97	54.356	Oryzias_latipes_hni
ENSLAFG00000003787	GPATCH2	97	52.363	ENSORLG00015022304	si:ch73-21k16.4	97	53.875	Oryzias_latipes_hsok
ENSLAFG00000003787	GPATCH2	97	52.247	ENSOMEG00000017809	si:ch73-21k16.4	99	54.215	Oryzias_melastigma
ENSLAFG00000003787	GPATCH2	99	91.716	ENSOGAG00000004485	GPATCH2	96	91.716	Otolemur_garnettii
ENSLAFG00000003787	GPATCH2	99	90.945	ENSOARG00000011440	GPATCH2	96	90.945	Ovis_aries
ENSLAFG00000003787	GPATCH2	99	92.308	ENSPPAG00000038887	GPATCH2	96	92.308	Pan_paniscus
ENSLAFG00000003787	GPATCH2	99	92.308	ENSPPRG00000013363	GPATCH2	96	92.308	Panthera_pardus
ENSLAFG00000003787	GPATCH2	99	92.308	ENSPTRG00000001986	GPATCH2	96	92.308	Pan_troglodytes
ENSLAFG00000003787	GPATCH2	99	91.716	ENSPANG00000020943	GPATCH2	96	91.716	Papio_anubis
ENSLAFG00000003787	GPATCH2	97	60.282	ENSPKIG00000004245	si:ch73-21k16.4	96	60.081	Paramormyrops_kingsleyae
ENSLAFG00000003787	GPATCH2	97	79.065	ENSPSIG00000005373	GPATCH2	96	79.065	Pelodiscus_sinensis
ENSLAFG00000003787	GPATCH2	97	50.674	ENSPMGG00000000611	si:ch73-21k16.4	96	51.830	Periophthalmus_magnuspinnatus
ENSLAFG00000003787	GPATCH2	100	87.598	ENSPEMG00000018364	Gpatch2	98	87.598	Peromyscus_maniculatus_bairdii
ENSLAFG00000003787	GPATCH2	99	82.874	ENSPCIG00000027888	GPATCH2	96	82.874	Phascolarctos_cinereus
ENSLAFG00000003787	GPATCH2	97	52.652	ENSPFOG00000008062	si:ch73-21k16.4	97	53.962	Poecilia_formosa
ENSLAFG00000003787	GPATCH2	97	52.652	ENSPLAG00000022219	si:ch73-21k16.4	97	53.962	Poecilia_latipinna
ENSLAFG00000003787	GPATCH2	97	52.652	ENSPMEG00000010687	si:ch73-21k16.4	99	53.714	Poecilia_mexicana
ENSLAFG00000003787	GPATCH2	97	51.412	ENSPREG00000011915	si:ch73-21k16.4	95	53.107	Poecilia_reticulata
ENSLAFG00000003787	GPATCH2	99	85.996	ENSPPYG00000000216	GPATCH2	96	85.996	Pongo_abelii
ENSLAFG00000003787	GPATCH2	97	75.254	ENSPCAG00000013998	GPATCH2	100	75.254	Procavia_capensis
ENSLAFG00000003787	GPATCH2	99	87.695	ENSPVAG00000010649	GPATCH2	96	87.695	Pteropus_vampyrus
ENSLAFG00000003787	GPATCH2	97	53.497	ENSPNYG00000014144	si:ch73-21k16.4	97	54.820	Pundamilia_nyererei
ENSLAFG00000003787	GPATCH2	99	91.716	ENSRROG00000012833	GPATCH2	96	91.716	Rhinopithecus_roxellana
ENSLAFG00000003787	GPATCH2	99	91.519	ENSSBOG00000028891	GPATCH2	99	90.514	Saimiri_boliviensis_boliviensis
ENSLAFG00000003787	GPATCH2	96	76.386	ENSSHAG00000015123	GPATCH2	95	76.386	Sarcophilus_harrisii
ENSLAFG00000003787	GPATCH2	97	59.677	ENSSFOG00015000674	gpatch2	96	59.798	Scleropages_formosus
ENSLAFG00000003787	GPATCH2	97	53.700	ENSSMAG00000009585	si:ch73-21k16.4	97	55.028	Scophthalmus_maximus
ENSLAFG00000003787	GPATCH2	97	53.296	ENSSDUG00000011998	si:ch73-21k16.4	97	54.802	Seriola_dumerili
ENSLAFG00000003787	GPATCH2	97	53.484	ENSSLDG00000025385	si:ch73-21k16.4	97	54.991	Seriola_lalandi_dorsalis
ENSLAFG00000003787	GPATCH2	99	86.982	ENSSARG00000013063	GPATCH2	99	86.982	Sorex_araneus
ENSLAFG00000003787	GPATCH2	97	54.253	ENSSPAG00000023569	si:ch73-21k16.4	97	55.224	Stegastes_partitus
ENSLAFG00000003787	GPATCH2	99	89.961	ENSSSCG00000027207	GPATCH2	96	89.961	Sus_scrofa
ENSLAFG00000003787	GPATCH2	97	56.121	ENSTRUG00000015569	si:ch73-21k16.4	97	55.932	Takifugu_rubripes
ENSLAFG00000003787	GPATCH2	97	57.280	ENSTNIG00000016304	si:ch73-21k16.4	96	57.471	Tetraodon_nigroviridis
ENSLAFG00000003787	GPATCH2	62	100.000	ENSTBEG00000012337	-	62	100.000	Tupaia_belangeri
ENSLAFG00000003787	GPATCH2	82	100.000	ENSTTRG00000003739	GPATCH2	79	100.000	Tursiops_truncatus
ENSLAFG00000003787	GPATCH2	99	91.716	ENSUMAG00000020588	GPATCH2	99	91.633	Ursus_maritimus
ENSLAFG00000003787	GPATCH2	99	86.614	ENSVPAG00000005192	GPATCH2	96	86.614	Vicugna_pacos
ENSLAFG00000003787	GPATCH2	99	91.716	ENSVVUG00000012998	GPATCH2	96	91.716	Vulpes_vulpes
ENSLAFG00000003787	GPATCH2	99	72.530	ENSXETG00000021194	gpatch2	96	72.530	Xenopus_tropicalis
ENSLAFG00000003787	GPATCH2	97	50.958	ENSXCOG00000007145	si:ch73-21k16.4	96	52.490	Xiphophorus_couchianus
ENSLAFG00000003787	GPATCH2	97	52.150	ENSXMAG00000004679	si:ch73-21k16.4	97	53.259	Xiphophorus_maculatus