EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000003840 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 33988 bases
Position: chrscaffold_119:1737637-1771624
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003213	RRM_5	PF13893.6	1.2e-06	1	1
ENSLAFP00000003213	RRM_1	PF00076.22	1.8e-13	1	1
ENSLAFP00000003213	SAP	PF02037.27	7.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000003843	SAFB-201	2748	-	ENSLAFP00000003213	916 (aa)	-	G3ST64

Gene Model

Click here to download ENSLAFG00000003840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000003840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000003840	SAFB	99	72.737	ENSLAFG00000003836	SAFB2	98	72.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000003840	SAFB	100	89.336	ENSG00000160633	SAFB	99	90.533	Homo_sapiens
ENSLAFG00000003840	SAFB	89	46.636	ENSAPOG00000022508	safb	64	45.351	Acanthochromis_polyacanthus
ENSLAFG00000003840	SAFB	100	85.870	ENSAMEG00000012254	SAFB	99	89.359	Ailuropoda_melanoleuca
ENSLAFG00000003840	SAFB	97	40.944	ENSACIG00000006247	safb	99	41.620	Amphilophus_citrinellus
ENSLAFG00000003840	SAFB	93	44.395	ENSAOCG00000006308	safb	98	43.701	Amphiprion_ocellaris
ENSLAFG00000003840	SAFB	89	45.381	ENSAPEG00000023342	safb	64	43.922	Amphiprion_percula
ENSLAFG00000003840	SAFB	96	42.476	ENSATEG00000004998	safb	64	43.934	Anabas_testudineus
ENSLAFG00000003840	SAFB	90	63.658	ENSAPLG00000006355	-	99	63.895	Anas_platyrhynchos
ENSLAFG00000003840	SAFB	93	64.977	ENSAPLG00000005780	-	96	64.804	Anas_platyrhynchos
ENSLAFG00000003840	SAFB	100	89.119	ENSANAG00000028821	SAFB	99	90.316	Aotus_nancymaae
ENSLAFG00000003840	SAFB	96	42.952	ENSACLG00000001926	safb	95	43.415	Astatotilapia_calliptera
ENSLAFG00000003840	SAFB	93	44.114	ENSAMXG00000018154	safb	96	44.009	Astyanax_mexicanus
ENSLAFG00000003840	SAFB	98	87.403	ENSBTAG00000007875	SAFB	98	87.251	Bos_taurus
ENSLAFG00000003840	SAFB	84	94.366	ENSCJAG00000017081	SAFB	99	94.366	Callithrix_jacchus
ENSLAFG00000003840	SAFB	100	89.989	ENSCAFG00000018803	SAFB	86	91.186	Canis_familiaris
ENSLAFG00000003840	SAFB	100	89.989	ENSCAFG00020018943	SAFB	99	91.186	Canis_lupus_dingo
ENSLAFG00000003840	SAFB	98	85.967	ENSCHIG00000007262	SAFB	98	91.080	Capra_hircus
ENSLAFG00000003840	SAFB	58	75.330	ENSTSYG00000001851	-	98	68.934	Carlito_syrichta
ENSLAFG00000003840	SAFB	93	65.904	ENSCAPG00000012121	SAFB	77	82.167	Cavia_aperea
ENSLAFG00000003840	SAFB	100	83.689	ENSCPOG00000026322	SAFB	99	84.009	Cavia_porcellus
ENSLAFG00000003840	SAFB	100	89.227	ENSCCAG00000020193	SAFB	99	90.424	Cebus_capucinus
ENSLAFG00000003840	SAFB	100	89.663	ENSCATG00000029994	SAFB	99	90.860	Cercocebus_atys
ENSLAFG00000003840	SAFB	100	86.602	ENSCLAG00000007734	SAFB	99	86.924	Chinchilla_lanigera
ENSLAFG00000003840	SAFB	100	89.554	ENSCSAG00000009949	SAFB	99	90.751	Chlorocebus_sabaeus
ENSLAFG00000003840	SAFB	83	79.501	ENSCHOG00000003208	SAFB	89	81.176	Choloepus_hoffmanni
ENSLAFG00000003840	SAFB	91	60.978	ENSCPBG00000010936	-	98	62.116	Chrysemys_picta_bellii
ENSLAFG00000003840	SAFB	91	64.615	ENSCPBG00000010928	-	98	63.744	Chrysemys_picta_bellii
ENSLAFG00000003840	SAFB	100	84.331	ENSCANG00000019754	-	99	84.113	Colobus_angolensis_palliatus
ENSLAFG00000003840	SAFB	95	84.783	ENSCANG00000004774	-	99	91.710	Colobus_angolensis_palliatus
ENSLAFG00000003840	SAFB	100	80.662	ENSCGRG00001002254	Safb	99	81.731	Cricetulus_griseus_chok1gshd
ENSLAFG00000003840	SAFB	90	77.701	ENSCGRG00000011529	Safb	95	78.851	Cricetulus_griseus_crigri
ENSLAFG00000003840	SAFB	97	40.873	ENSCSEG00000019870	safb	98	40.251	Cynoglossus_semilaevis
ENSLAFG00000003840	SAFB	95	40.452	ENSCVAG00000002226	safb	94	40.378	Cyprinodon_variegatus
ENSLAFG00000003840	SAFB	90	43.387	ENSDARG00000020467	safb	99	42.392	Danio_rerio
ENSLAFG00000003840	SAFB	100	88.696	ENSDNOG00000015746	SAFB	95	89.925	Dasypus_novemcinctus
ENSLAFG00000003840	SAFB	100	81.886	ENSDORG00000016200	Safb	99	82.637	Dipodomys_ordii
ENSLAFG00000003840	SAFB	73	89.394	ENSETEG00000018679	SAFB	79	89.394	Echinops_telfairi
ENSLAFG00000003840	SAFB	100	85.173	ENSEASG00005023019	SAFB	99	86.039	Equus_asinus_asinus
ENSLAFG00000003840	SAFB	100	86.072	ENSECAG00000018659	SAFB	88	87.922	Equus_caballus
ENSLAFG00000003840	SAFB	95	43.062	ENSELUG00000022327	safb	66	44.663	Esox_lucius
ENSLAFG00000003840	SAFB	100	89.663	ENSFCAG00000011835	SAFB	99	90.751	Felis_catus
ENSLAFG00000003840	SAFB	87	60.048	ENSFALG00000013881	-	97	61.066	Ficedula_albicollis
ENSLAFG00000003840	SAFB	100	65.484	ENSFALG00000013882	-	91	63.832	Ficedula_albicollis
ENSLAFG00000003840	SAFB	100	69.173	ENSFDAG00000020306	SAFB	97	87.717	Fukomys_damarensis
ENSLAFG00000003840	SAFB	71	58.120	ENSFHEG00000004219	safb	94	40.111	Fundulus_heteroclitus
ENSLAFG00000003840	SAFB	58	47.764	ENSGMOG00000014280	safb	95	40.489	Gadus_morhua
ENSLAFG00000003840	SAFB	99	61.418	ENSGALG00000001948	-	97	62.778	Gallus_gallus
ENSLAFG00000003840	SAFB	100	64.547	ENSGALG00000013365	-	96	63.929	Gallus_gallus
ENSLAFG00000003840	SAFB	95	37.527	ENSGAFG00000016162	safb	95	38.486	Gambusia_affinis
ENSLAFG00000003840	SAFB	96	41.596	ENSGACG00000011385	safb	64	41.026	Gasterosteus_aculeatus
ENSLAFG00000003840	SAFB	96	62.581	ENSGAGG00000008424	-	100	63.118	Gopherus_agassizii
ENSLAFG00000003840	SAFB	72	58.519	ENSGAGG00000017702	-	97	58.157	Gopherus_agassizii
ENSLAFG00000003840	SAFB	100	89.119	ENSGGOG00000015109	SAFB	99	90.316	Gorilla_gorilla
ENSLAFG00000003840	SAFB	96	40.022	ENSHBUG00000009218	safb	94	40.904	Haplochromis_burtoni
ENSLAFG00000003840	SAFB	100	86.989	ENSHGLG00000015883	SAFB	99	88.065	Heterocephalus_glaber_female
ENSLAFG00000003840	SAFB	100	73.656	ENSHGLG00100004228	SAFB	77	87.786	Heterocephalus_glaber_male
ENSLAFG00000003840	SAFB	92	36.920	ENSHCOG00000001705	safb	97	38.985	Hippocampus_comes
ENSLAFG00000003840	SAFB	97	46.841	ENSIPUG00000024869	safb2	96	46.078	Ictalurus_punctatus
ENSLAFG00000003840	SAFB	93	86.721	ENSSTOG00000002783	SAFB	99	87.875	Ictidomys_tridecemlineatus
ENSLAFG00000003840	SAFB	100	82.196	ENSJJAG00000009021	Safb	99	83.369	Jaculus_jaculus
ENSLAFG00000003840	SAFB	90	44.560	ENSKMAG00000022308	safb	95	41.871	Kryptolebias_marmoratus
ENSLAFG00000003840	SAFB	96	42.473	ENSLBEG00000006015	safb	63	44.572	Labrus_bergylta
ENSLAFG00000003840	SAFB	64	51.702	ENSLACG00000018090	SAFB	96	52.516	Latimeria_chalumnae
ENSLAFG00000003840	SAFB	96	47.318	ENSLOCG00000003613	safb	99	46.041	Lepisosteus_oculatus
ENSLAFG00000003840	SAFB	100	89.663	ENSMFAG00000003885	SAFB	99	90.860	Macaca_fascicularis
ENSLAFG00000003840	SAFB	100	89.663	ENSMMUG00000017970	SAFB	99	90.860	Macaca_mulatta
ENSLAFG00000003840	SAFB	100	86.072	ENSMNEG00000035637	SAFB	99	87.269	Macaca_nemestrina
ENSLAFG00000003840	SAFB	100	84.113	ENSMLEG00000038637	SAFB	99	84.875	Mandrillus_leucophaeus
ENSLAFG00000003840	SAFB	96	42.457	ENSMAMG00000003357	safb	87	42.889	Mastacembelus_armatus
ENSLAFG00000003840	SAFB	96	43.062	ENSMZEG00005009120	safb	95	43.607	Maylandia_zebra
ENSLAFG00000003840	SAFB	90	58.831	ENSMGAG00000001051	-	100	60.501	Meleagris_gallopavo
ENSLAFG00000003840	SAFB	97	63.170	ENSMGAG00000001101	-	96	63.176	Meleagris_gallopavo
ENSLAFG00000003840	SAFB	53	84.265	ENSMAUG00000005013	Safb	98	86.335	Mesocricetus_auratus
ENSLAFG00000003840	SAFB	86	77.157	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSLAFG00000003840	SAFB	98	87.818	ENSMICG00000008739	-	99	87.132	Microcebus_murinus
ENSLAFG00000003840	SAFB	100	80.876	ENSMOCG00000014040	Safb	99	82.051	Microtus_ochrogaster
ENSLAFG00000003840	SAFB	100	73.830	ENSMODG00000001236	SAFB	99	73.617	Monodelphis_domestica
ENSLAFG00000003840	SAFB	94	41.757	ENSMALG00000020330	safb	98	42.140	Monopterus_albus
ENSLAFG00000003840	SAFB	100	80.790	MGP_CAROLIEiJ_G0021780	Safb	99	81.217	Mus_caroli
ENSLAFG00000003840	SAFB	100	80.896	ENSMUSG00000071054	Safb	99	81.750	Mus_musculus
ENSLAFG00000003840	SAFB	100	79.638	MGP_PahariEiJ_G0020769	Safb	99	81.557	Mus_pahari
ENSLAFG00000003840	SAFB	100	89.119	ENSMPUG00000006123	SAFB	93	90.968	Mustela_putorius_furo
ENSLAFG00000003840	SAFB	100	89.989	ENSMLUG00000001081	SAFB	99	89.880	Myotis_lucifugus
ENSLAFG00000003840	SAFB	100	78.998	ENSNGAG00000019882	Safb	99	80.171	Nannospalax_galili
ENSLAFG00000003840	SAFB	97	89.752	ENSNLEG00000013551	SAFB	100	90.991	Nomascus_leucogenys
ENSLAFG00000003840	SAFB	89	81.509	ENSOPRG00000011561	-	100	83.698	Ochotona_princeps
ENSLAFG00000003840	SAFB	100	86.817	ENSODEG00000014838	SAFB	99	87.245	Octodon_degus
ENSLAFG00000003840	SAFB	96	43.090	ENSONIG00000002318	safb	95	43.674	Oreochromis_niloticus
ENSLAFG00000003840	SAFB	90	79.422	ENSOCUG00000014628	SAFB	64	84.586	Oryctolagus_cuniculus
ENSLAFG00000003840	SAFB	89	43.677	ENSORLG00000016989	safb	98	41.630	Oryzias_latipes
ENSLAFG00000003840	SAFB	95	40.888	ENSORLG00020000404	safb	98	39.527	Oryzias_latipes_hni
ENSLAFG00000003840	SAFB	95	42.841	ENSORLG00015010733	safb	95	41.003	Oryzias_latipes_hsok
ENSLAFG00000003840	SAFB	96	40.713	ENSOMEG00000009066	safb	65	41.626	Oryzias_melastigma
ENSLAFG00000003840	SAFB	100	86.102	ENSOGAG00000027769	SAFB	99	85.993	Otolemur_garnettii
ENSLAFG00000003840	SAFB	98	83.960	ENSOARG00000007662	-	98	83.463	Ovis_aries
ENSLAFG00000003840	SAFB	79	80.221	ENSOARG00000007856	-	100	80.360	Ovis_aries
ENSLAFG00000003840	SAFB	100	89.227	ENSPPAG00000035129	SAFB	99	90.424	Pan_paniscus
ENSLAFG00000003840	SAFB	100	89.663	ENSPPRG00000017197	SAFB	99	90.751	Panthera_pardus
ENSLAFG00000003840	SAFB	100	89.227	ENSPTRG00000010335	SAFB	99	90.424	Pan_troglodytes
ENSLAFG00000003840	SAFB	100	89.119	ENSPANG00000007770	SAFB	99	90.751	Papio_anubis
ENSLAFG00000003840	SAFB	94	43.961	ENSPKIG00000009902	safb	95	43.931	Paramormyrops_kingsleyae
ENSLAFG00000003840	SAFB	99	62.196	ENSPSIG00000009367	-	97	60.734	Pelodiscus_sinensis
ENSLAFG00000003840	SAFB	100	61.164	ENSPSIG00000011679	-	99	63.492	Pelodiscus_sinensis
ENSLAFG00000003840	SAFB	100	81.156	ENSPEMG00000020428	Safb	99	82.227	Peromyscus_maniculatus_bairdii
ENSLAFG00000003840	SAFB	58	79.368	ENSPCIG00000009504	-	99	79.125	Phascolarctos_cinereus
ENSLAFG00000003840	SAFB	95	39.391	ENSPFOG00000007745	safb	99	41.647	Poecilia_formosa
ENSLAFG00000003840	SAFB	95	39.019	ENSPLAG00000001614	safb	95	39.978	Poecilia_latipinna
ENSLAFG00000003840	SAFB	95	39.391	ENSPMEG00000021023	safb	98	40.447	Poecilia_mexicana
ENSLAFG00000003840	SAFB	75	43.502	ENSPREG00000012496	safb	95	40.265	Poecilia_reticulata
ENSLAFG00000003840	SAFB	100	89.336	ENSPPYG00000009428	SAFB	99	90.533	Pongo_abelii
ENSLAFG00000003840	SAFB	100	92.266	ENSPCAG00000006475	SAFB	99	92.266	Procavia_capensis
ENSLAFG00000003840	SAFB	100	83.913	ENSPCOG00000014090	SAFB	99	83.370	Propithecus_coquereli
ENSLAFG00000003840	SAFB	100	83.351	ENSPVAG00000004913	SAFB	99	83.134	Pteropus_vampyrus
ENSLAFG00000003840	SAFB	95	44.284	ENSPNAG00000021838	safb	97	45.485	Pygocentrus_nattereri
ENSLAFG00000003840	SAFB	100	81.130	ENSRNOG00000050543	Safb	99	82.090	Rattus_norvegicus
ENSLAFG00000003840	SAFB	96	82.270	ENSRBIG00000042509	SAFB	88	95.699	Rhinopithecus_bieti
ENSLAFG00000003840	SAFB	100	89.663	ENSRROG00000029278	SAFB	99	90.860	Rhinopithecus_roxellana
ENSLAFG00000003840	SAFB	100	89.227	ENSSBOG00000026291	SAFB	99	90.424	Saimiri_boliviensis_boliviensis
ENSLAFG00000003840	SAFB	96	44.894	ENSSFOG00015008156	safb	95	45.113	Scleropages_formosus
ENSLAFG00000003840	SAFB	96	41.453	ENSSMAG00000009316	safb	98	41.631	Scophthalmus_maximus
ENSLAFG00000003840	SAFB	96	42.375	ENSSDUG00000009652	safb	94	43.018	Seriola_dumerili
ENSLAFG00000003840	SAFB	96	43.871	ENSSLDG00000001670	safb	95	42.424	Seriola_lalandi_dorsalis
ENSLAFG00000003840	SAFB	93	82.264	ENSSARG00000010475	SAFB	99	84.014	Sorex_araneus
ENSLAFG00000003840	SAFB	58	57.331	ENSSPUG00000009747	-	99	58.374	Sphenodon_punctatus
ENSLAFG00000003840	SAFB	73	51.852	ENSSPAG00000015682	safb	97	40.837	Stegastes_partitus
ENSLAFG00000003840	SAFB	100	88.280	ENSSSCG00000013522	SAFB	99	90.978	Sus_scrofa
ENSLAFG00000003840	SAFB	94	60.702	ENSTGUG00000000489	-	100	62.698	Taeniopygia_guttata
ENSLAFG00000003840	SAFB	97	64.405	ENSTGUG00000000502	-	100	63.737	Taeniopygia_guttata
ENSLAFG00000003840	SAFB	89	42.571	ENSTRUG00000003567	safb	98	42.286	Takifugu_rubripes
ENSLAFG00000003840	SAFB	89	43.556	ENSTNIG00000015470	safb	100	42.209	Tetraodon_nigroviridis
ENSLAFG00000003840	SAFB	74	79.851	ENSTBEG00000013124	-	66	85.075	Tupaia_belangeri
ENSLAFG00000003840	SAFB	92	96.825	ENSTTRG00000013588	SAFB	91	96.825	Tursiops_truncatus
ENSLAFG00000003840	SAFB	77	89.235	ENSUAMG00000024543	SAFB	89	89.093	Ursus_americanus
ENSLAFG00000003840	SAFB	88	88.636	ENSUMAG00000009734	SAFB	96	89.871	Ursus_maritimus
ENSLAFG00000003840	SAFB	74	92.308	ENSVPAG00000012043	SAFB	79	92.308	Vicugna_pacos
ENSLAFG00000003840	SAFB	100	90.207	ENSVVUG00000013720	SAFB	86	91.404	Vulpes_vulpes
ENSLAFG00000003840	SAFB	66	49.836	ENSXETG00000008755	safb	97	51.684	Xenopus_tropicalis
ENSLAFG00000003840	SAFB	96	38.738	ENSXMAG00000003458	safb	94	39.648	Xiphophorus_maculatus