EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000004209 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 75986 bases
Position: chrscaffold_65:6853994-6929979
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003512	Ago_hook	PF10427.9	1.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000004211	TNRC6A-201	5553	-	ENSLAFP00000003512	1851 (aa)	-	G3STU5

Gene Model

Click here to download ENSLAFG00000004209's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000004209	TNRC6A	100	39.990	ENSLAFG00000011122	TNRC6C	99	43.675
ENSLAFG00000004209	TNRC6A	72	39.674	ENSLAFG00000014473	TNRC6B	97	42.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004209	TNRC6A	99	94.641	ENSG00000090905	TNRC6A	100	94.375	Homo_sapiens
ENSLAFG00000004209	TNRC6A	100	92.368	ENSAMEG00000009333	TNRC6A	100	92.263	Ailuropoda_melanoleuca
ENSLAFG00000004209	TNRC6A	99	79.853	ENSAPLG00000009978	TNRC6A	100	79.276	Anas_platyrhynchos
ENSLAFG00000004209	TNRC6A	99	52.395	ENSACAG00000011857	TNRC6A	94	54.948	Anolis_carolinensis
ENSLAFG00000004209	TNRC6A	99	94.412	ENSANAG00000025252	TNRC6A	98	94.468	Aotus_nancymaae
ENSLAFG00000004209	TNRC6A	93	57.350	ENSAMXG00000019919	tnrc6a	100	57.523	Astyanax_mexicanus
ENSLAFG00000004209	TNRC6A	99	94.450	ENSBTAG00000017999	TNRC6A	99	94.060	Bos_taurus
ENSLAFG00000004209	TNRC6A	99	93.693	ENSCJAG00000020677	TNRC6A	96	93.747	Callithrix_jacchus
ENSLAFG00000004209	TNRC6A	99	94.683	ENSCAFG00000017531	TNRC6A	99	94.525	Canis_familiaris
ENSLAFG00000004209	TNRC6A	99	93.488	ENSCAFG00020021160	TNRC6A	99	93.337	Canis_lupus_dingo
ENSLAFG00000004209	TNRC6A	100	93.646	ENSCHIG00000019448	TNRC6A	99	93.538	Capra_hircus
ENSLAFG00000004209	TNRC6A	99	94.683	ENSTSYG00000012711	TNRC6A	98	94.632	Carlito_syrichta
ENSLAFG00000004209	TNRC6A	99	94.654	ENSCPOG00000036684	TNRC6A	98	94.603	Cavia_porcellus
ENSLAFG00000004209	TNRC6A	99	94.471	ENSCCAG00000033664	TNRC6A	98	94.474	Cebus_capucinus
ENSLAFG00000004209	TNRC6A	99	94.341	ENSCATG00000019284	TNRC6A	99	93.251	Cercocebus_atys
ENSLAFG00000004209	TNRC6A	99	89.420	ENSCLAG00000010217	TNRC6A	98	89.640	Chinchilla_lanigera
ENSLAFG00000004209	TNRC6A	99	92.211	ENSCSAG00000006561	TNRC6A	98	92.111	Chlorocebus_sabaeus
ENSLAFG00000004209	TNRC6A	95	90.448	ENSCHOG00000009374	TNRC6A	92	90.149	Choloepus_hoffmanni
ENSLAFG00000004209	TNRC6A	93	81.766	ENSCPBG00000001881	TNRC6A	99	81.593	Chrysemys_picta_bellii
ENSLAFG00000004209	TNRC6A	99	94.791	ENSCANG00000041549	TNRC6A	98	94.686	Colobus_angolensis_palliatus
ENSLAFG00000004209	TNRC6A	99	93.484	ENSCGRG00001015021	Tnrc6a	98	93.595	Cricetulus_griseus_chok1gshd
ENSLAFG00000004209	TNRC6A	99	92.822	ENSCGRG00000013351	Tnrc6a	97	92.876	Cricetulus_griseus_crigri
ENSLAFG00000004209	TNRC6A	93	56.726	ENSDARG00000079688	tnrc6a	99	57.039	Danio_rerio
ENSLAFG00000004209	TNRC6A	99	91.229	ENSDNOG00000013989	TNRC6A	99	91.076	Dasypus_novemcinctus
ENSLAFG00000004209	TNRC6A	99	84.979	ENSETEG00000014658	TNRC6A	99	84.934	Echinops_telfairi
ENSLAFG00000004209	TNRC6A	99	95.523	ENSEASG00005017693	TNRC6A	98	95.526	Equus_asinus_asinus
ENSLAFG00000004209	TNRC6A	99	95.523	ENSECAG00000025056	TNRC6A	99	95.526	Equus_caballus
ENSLAFG00000004209	TNRC6A	99	85.535	ENSEEUG00000004530	TNRC6A	99	85.491	Erinaceus_europaeus
ENSLAFG00000004209	TNRC6A	99	94.026	ENSFCAG00000025236	TNRC6A	98	93.975	Felis_catus
ENSLAFG00000004209	TNRC6A	99	77.518	ENSFALG00000003757	TNRC6A	97	77.374	Ficedula_albicollis
ENSLAFG00000004209	TNRC6A	93	82.316	ENSGALG00000006068	TNRC6A	99	82.604	Gallus_gallus
ENSLAFG00000004209	TNRC6A	93	81.092	ENSGAGG00000023209	TNRC6A	99	81.207	Gopherus_agassizii
ENSLAFG00000004209	TNRC6A	99	94.373	ENSGGOG00000005137	TNRC6A	98	94.322	Gorilla_gorilla
ENSLAFG00000004209	TNRC6A	99	92.749	ENSHGLG00000012474	-	97	92.803	Heterocephalus_glaber_female
ENSLAFG00000004209	TNRC6A	97	73.620	ENSHGLG00000007368	-	93	73.236	Heterocephalus_glaber_female
ENSLAFG00000004209	TNRC6A	99	92.760	ENSHGLG00100012496	-	97	92.597	Heterocephalus_glaber_male
ENSLAFG00000004209	TNRC6A	99	91.293	ENSSTOG00000023394	TNRC6A	96	91.141	Ictidomys_tridecemlineatus
ENSLAFG00000004209	TNRC6A	99	67.757	ENSLACG00000006277	TNRC6A	100	68.224	Latimeria_chalumnae
ENSLAFG00000004209	TNRC6A	100	83.002	ENSLOCG00000005517	tnrc6a	90	83.002	Lepisosteus_oculatus
ENSLAFG00000004209	TNRC6A	99	89.085	ENSMFAG00000003824	TNRC6A	99	91.227	Macaca_fascicularis
ENSLAFG00000004209	TNRC6A	99	94.683	ENSMMUG00000020428	TNRC6A	98	94.579	Macaca_mulatta
ENSLAFG00000004209	TNRC6A	99	94.231	ENSMNEG00000034854	TNRC6A	98	94.287	Macaca_nemestrina
ENSLAFG00000004209	TNRC6A	99	88.854	ENSMLEG00000042737	TNRC6A	97	90.990	Mandrillus_leucophaeus
ENSLAFG00000004209	TNRC6A	99	77.461	ENSMGAG00000006455	TNRC6A	93	79.579	Meleagris_gallopavo
ENSLAFG00000004209	TNRC6A	99	93.794	ENSMAUG00000012750	Tnrc6a	98	93.959	Mesocricetus_auratus
ENSLAFG00000004209	TNRC6A	100	95.608	ENSMICG00000030685	TNRC6A	98	95.608	Microcebus_murinus
ENSLAFG00000004209	TNRC6A	99	93.521	ENSMOCG00000000152	Tnrc6a	98	93.470	Microtus_ochrogaster
ENSLAFG00000004209	TNRC6A	99	79.918	ENSMODG00000016348	TNRC6A	96	79.928	Monodelphis_domestica
ENSLAFG00000004209	TNRC6A	99	92.166	MGP_CAROLIEiJ_G0030425	Tnrc6a	98	92.063	Mus_caroli
ENSLAFG00000004209	TNRC6A	99	92.549	ENSMUSG00000052707	Tnrc6a	98	92.499	Mus_musculus
ENSLAFG00000004209	TNRC6A	99	92.822	MGP_PahariEiJ_G0013635	Tnrc6a	98	92.772	Mus_pahari
ENSLAFG00000004209	TNRC6A	99	90.474	MGP_SPRETEiJ_G0031539	Tnrc6a	100	90.143	Mus_spretus
ENSLAFG00000004209	TNRC6A	99	84.154	ENSMPUG00000012324	TNRC6A	100	83.613	Mustela_putorius_furo
ENSLAFG00000004209	TNRC6A	99	90.295	ENSMLUG00000002701	TNRC6A	100	89.926	Myotis_lucifugus
ENSLAFG00000004209	TNRC6A	99	94.235	ENSNGAG00000020702	Tnrc6a	98	94.346	Nannospalax_galili
ENSLAFG00000004209	TNRC6A	99	92.938	ENSNLEG00000011851	TNRC6A	98	92.623	Nomascus_leucogenys
ENSLAFG00000004209	TNRC6A	76	83.518	ENSMEUG00000015959	-	74	83.186	Notamacropus_eugenii
ENSLAFG00000004209	TNRC6A	95	99.254	ENSOPRG00000005819	TNRC6A	93	99.254	Ochotona_princeps
ENSLAFG00000004209	TNRC6A	99	89.257	ENSODEG00000012802	TNRC6A	98	88.625	Octodon_degus
ENSLAFG00000004209	TNRC6A	90	80.023	ENSOANG00000007672	TNRC6A	100	79.849	Ornithorhynchus_anatinus
ENSLAFG00000004209	TNRC6A	99	89.499	ENSOCUG00000004325	TNRC6A	100	89.340	Oryctolagus_cuniculus
ENSLAFG00000004209	TNRC6A	99	92.606	ENSOGAG00000006666	TNRC6A	98	92.505	Otolemur_garnettii
ENSLAFG00000004209	TNRC6A	99	90.748	ENSOARG00000017950	TNRC6A	98	94.817	Ovis_aries
ENSLAFG00000004209	TNRC6A	99	94.281	ENSPPAG00000028379	TNRC6A	98	94.177	Pan_paniscus
ENSLAFG00000004209	TNRC6A	99	94.026	ENSPPRG00000005861	TNRC6A	98	93.975	Panthera_pardus
ENSLAFG00000004209	TNRC6A	99	92.712	ENSPTIG00000006346	TNRC6A	98	92.662	Panthera_tigris_altaica
ENSLAFG00000004209	TNRC6A	99	91.567	ENSPTRG00000007898	TNRC6A	99	91.411	Pan_troglodytes
ENSLAFG00000004209	TNRC6A	99	92.242	ENSPANG00000018523	TNRC6A	97	91.979	Papio_anubis
ENSLAFG00000004209	TNRC6A	89	79.310	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSLAFG00000004209	TNRC6A	79	77.245	ENSPSIG00000003965	TNRC6A	100	77.043	Pelodiscus_sinensis
ENSLAFG00000004209	TNRC6A	99	93.420	ENSPEMG00000016318	Tnrc6a	98	93.423	Peromyscus_maniculatus_bairdii
ENSLAFG00000004209	TNRC6A	99	82.762	ENSPCIG00000012106	TNRC6A	100	82.869	Phascolarctos_cinereus
ENSLAFG00000004209	TNRC6A	99	91.497	ENSPPYG00000007202	TNRC6A	98	91.345	Pongo_abelii
ENSLAFG00000004209	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	92	100.000	Procavia_capensis
ENSLAFG00000004209	TNRC6A	99	92.922	ENSPCOG00000010134	TNRC6A	97	92.765	Propithecus_coquereli
ENSLAFG00000004209	TNRC6A	89	67.336	ENSPVAG00000012066	TNRC6A	97	68.872	Pteropus_vampyrus
ENSLAFG00000004209	TNRC6A	99	92.086	ENSRNOG00000024737	Tnrc6a	98	92.197	Rattus_norvegicus
ENSLAFG00000004209	TNRC6A	99	94.844	ENSRBIG00000014222	TNRC6A	99	94.740	Rhinopithecus_bieti
ENSLAFG00000004209	TNRC6A	99	92.659	ENSRROG00000032360	TNRC6A	98	92.505	Rhinopithecus_roxellana
ENSLAFG00000004209	TNRC6A	100	92.004	ENSSBOG00000036197	TNRC6A	100	92.632	Saimiri_boliviensis_boliviensis
ENSLAFG00000004209	TNRC6A	93	83.542	ENSSHAG00000008811	TNRC6A	99	83.827	Sarcophilus_harrisii
ENSLAFG00000004209	TNRC6A	93	58.223	ENSSFOG00015008920	tnrc6a	100	57.552	Scleropages_formosus
ENSLAFG00000004209	TNRC6A	73	76.686	ENSSARG00000002479	TNRC6A	89	77.187	Sorex_araneus
ENSLAFG00000004209	TNRC6A	93	78.251	ENSSPUG00000010525	TNRC6A	100	78.423	Sphenodon_punctatus
ENSLAFG00000004209	TNRC6A	99	94.486	ENSSSCG00000038870	TNRC6A	100	96.687	Sus_scrofa
ENSLAFG00000004209	TNRC6A	99	80.635	ENSTGUG00000006142	TNRC6A	97	80.204	Taeniopygia_guttata
ENSLAFG00000004209	TNRC6A	100	89.713	ENSTBEG00000014965	TNRC6A	100	89.608	Tupaia_belangeri
ENSLAFG00000004209	TNRC6A	93	92.344	ENSTTRG00000002008	TNRC6A	90	92.344	Tursiops_truncatus
ENSLAFG00000004209	TNRC6A	81	94.645	ENSUAMG00000006656	-	93	94.511	Ursus_americanus
ENSLAFG00000004209	TNRC6A	99	92.555	ENSUMAG00000008274	TNRC6A	100	96.386	Ursus_maritimus
ENSLAFG00000004209	TNRC6A	55	84.071	ENSVPAG00000010764	-	55	83.735	Vicugna_pacos
ENSLAFG00000004209	TNRC6A	95	100.000	ENSVVUG00000005380	TNRC6A	97	94.418	Vulpes_vulpes
ENSLAFG00000004209	TNRC6A	97	64.109	ENSXETG00000030437	TNRC6A	99	64.136	Xenopus_tropicalis