EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000004339 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1L
Alias: C1orf25
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 44007 bases
Position: chrscaffold_16:14997570-15041576
Accession: 16782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018543	TRM	PF02005.16	2.4e-66	1	2
ENSLAFP00000018543	TRM	PF02005.16	2.4e-66	2	2
ENSLAFP00000003618	TRM	PF02005.16	2.4e-66	1	2
ENSLAFP00000003618	TRM	PF02005.16	2.4e-66	2	2
ENSLAFP00000027074	TRM	PF02005.16	2.4e-66	1	2
ENSLAFP00000027074	TRM	PF02005.16	2.4e-66	2	2
ENSLAFP00000018950	TRM	PF02005.16	2.7e-66	1	2
ENSLAFP00000018950	TRM	PF02005.16	2.7e-66	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000036126	TRMT1L-201	2211	-	ENSLAFP00000018950	736 (aa)	-	G3TTP2
ENSLAFT00000004340	TRMT1L-202	2190	-	ENSLAFP00000003618	729 (aa)	-	G3SU29
ENSLAFT00000031400	TRMT1L-204	2193	-	ENSLAFP00000027074	731 (aa)	-	G3UGW6
ENSLAFT00000025287	TRMT1L-203	2190	-	ENSLAFP00000018543	729 (aa)	-	G3TSI5

Gene Model

Click here to download ENSLAFG00000004339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004339	TRMT1L	100	91.678	ENSG00000121486	TRMT1L	99	98.571	Homo_sapiens
ENSLAFG00000004339	TRMT1L	86	61.538	ENSAPOG00000011807	trmt1l	98	58.147	Acanthochromis_polyacanthus
ENSLAFG00000004339	TRMT1L	100	91.156	ENSAMEG00000013538	TRMT1L	100	91.565	Ailuropoda_melanoleuca
ENSLAFG00000004339	TRMT1L	68	62.926	ENSACIG00000012049	trmt1l	96	62.926	Amphilophus_citrinellus
ENSLAFG00000004339	TRMT1L	85	62.742	ENSAOCG00000018112	trmt1l	97	62.440	Amphiprion_ocellaris
ENSLAFG00000004339	TRMT1L	86	61.478	ENSAPEG00000021433	trmt1l	97	61.392	Amphiprion_percula
ENSLAFG00000004339	TRMT1L	87	61.765	ENSATEG00000004573	trmt1l	99	63.785	Anabas_testudineus
ENSLAFG00000004339	TRMT1L	96	70.228	ENSAPLG00000008394	TRMT1L	98	70.201	Anas_platyrhynchos
ENSLAFG00000004339	TRMT1L	88	73.364	ENSACAG00000002342	TRMT1L	87	73.502	Anolis_carolinensis
ENSLAFG00000004339	TRMT1L	100	91.951	ENSANAG00000038162	TRMT1L	100	91.269	Aotus_nancymaae
ENSLAFG00000004339	TRMT1L	88	61.256	ENSACLG00000021625	trmt1l	93	61.256	Astatotilapia_calliptera
ENSLAFG00000004339	TRMT1L	87	62.344	ENSAMXG00000009602	trmt1l	89	62.835	Astyanax_mexicanus
ENSLAFG00000004339	TRMT1L	100	88.664	ENSBTAG00000011285	TRMT1L	100	89.581	Bos_taurus
ENSLAFG00000004339	TRMT1L	100	90.834	ENSCJAG00000005456	TRMT1L	100	89.849	Callithrix_jacchus
ENSLAFG00000004339	TRMT1L	99	91.599	ENSCAFG00000013518	TRMT1L	98	91.962	Canis_familiaris
ENSLAFG00000004339	TRMT1L	100	91.610	ENSCAFG00020015640	TRMT1L	100	91.973	Canis_lupus_dingo
ENSLAFG00000004339	TRMT1L	100	89.069	ENSCHIG00000016522	TRMT1L	100	90.122	Capra_hircus
ENSLAFG00000004339	TRMT1L	100	90.123	ENSTSYG00000010465	TRMT1L	100	89.026	Carlito_syrichta
ENSLAFG00000004339	TRMT1L	72	89.130	ENSCAPG00000012562	TRMT1L	88	88.406	Cavia_aperea
ENSLAFG00000004339	TRMT1L	100	88.477	ENSCPOG00000001567	TRMT1L	100	87.929	Cavia_porcellus
ENSLAFG00000004339	TRMT1L	100	91.678	ENSCCAG00000018699	TRMT1L	100	90.996	Cebus_capucinus
ENSLAFG00000004339	TRMT1L	97	92.525	ENSCATG00000043114	TRMT1L	100	91.293	Cercocebus_atys
ENSLAFG00000004339	TRMT1L	100	90.123	ENSCLAG00000010801	-	100	89.712	Chinchilla_lanigera
ENSLAFG00000004339	TRMT1L	98	73.136	ENSCLAG00000010853	-	98	71.763	Chinchilla_lanigera
ENSLAFG00000004339	TRMT1L	97	92.525	ENSCSAG00000012880	TRMT1L	100	91.293	Chlorocebus_sabaeus
ENSLAFG00000004339	TRMT1L	74	78.750	ENSCHOG00000011164	TRMT1L	89	78.750	Choloepus_hoffmanni
ENSLAFG00000004339	TRMT1L	90	77.169	ENSCPBG00000015694	TRMT1L	94	76.391	Chrysemys_picta_bellii
ENSLAFG00000004339	TRMT1L	97	91.961	ENSCANG00000031107	TRMT1L	100	90.748	Colobus_angolensis_palliatus
ENSLAFG00000004339	TRMT1L	100	86.494	ENSCGRG00001019297	Trmt1l	100	85.929	Cricetulus_griseus_chok1gshd
ENSLAFG00000004339	TRMT1L	100	86.494	ENSCGRG00000005036	Trmt1l	100	85.929	Cricetulus_griseus_crigri
ENSLAFG00000004339	TRMT1L	89	60.643	ENSCSEG00000001248	trmt1l	98	60.091	Cynoglossus_semilaevis
ENSLAFG00000004339	TRMT1L	89	60.363	ENSCVAG00000012274	trmt1l	97	59.604	Cyprinodon_variegatus
ENSLAFG00000004339	TRMT1L	87	60.836	ENSDARG00000042057	trmt1l	94	62.890	Danio_rerio
ENSLAFG00000004339	TRMT1L	100	90.612	ENSDNOG00000005239	TRMT1L	100	90.204	Dasypus_novemcinctus
ENSLAFG00000004339	TRMT1L	98	78.711	ENSDORG00000003298	Trmt1l	100	78.711	Dipodomys_ordii
ENSLAFG00000004339	TRMT1L	82	81.839	ENSETEG00000015895	TRMT1L	91	81.839	Echinops_telfairi
ENSLAFG00000004339	TRMT1L	86	48.248	ENSEBUG00000010301	trmt1l	95	48.248	Eptatretus_burgeri
ENSLAFG00000004339	TRMT1L	100	87.332	ENSEASG00005005551	TRMT1L	100	87.466	Equus_asinus_asinus
ENSLAFG00000004339	TRMT1L	99	91.486	ENSECAG00000020999	TRMT1L	95	91.622	Equus_caballus
ENSLAFG00000004339	TRMT1L	99	75.516	ENSEEUG00000014110	TRMT1L	100	74.415	Erinaceus_europaeus
ENSLAFG00000004339	TRMT1L	92	60.058	ENSELUG00000020587	trmt1l	90	62.733	Esox_lucius
ENSLAFG00000004339	TRMT1L	100	92.867	ENSFCAG00000011285	TRMT1L	100	91.221	Felis_catus
ENSLAFG00000004339	TRMT1L	90	71.865	ENSFALG00000003177	TRMT1L	100	71.865	Ficedula_albicollis
ENSLAFG00000004339	TRMT1L	100	90.548	ENSFDAG00000008822	TRMT1L	100	88.493	Fukomys_damarensis
ENSLAFG00000004339	TRMT1L	73	63.469	ENSFHEG00000014328	trmt1l	99	63.469	Fundulus_heteroclitus
ENSLAFG00000004339	TRMT1L	85	62.279	ENSGMOG00000009535	trmt1l	98	61.859	Gadus_morhua
ENSLAFG00000004339	TRMT1L	90	71.822	ENSGALG00000033077	TRMT1L	87	71.041	Gallus_gallus
ENSLAFG00000004339	TRMT1L	91	59.232	ENSGAFG00000012445	trmt1l	93	59.847	Gambusia_affinis
ENSLAFG00000004339	TRMT1L	85	62.381	ENSGACG00000005050	trmt1l	97	63.321	Gasterosteus_aculeatus
ENSLAFG00000004339	TRMT1L	90	76.606	ENSGAGG00000007441	TRMT1L	86	76.417	Gopherus_agassizii
ENSLAFG00000004339	TRMT1L	100	91.405	ENSGGOG00000011778	TRMT1L	100	91.405	Gorilla_gorilla
ENSLAFG00000004339	TRMT1L	88	60.829	ENSHBUG00000000622	trmt1l	98	62.500	Haplochromis_burtoni
ENSLAFG00000004339	TRMT1L	100	84.911	ENSHGLG00000003135	-	100	85.460	Heterocephalus_glaber_female
ENSLAFG00000004339	TRMT1L	100	76.526	ENSHGLG00000012595	-	99	76.391	Heterocephalus_glaber_female
ENSLAFG00000004339	TRMT1L	100	89.438	ENSHGLG00100019412	-	100	90.535	Heterocephalus_glaber_male
ENSLAFG00000004339	TRMT1L	100	76.526	ENSHGLG00100004569	-	99	76.391	Heterocephalus_glaber_male
ENSLAFG00000004339	TRMT1L	86	61.783	ENSIPUG00000008873	trmt1l	97	61.146	Ictalurus_punctatus
ENSLAFG00000004339	TRMT1L	100	92.066	ENSSTOG00000010332	TRMT1L	100	91.382	Ictidomys_tridecemlineatus
ENSLAFG00000004339	TRMT1L	100	84.774	ENSJJAG00000010929	Trmt1l	100	83.584	Jaculus_jaculus
ENSLAFG00000004339	TRMT1L	87	61.006	ENSKMAG00000010310	trmt1l	92	61.478	Kryptolebias_marmoratus
ENSLAFG00000004339	TRMT1L	84	59.098	ENSLBEG00000007982	-	92	60.745	Labrus_bergylta
ENSLAFG00000004339	TRMT1L	90	60.060	ENSLBEG00000003487	trmt1l	91	61.635	Labrus_bergylta
ENSLAFG00000004339	TRMT1L	89	68.147	ENSLACG00000008447	TRMT1L	96	67.945	Latimeria_chalumnae
ENSLAFG00000004339	TRMT1L	87	63.651	ENSLOCG00000001781	trmt1l	90	63.651	Lepisosteus_oculatus
ENSLAFG00000004339	TRMT1L	97	92.384	ENSMFAG00000037592	TRMT1L	100	91.156	Macaca_fascicularis
ENSLAFG00000004339	TRMT1L	97	92.243	ENSMMUG00000013879	TRMT1L	100	91.020	Macaca_mulatta
ENSLAFG00000004339	TRMT1L	97	92.525	ENSMNEG00000041637	TRMT1L	100	91.293	Macaca_nemestrina
ENSLAFG00000004339	TRMT1L	97	92.384	ENSMLEG00000004840	TRMT1L	100	91.156	Mandrillus_leucophaeus
ENSLAFG00000004339	TRMT1L	84	63.799	ENSMAMG00000015305	trmt1l	98	63.312	Mastacembelus_armatus
ENSLAFG00000004339	TRMT1L	88	61.103	ENSMZEG00005017822	trmt1l	93	61.103	Maylandia_zebra
ENSLAFG00000004339	TRMT1L	89	71.516	ENSMGAG00000000930	TRMT1L	99	71.516	Meleagris_gallopavo
ENSLAFG00000004339	TRMT1L	100	82.289	ENSMAUG00000019870	Trmt1l	100	81.880	Mesocricetus_auratus
ENSLAFG00000004339	TRMT1L	100	92.497	ENSMICG00000009494	TRMT1L	100	91.951	Microcebus_murinus
ENSLAFG00000004339	TRMT1L	100	85.773	ENSMOCG00000016453	Trmt1l	100	85.205	Microtus_ochrogaster
ENSLAFG00000004339	TRMT1L	85	61.821	ENSMMOG00000016961	trmt1l	97	61.342	Mola_mola
ENSLAFG00000004339	TRMT1L	99	73.960	ENSMODG00000007454	TRMT1L	85	74.154	Monodelphis_domestica
ENSLAFG00000004339	TRMT1L	89	60.030	ENSMALG00000019306	trmt1l	91	61.417	Monopterus_albus
ENSLAFG00000004339	TRMT1L	100	86.320	MGP_CAROLIEiJ_G0014693	Trmt1l	100	85.890	Mus_caroli
ENSLAFG00000004339	TRMT1L	100	86.594	ENSMUSG00000053286	Trmt1l	100	86.027	Mus_musculus
ENSLAFG00000004339	TRMT1L	100	86.221	MGP_PahariEiJ_G0027929	Trmt1l	100	84.836	Mus_pahari
ENSLAFG00000004339	TRMT1L	87	86.454	MGP_SPRETEiJ_G0015500	Trmt1l	100	85.629	Mus_spretus
ENSLAFG00000004339	TRMT1L	100	88.219	ENSMPUG00000011859	TRMT1L	100	89.315	Mustela_putorius_furo
ENSLAFG00000004339	TRMT1L	100	90.398	ENSMLUG00000001136	TRMT1L	100	90.014	Myotis_lucifugus
ENSLAFG00000004339	TRMT1L	100	86.008	ENSNGAG00000011685	Trmt1l	100	85.185	Nannospalax_galili
ENSLAFG00000004339	TRMT1L	65	62.658	ENSNBRG00000004053	trmt1l	95	62.179	Neolamprologus_brichardi
ENSLAFG00000004339	TRMT1L	100	92.224	ENSNLEG00000018030	TRMT1L	100	92.224	Nomascus_leucogenys
ENSLAFG00000004339	TRMT1L	88	71.739	ENSMEUG00000011344	TRMT1L	85	73.770	Notamacropus_eugenii
ENSLAFG00000004339	TRMT1L	90	76.570	ENSOPRG00000000680	TRMT1L	99	76.570	Ochotona_princeps
ENSLAFG00000004339	TRMT1L	100	84.636	ENSODEG00000000826	TRMT1L	100	83.813	Octodon_degus
ENSLAFG00000004339	TRMT1L	88	60.890	ENSONIG00000007823	trmt1l	100	62.679	Oreochromis_niloticus
ENSLAFG00000004339	TRMT1L	89	75.730	ENSOANG00000001010	TRMT1L	99	75.576	Ornithorhynchus_anatinus
ENSLAFG00000004339	TRMT1L	90	87.176	ENSOCUG00000004896	TRMT1L	92	87.634	Oryctolagus_cuniculus
ENSLAFG00000004339	TRMT1L	87	60.648	ENSORLG00000029610	trmt1l	99	62.378	Oryzias_latipes
ENSLAFG00000004339	TRMT1L	84	62.379	ENSORLG00020002203	trmt1l	95	60.455	Oryzias_latipes_hni
ENSLAFG00000004339	TRMT1L	88	60.802	ENSORLG00015021512	trmt1l	95	60.303	Oryzias_latipes_hsok
ENSLAFG00000004339	TRMT1L	80	60.531	ENSOMEG00000016275	trmt1l	87	60.152	Oryzias_melastigma
ENSLAFG00000004339	TRMT1L	89	80.247	ENSOGAG00000016186	TRMT1L	99	80.247	Otolemur_garnettii
ENSLAFG00000004339	TRMT1L	100	88.378	ENSOARG00000003786	TRMT1L	100	89.595	Ovis_aries
ENSLAFG00000004339	TRMT1L	100	91.542	ENSPPAG00000029141	TRMT1L	100	91.542	Pan_paniscus
ENSLAFG00000004339	TRMT1L	100	92.730	ENSPPRG00000023981	TRMT1L	100	91.221	Panthera_pardus
ENSLAFG00000004339	TRMT1L	100	92.867	ENSPTIG00000021754	TRMT1L	100	91.221	Panthera_tigris_altaica
ENSLAFG00000004339	TRMT1L	100	91.542	ENSPTRG00000001776	TRMT1L	100	91.542	Pan_troglodytes
ENSLAFG00000004339	TRMT1L	97	90.268	ENSPANG00000020890	TRMT1L	100	89.116	Papio_anubis
ENSLAFG00000004339	TRMT1L	91	60.863	ENSPKIG00000005941	trmt1l	90	62.461	Paramormyrops_kingsleyae
ENSLAFG00000004339	TRMT1L	88	76.899	ENSPSIG00000010011	TRMT1L	95	76.589	Pelodiscus_sinensis
ENSLAFG00000004339	TRMT1L	74	58.484	ENSPMGG00000021359	trmt1l	95	58.664	Periophthalmus_magnuspinnatus
ENSLAFG00000004339	TRMT1L	100	86.008	ENSPEMG00000000031	Trmt1l	100	86.283	Peromyscus_maniculatus_bairdii
ENSLAFG00000004339	TRMT1L	85	58.095	ENSPMAG00000005838	trmt1l	100	58.214	Petromyzon_marinus
ENSLAFG00000004339	TRMT1L	99	75.034	ENSPCIG00000002409	TRMT1L	97	74.898	Phascolarctos_cinereus
ENSLAFG00000004339	TRMT1L	92	59.057	ENSPFOG00000003872	trmt1l	100	61.897	Poecilia_formosa
ENSLAFG00000004339	TRMT1L	92	59.118	ENSPLAG00000010387	trmt1l	96	59.057	Poecilia_latipinna
ENSLAFG00000004339	TRMT1L	92	59.057	ENSPMEG00000011828	trmt1l	99	62.255	Poecilia_mexicana
ENSLAFG00000004339	TRMT1L	88	60.802	ENSPREG00000002866	trmt1l	92	60.802	Poecilia_reticulata
ENSLAFG00000004339	TRMT1L	100	91.269	ENSPPYG00000000416	TRMT1L	100	91.269	Pongo_abelii
ENSLAFG00000004339	TRMT1L	89	96.800	ENSPCAG00000008257	TRMT1L	89	96.800	Procavia_capensis
ENSLAFG00000004339	TRMT1L	86	82.673	ENSPCOG00000005682	TRMT1L	93	82.673	Propithecus_coquereli
ENSLAFG00000004339	TRMT1L	100	79.728	ENSPVAG00000005961	TRMT1L	100	80.272	Pteropus_vampyrus
ENSLAFG00000004339	TRMT1L	86	60.190	ENSPNYG00000005607	trmt1l	98	62.791	Pundamilia_nyererei
ENSLAFG00000004339	TRMT1L	87	62.016	ENSPNAG00000004389	trmt1l	89	62.187	Pygocentrus_nattereri
ENSLAFG00000004339	TRMT1L	100	86.183	ENSRNOG00000002580	Trmt1l	100	85.871	Rattus_norvegicus
ENSLAFG00000004339	TRMT1L	97	92.243	ENSRBIG00000042589	TRMT1L	100	91.020	Rhinopithecus_bieti
ENSLAFG00000004339	TRMT1L	97	92.243	ENSRROG00000032183	TRMT1L	100	91.020	Rhinopithecus_roxellana
ENSLAFG00000004339	TRMT1L	100	91.269	ENSSBOG00000029282	TRMT1L	100	90.587	Saimiri_boliviensis_boliviensis
ENSLAFG00000004339	TRMT1L	91	60.651	ENSSFOG00015004878	trmt1l	91	62.946	Scleropages_formosus
ENSLAFG00000004339	TRMT1L	61	67.416	ENSSMAG00000015425	trmt1l	90	70.330	Scophthalmus_maximus
ENSLAFG00000004339	TRMT1L	91	59.941	ENSSDUG00000021807	trmt1l	99	63.399	Seriola_dumerili
ENSLAFG00000004339	TRMT1L	87	61.059	ENSSLDG00000016579	trmt1l	99	63.235	Seriola_lalandi_dorsalis
ENSLAFG00000004339	TRMT1L	66	85.321	ENSSARG00000010135	TRMT1L	87	85.321	Sorex_araneus
ENSLAFG00000004339	TRMT1L	82	78.824	ENSSPUG00000003927	TRMT1L	98	77.647	Sphenodon_punctatus
ENSLAFG00000004339	TRMT1L	89	61.002	ENSSPAG00000008597	trmt1l	93	61.290	Stegastes_partitus
ENSLAFG00000004339	TRMT1L	99	84.884	ENSSSCG00000021393	TRMT1L	100	83.549	Sus_scrofa
ENSLAFG00000004339	TRMT1L	89	72.025	ENSTGUG00000003737	TRMT1L	96	72.025	Taeniopygia_guttata
ENSLAFG00000004339	TRMT1L	74	77.083	ENSTRUG00000002396	trmt1l	93	77.083	Takifugu_rubripes
ENSLAFG00000004339	TRMT1L	58	64.884	ENSTNIG00000005534	trmt1l	99	64.637	Tetraodon_nigroviridis
ENSLAFG00000004339	TRMT1L	86	87.624	ENSTBEG00000016498	TRMT1L	86	87.624	Tupaia_belangeri
ENSLAFG00000004339	TRMT1L	100	87.875	ENSTTRG00000005892	TRMT1L	100	88.828	Tursiops_truncatus
ENSLAFG00000004339	TRMT1L	100	91.156	ENSUAMG00000020936	TRMT1L	100	91.837	Ursus_americanus
ENSLAFG00000004339	TRMT1L	99	91.281	ENSUMAG00000021919	TRMT1L	99	91.962	Ursus_maritimus
ENSLAFG00000004339	TRMT1L	90	92.508	ENSVPAG00000011854	TRMT1L	100	92.355	Vicugna_pacos
ENSLAFG00000004339	TRMT1L	100	91.475	ENSVVUG00000009166	TRMT1L	100	91.837	Vulpes_vulpes
ENSLAFG00000004339	TRMT1L	71	60.232	ENSXETG00000004539	trmt1l	96	59.570	Xenopus_tropicalis
ENSLAFG00000004339	TRMT1L	82	61.977	ENSXCOG00000007372	trmt1l	92	61.809	Xiphophorus_couchianus
ENSLAFG00000004339	TRMT1L	90	59.670	ENSXMAG00000003575	trmt1l	98	62.355	Xiphophorus_maculatus