EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000004346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 91340 bases
Position: chrscaffold_16:14877548-14968887
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003624	PIN_4	PF13638.6	4.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000004348	-	1767	-	ENSLAFP00000003624	588 (aa)	-	G3SU34

Gene Model

Click here to download ENSLAFG00000004346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004346	-	99	85.690	ENSG00000116668	SWT1	64	85.690	Homo_sapiens
ENSLAFG00000004346	-	93	32.823	ENSAPOG00000014897	-	58	32.823	Acanthochromis_polyacanthus
ENSLAFG00000004346	-	100	86.224	ENSAMEG00000013585	SWT1	65	86.224	Ailuropoda_melanoleuca
ENSLAFG00000004346	-	93	32.877	ENSAOCG00000013932	swt1	58	32.877	Amphiprion_ocellaris
ENSLAFG00000004346	-	93	32.653	ENSAPEG00000009613	-	58	32.653	Amphiprion_percula
ENSLAFG00000004346	-	93	34.530	ENSATEG00000018946	swt1	57	34.530	Anabas_testudineus
ENSLAFG00000004346	-	98	55.440	ENSAPLG00000008607	SWT1	78	55.440	Anas_platyrhynchos
ENSLAFG00000004346	-	98	46.859	ENSACAG00000002276	SWT1	67	46.859	Anolis_carolinensis
ENSLAFG00000004346	-	99	85.690	ENSANAG00000027068	SWT1	64	85.690	Aotus_nancymaae
ENSLAFG00000004346	-	92	31.661	ENSACLG00000009742	swt1	68	31.661	Astatotilapia_calliptera
ENSLAFG00000004346	-	97	39.071	ENSAMXG00000010971	swt1	58	39.071	Astyanax_mexicanus
ENSLAFG00000004346	-	57	85.928	ENSBTAG00000004492	SWT1	53	85.928	Bos_taurus
ENSLAFG00000004346	-	100	84.694	ENSCJAG00000005544	SWT1	64	84.694	Callithrix_jacchus
ENSLAFG00000004346	-	100	88.776	ENSCAFG00000013543	SWT1	64	88.776	Canis_familiaris
ENSLAFG00000004346	-	100	88.776	ENSCAFG00020015648	SWT1	69	88.776	Canis_lupus_dingo
ENSLAFG00000004346	-	100	86.224	ENSCHIG00000023511	SWT1	100	85.448	Capra_hircus
ENSLAFG00000004346	-	100	88.095	ENSTSYG00000010470	SWT1	65	88.095	Carlito_syrichta
ENSLAFG00000004346	-	89	84.601	ENSCPOG00000014251	SWT1	65	84.601	Cavia_porcellus
ENSLAFG00000004346	-	99	86.882	ENSCCAG00000033926	SWT1	64	86.882	Cebus_capucinus
ENSLAFG00000004346	-	99	87.734	ENSCATG00000042210	SWT1	99	87.564	Cercocebus_atys
ENSLAFG00000004346	-	98	85.172	ENSCLAG00000013959	SWT1	65	85.172	Chinchilla_lanigera
ENSLAFG00000004346	-	99	87.394	ENSCSAG00000012895	SWT1	64	87.394	Chlorocebus_sabaeus
ENSLAFG00000004346	-	98	58.404	ENSCPBG00000015691	SWT1	64	58.404	Chrysemys_picta_bellii
ENSLAFG00000004346	-	99	85.860	ENSCANG00000032207	SWT1	99	85.690	Colobus_angolensis_palliatus
ENSLAFG00000004346	-	100	82.313	ENSCGRG00001022955	Swt1	68	82.313	Cricetulus_griseus_chok1gshd
ENSLAFG00000004346	-	100	82.313	ENSCGRG00000010224	Swt1	65	82.313	Cricetulus_griseus_crigri
ENSLAFG00000004346	-	95	33.779	ENSCSEG00000017352	swt1	75	33.556	Cynoglossus_semilaevis
ENSLAFG00000004346	-	97	37.629	ENSDARG00000094010	swt1	58	37.457	Danio_rerio
ENSLAFG00000004346	-	85	86.427	ENSDNOG00000005254	SWT1	60	86.427	Dasypus_novemcinctus
ENSLAFG00000004346	-	99	85.544	ENSDORG00000010531	Swt1	70	85.544	Dipodomys_ordii
ENSLAFG00000004346	-	100	82.143	ENSEASG00005005530	SWT1	69	82.143	Equus_asinus_asinus
ENSLAFG00000004346	-	100	84.354	ENSECAG00000012085	SWT1	68	84.354	Equus_caballus
ENSLAFG00000004346	-	82	88.506	ENSEEUG00000003664	SWT1	55	88.506	Erinaceus_europaeus
ENSLAFG00000004346	-	96	35.738	ENSELUG00000020565	swt1	57	35.738	Esox_lucius
ENSLAFG00000004346	-	100	86.054	ENSFCAG00000011286	SWT1	65	86.054	Felis_catus
ENSLAFG00000004346	-	96	54.196	ENSFALG00000003206	SWT1	63	54.196	Ficedula_albicollis
ENSLAFG00000004346	-	100	83.192	ENSFDAG00000007569	SWT1	66	83.192	Fukomys_damarensis
ENSLAFG00000004346	-	97	54.419	ENSGALG00000034230	SWT1	65	54.766	Gallus_gallus
ENSLAFG00000004346	-	95	32.060	ENSGAFG00000007803	-	60	32.060	Gambusia_affinis
ENSLAFG00000004346	-	98	57.804	ENSGAGG00000025050	SWT1	99	57.804	Gopherus_agassizii
ENSLAFG00000004346	-	88	87.500	ENSGGOG00000041167	-	95	87.500	Gorilla_gorilla
ENSLAFG00000004346	-	95	31.605	ENSHBUG00000006188	swt1	68	31.605	Haplochromis_burtoni
ENSLAFG00000004346	-	98	85.665	ENSHGLG00000006542	SWT1	67	85.665	Heterocephalus_glaber_female
ENSLAFG00000004346	-	98	85.492	ENSHGLG00100014408	SWT1	65	85.492	Heterocephalus_glaber_male
ENSLAFG00000004346	-	94	36.380	ENSIPUG00000009113	-	57	36.380	Ictalurus_punctatus
ENSLAFG00000004346	-	100	87.585	ENSSTOG00000010356	SWT1	66	87.585	Ictidomys_tridecemlineatus
ENSLAFG00000004346	-	99	78.694	ENSJJAG00000015927	Swt1	67	78.694	Jaculus_jaculus
ENSLAFG00000004346	-	94	33.895	ENSKMAG00000012533	swt1	58	33.895	Kryptolebias_marmoratus
ENSLAFG00000004346	-	95	34.826	ENSLBEG00000020663	-	59	34.826	Labrus_bergylta
ENSLAFG00000004346	-	98	50.341	ENSLACG00000009194	SWT1	83	50.341	Latimeria_chalumnae
ENSLAFG00000004346	-	92	41.516	ENSLOCG00000001749	swt1	98	40.775	Lepisosteus_oculatus
ENSLAFG00000004346	-	99	87.329	ENSMFAG00000031793	SWT1	99	87.329	Macaca_fascicularis
ENSLAFG00000004346	-	99	83.562	ENSMMUG00000013882	SWT1	99	83.562	Macaca_mulatta
ENSLAFG00000004346	-	99	87.158	ENSMNEG00000035502	SWT1	99	87.158	Macaca_nemestrina
ENSLAFG00000004346	-	99	87.564	ENSMLEG00000038692	SWT1	99	87.564	Mandrillus_leucophaeus
ENSLAFG00000004346	-	95	31.773	ENSMZEG00005018489	swt1	68	31.773	Maylandia_zebra
ENSLAFG00000004346	-	96	54.152	ENSMGAG00000000973	SWT1	96	54.152	Meleagris_gallopavo
ENSLAFG00000004346	-	100	73.129	ENSMAUG00000007996	Swt1	62	73.129	Mesocricetus_auratus
ENSLAFG00000004346	-	100	88.605	ENSMICG00000014975	SWT1	65	88.605	Microcebus_murinus
ENSLAFG00000004346	-	100	81.973	ENSMOCG00000009776	Swt1	64	81.973	Microtus_ochrogaster
ENSLAFG00000004346	-	99	72.109	ENSMODG00000007472	SWT1	64	72.109	Monodelphis_domestica
ENSLAFG00000004346	-	93	35.140	ENSMALG00000019308	swt1	57	35.140	Monopterus_albus
ENSLAFG00000004346	-	99	81.261	MGP_CAROLIEiJ_G0014692	Swt1	70	82.584	Mus_caroli
ENSLAFG00000004346	-	99	80.068	ENSMUSG00000052748	Swt1	70	80.337	Mus_musculus
ENSLAFG00000004346	-	100	83.844	MGP_PahariEiJ_G0027928	Swt1	70	84.270	Mus_pahari
ENSLAFG00000004346	-	99	81.090	MGP_SPRETEiJ_G0015499	Swt1	70	82.584	Mus_spretus
ENSLAFG00000004346	-	100	85.544	ENSMPUG00000011913	SWT1	65	85.544	Mustela_putorius_furo
ENSLAFG00000004346	-	100	84.184	ENSMLUG00000001142	SWT1	64	84.184	Myotis_lucifugus
ENSLAFG00000004346	-	98	84.843	ENSNGAG00000021080	Swt1	64	84.014	Nannospalax_galili
ENSLAFG00000004346	-	99	84.838	ENSNLEG00000018031	SWT1	64	84.838	Nomascus_leucogenys
ENSLAFG00000004346	-	96	56.085	ENSMEUG00000000236	-	63	56.085	Notamacropus_eugenii
ENSLAFG00000004346	-	82	72.131	ENSOPRG00000000692	SWT1	56	72.131	Ochotona_princeps
ENSLAFG00000004346	-	93	32.387	ENSONIG00000009994	swt1	99	33.455	Oreochromis_niloticus
ENSLAFG00000004346	-	98	66.894	ENSOANG00000001013	-	74	66.894	Ornithorhynchus_anatinus
ENSLAFG00000004346	-	99	81.538	ENSOCUG00000004901	SWT1	65	81.538	Oryctolagus_cuniculus
ENSLAFG00000004346	-	93	33.220	ENSORLG00000009682	swt1	58	33.220	Oryzias_latipes
ENSLAFG00000004346	-	93	33.447	ENSORLG00020011654	swt1	61	32.843	Oryzias_latipes_hni
ENSLAFG00000004346	-	96	32.516	ENSORLG00015007734	swt1	61	32.516	Oryzias_latipes_hsok
ENSLAFG00000004346	-	96	33.388	ENSOMEG00000006607	swt1	59	33.388	Oryzias_melastigma
ENSLAFG00000004346	-	100	86.905	ENSOGAG00000016195	SWT1	65	86.905	Otolemur_garnettii
ENSLAFG00000004346	-	100	86.565	ENSOARG00000004156	SWT1	64	86.565	Ovis_aries
ENSLAFG00000004346	-	99	85.860	ENSPPAG00000021400	SWT1	64	85.860	Pan_paniscus
ENSLAFG00000004346	-	100	86.395	ENSPPRG00000023754	SWT1	65	86.395	Panthera_pardus
ENSLAFG00000004346	-	100	86.224	ENSPTIG00000021889	SWT1	65	86.224	Panthera_tigris_altaica
ENSLAFG00000004346	-	99	85.690	ENSPTRG00000001777	SWT1	64	85.690	Pan_troglodytes
ENSLAFG00000004346	-	99	87.394	ENSPANG00000005099	SWT1	99	87.223	Papio_anubis
ENSLAFG00000004346	-	96	34.957	ENSPKIG00000005979	swt1	59	34.957	Paramormyrops_kingsleyae
ENSLAFG00000004346	-	98	57.192	ENSPSIG00000008961	SWT1	63	57.192	Pelodiscus_sinensis
ENSLAFG00000004346	-	100	81.633	ENSPEMG00000008208	Swt1	64	81.633	Peromyscus_maniculatus_bairdii
ENSLAFG00000004346	-	100	72.204	ENSPCIG00000002443	SWT1	65	72.204	Phascolarctos_cinereus
ENSLAFG00000004346	-	95	32.045	ENSPFOG00000010988	-	70	32.045	Poecilia_formosa
ENSLAFG00000004346	-	93	32.095	ENSPLAG00000022908	-	58	32.095	Poecilia_latipinna
ENSLAFG00000004346	-	93	32.095	ENSPMEG00000006943	-	58	32.095	Poecilia_mexicana
ENSLAFG00000004346	-	99	84.838	ENSPPYG00000000415	SWT1	64	84.838	Pongo_abelii
ENSLAFG00000004346	-	99	77.342	ENSPCAG00000008337	SWT1	65	77.342	Procavia_capensis
ENSLAFG00000004346	-	65	84.615	ENSPCOG00000018195	-	54	84.615	Propithecus_coquereli
ENSLAFG00000004346	-	99	80.855	ENSPVAG00000005968	SWT1	65	80.855	Pteropus_vampyrus
ENSLAFG00000004346	-	95	31.773	ENSPNYG00000012934	swt1	68	31.773	Pundamilia_nyererei
ENSLAFG00000004346	-	95	37.173	ENSPNAG00000017795	swt1	58	37.326	Pygocentrus_nattereri
ENSLAFG00000004346	-	100	83.844	ENSRNOG00000032258	Swt1	67	83.844	Rattus_norvegicus
ENSLAFG00000004346	-	99	82.453	ENSRBIG00000040630	SWT1	99	82.283	Rhinopithecus_bieti
ENSLAFG00000004346	-	59	84.058	ENSRROG00000028596	SWT1	53	84.058	Rhinopithecus_roxellana
ENSLAFG00000004346	-	99	86.371	ENSSBOG00000028825	SWT1	64	86.371	Saimiri_boliviensis_boliviensis
ENSLAFG00000004346	-	100	73.154	ENSSHAG00000009241	SWT1	64	73.154	Sarcophilus_harrisii
ENSLAFG00000004346	-	96	38.004	ENSSFOG00015004895	swt1	57	38.004	Scleropages_formosus
ENSLAFG00000004346	-	93	33.733	ENSSDUG00000012345	swt1	58	33.729	Seriola_dumerili
ENSLAFG00000004346	-	93	33.562	ENSSLDG00000003821	swt1	58	33.559	Seriola_lalandi_dorsalis
ENSLAFG00000004346	-	89	49.904	ENSSARG00000011524	-	99	49.904	Sorex_araneus
ENSLAFG00000004346	-	98	55.822	ENSSPUG00000003899	SWT1	63	55.822	Sphenodon_punctatus
ENSLAFG00000004346	-	93	31.561	ENSSPAG00000001030	swt1	58	31.561	Stegastes_partitus
ENSLAFG00000004346	-	100	88.265	ENSSSCG00000015569	SWT1	65	88.265	Sus_scrofa
ENSLAFG00000004346	-	95	54.011	ENSTGUG00000003718	-	100	54.011	Taeniopygia_guttata
ENSLAFG00000004346	-	96	33.959	ENSTRUG00000006420	swt1	62	33.959	Takifugu_rubripes
ENSLAFG00000004346	-	51	42.071	ENSTNIG00000018118	-	89	42.071	Tetraodon_nigroviridis
ENSLAFG00000004346	-	99	84.103	ENSTTRG00000005914	SWT1	64	84.103	Tursiops_truncatus
ENSLAFG00000004346	-	100	86.905	ENSUAMG00000020937	SWT1	70	86.905	Ursus_americanus
ENSLAFG00000004346	-	100	86.905	ENSUMAG00000021918	SWT1	65	86.905	Ursus_maritimus
ENSLAFG00000004346	-	88	87.707	ENSVPAG00000011855	SWT1	57	87.707	Vicugna_pacos
ENSLAFG00000004346	-	100	89.116	ENSVVUG00000009182	SWT1	67	89.116	Vulpes_vulpes
ENSLAFG00000004346	-	93	32.131	ENSXMAG00000023472	-	59	31.993	Xiphophorus_maculatus