EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000004512 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 16346 bases
Position: chrscaffold_19:7620769-7637114
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003764	HAT	PF02184.16	3.3e-42	1	2
ENSLAFP00000003764	HAT	PF02184.16	3.3e-42	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000004513	CRNKL1-201	2067	-	ENSLAFP00000003764	688 (aa)	-	G3SUE4

Gene Model

Click here to download ENSLAFG00000004512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004512	CRNKL1	100	96.802	ENSG00000101343	CRNKL1	100	96.802	Homo_sapiens
ENSLAFG00000004512	CRNKL1	99	86.443	ENSAPOG00000009705	crnkl1	97	85.651	Acanthochromis_polyacanthus
ENSLAFG00000004512	CRNKL1	100	98.983	ENSAMEG00000000270	CRNKL1	83	98.983	Ailuropoda_melanoleuca
ENSLAFG00000004512	CRNKL1	98	86.370	ENSACIG00000015267	crnkl1	89	85.630	Amphilophus_citrinellus
ENSLAFG00000004512	CRNKL1	99	86.589	ENSAOCG00000021964	crnkl1	91	85.860	Amphiprion_ocellaris
ENSLAFG00000004512	CRNKL1	99	86.443	ENSAPEG00000015041	crnkl1	91	85.714	Amphiprion_percula
ENSLAFG00000004512	CRNKL1	99	86.490	ENSATEG00000001068	crnkl1	89	85.756	Anabas_testudineus
ENSLAFG00000004512	CRNKL1	97	92.399	ENSAPLG00000013105	CRNKL1	97	92.481	Anas_platyrhynchos
ENSLAFG00000004512	CRNKL1	99	92.398	ENSACAG00000005284	CRNKL1	99	91.667	Anolis_carolinensis
ENSLAFG00000004512	CRNKL1	92	97.314	ENSANAG00000024889	CRNKL1	100	97.314	Aotus_nancymaae
ENSLAFG00000004512	CRNKL1	99	87.168	ENSACLG00000010813	crnkl1	90	86.431	Astatotilapia_calliptera
ENSLAFG00000004512	CRNKL1	97	87.820	ENSAMXG00000018334	crnkl1	92	85.131	Astyanax_mexicanus
ENSLAFG00000004512	CRNKL1	100	97.820	ENSBTAG00000008472	CRNKL1	99	97.820	Bos_taurus
ENSLAFG00000004512	CRNKL1	93	62.053	WBGene00019762	M03F8.3	93	60.719	Caenorhabditis_elegans
ENSLAFG00000004512	CRNKL1	100	96.948	ENSCJAG00000005393	CRNKL1	100	96.948	Callithrix_jacchus
ENSLAFG00000004512	CRNKL1	100	98.692	ENSCAFG00000005333	CRNKL1	94	98.692	Canis_familiaris
ENSLAFG00000004512	CRNKL1	100	98.692	ENSCAFG00020027488	CRNKL1	100	98.692	Canis_lupus_dingo
ENSLAFG00000004512	CRNKL1	100	96.948	ENSCHIG00000013171	CRNKL1	99	96.948	Capra_hircus
ENSLAFG00000004512	CRNKL1	100	97.384	ENSTSYG00000004197	CRNKL1	100	97.384	Carlito_syrichta
ENSLAFG00000004512	CRNKL1	95	96.123	ENSCAPG00000010501	CRNKL1	99	96.123	Cavia_aperea
ENSLAFG00000004512	CRNKL1	100	96.221	ENSCPOG00000004418	CRNKL1	100	95.494	Cavia_porcellus
ENSLAFG00000004512	CRNKL1	100	96.657	ENSCCAG00000027037	CRNKL1	100	96.657	Cebus_capucinus
ENSLAFG00000004512	CRNKL1	100	96.802	ENSCATG00000034247	CRNKL1	100	96.802	Cercocebus_atys
ENSLAFG00000004512	CRNKL1	100	96.657	ENSCLAG00000013859	CRNKL1	100	96.657	Chinchilla_lanigera
ENSLAFG00000004512	CRNKL1	100	96.802	ENSCSAG00000011434	CRNKL1	100	96.802	Chlorocebus_sabaeus
ENSLAFG00000004512	CRNKL1	100	98.110	ENSCHOG00000006371	CRNKL1	84	98.110	Choloepus_hoffmanni
ENSLAFG00000004512	CRNKL1	99	93.732	ENSCPBG00000023501	CRNKL1	99	93.003	Chrysemys_picta_bellii
ENSLAFG00000004512	CRNKL1	96	69.532	ENSCING00000002709	-	99	67.299	Ciona_intestinalis
ENSLAFG00000004512	CRNKL1	100	96.657	ENSCANG00000038789	CRNKL1	100	96.657	Colobus_angolensis_palliatus
ENSLAFG00000004512	CRNKL1	100	97.384	ENSCGRG00001000687	-	99	97.384	Cricetulus_griseus_chok1gshd
ENSLAFG00000004512	CRNKL1	100	97.384	ENSCGRG00001001115	-	99	97.384	Cricetulus_griseus_chok1gshd
ENSLAFG00000004512	CRNKL1	100	97.384	ENSCGRG00000007854	Crnkl1	99	97.384	Cricetulus_griseus_crigri
ENSLAFG00000004512	CRNKL1	98	86.243	ENSCSEG00000005594	crnkl1	86	85.503	Cynoglossus_semilaevis
ENSLAFG00000004512	CRNKL1	97	87.406	ENSCVAG00000015172	crnkl1	92	84.694	Cyprinodon_variegatus
ENSLAFG00000004512	CRNKL1	96	86.576	ENSDARG00000007901	crnkl1	90	84.526	Danio_rerio
ENSLAFG00000004512	CRNKL1	99	98.102	ENSDNOG00000016226	CRNKL1	95	98.102	Dasypus_novemcinctus
ENSLAFG00000004512	CRNKL1	97	87.481	ENSDORG00000030174	-	99	86.736	Dipodomys_ordii
ENSLAFG00000004512	CRNKL1	100	95.677	ENSDORG00000000394	-	100	95.677	Dipodomys_ordii
ENSLAFG00000004512	CRNKL1	97	87.928	ENSDORG00000023724	-	99	87.183	Dipodomys_ordii
ENSLAFG00000004512	CRNKL1	97	69.129	FBgn0000377	crn	95	68.405	Drosophila_melanogaster
ENSLAFG00000004512	CRNKL1	100	85.320	ENSETEG00000003711	CRNKL1	84	84.593	Echinops_telfairi
ENSLAFG00000004512	CRNKL1	99	60.956	ENSEBUG00000013461	crnkl1	96	57.456	Eptatretus_burgeri
ENSLAFG00000004512	CRNKL1	100	98.692	ENSEASG00005002072	CRNKL1	100	98.692	Equus_asinus_asinus
ENSLAFG00000004512	CRNKL1	100	98.692	ENSECAG00000022215	CRNKL1	100	98.692	Equus_caballus
ENSLAFG00000004512	CRNKL1	99	95.888	ENSEEUG00000000413	CRNKL1	92	95.203	Erinaceus_europaeus
ENSLAFG00000004512	CRNKL1	97	85.949	ENSELUG00000015424	crnkl1	97	83.796	Esox_lucius
ENSLAFG00000004512	CRNKL1	100	98.983	ENSFCAG00000000714	CRNKL1	100	98.983	Felis_catus
ENSLAFG00000004512	CRNKL1	98	91.667	ENSFALG00000004611	CRNKL1	99	91.742	Ficedula_albicollis
ENSLAFG00000004512	CRNKL1	100	96.657	ENSFDAG00000000604	CRNKL1	100	96.657	Fukomys_damarensis
ENSLAFG00000004512	CRNKL1	98	86.795	ENSFHEG00000013163	crnkl1	88	86.053	Fundulus_heteroclitus
ENSLAFG00000004512	CRNKL1	97	86.099	ENSGMOG00000007609	crnkl1	94	83.697	Gadus_morhua
ENSLAFG00000004512	CRNKL1	99	93.440	ENSGALG00000008429	CRNKL1	99	92.711	Gallus_gallus
ENSLAFG00000004512	CRNKL1	97	86.957	ENSGAFG00000014249	crnkl1	90	84.548	Gambusia_affinis
ENSLAFG00000004512	CRNKL1	99	85.109	ENSGACG00000011852	crnkl1	91	84.380	Gasterosteus_aculeatus
ENSLAFG00000004512	CRNKL1	95	92.530	ENSGAGG00000021233	CRNKL1	100	92.730	Gopherus_agassizii
ENSLAFG00000004512	CRNKL1	100	96.802	ENSGGOG00000014176	CRNKL1	100	96.802	Gorilla_gorilla
ENSLAFG00000004512	CRNKL1	99	87.021	ENSHBUG00000005246	crnkl1	90	86.283	Haplochromis_burtoni
ENSLAFG00000004512	CRNKL1	100	96.657	ENSHGLG00000010856	CRNKL1	100	96.657	Heterocephalus_glaber_female
ENSLAFG00000004512	CRNKL1	100	96.657	ENSHGLG00100011521	CRNKL1	100	96.657	Heterocephalus_glaber_male
ENSLAFG00000004512	CRNKL1	97	84.581	ENSHCOG00000006420	crnkl1	98	82.430	Hippocampus_comes
ENSLAFG00000004512	CRNKL1	97	75.826	ENSIPUG00000006836	-	96	75.841	Ictalurus_punctatus
ENSLAFG00000004512	CRNKL1	93	68.339	ENSIPUG00000000315	-	100	68.760	Ictalurus_punctatus
ENSLAFG00000004512	CRNKL1	94	87.211	ENSIPUG00000006751	crnkl1	91	86.343	Ictalurus_punctatus
ENSLAFG00000004512	CRNKL1	100	97.965	ENSSTOG00000014747	CRNKL1	100	97.965	Ictidomys_tridecemlineatus
ENSLAFG00000004512	CRNKL1	100	95.739	ENSJJAG00000016926	Crnkl1	100	95.739	Jaculus_jaculus
ENSLAFG00000004512	CRNKL1	99	86.384	ENSKMAG00000003620	crnkl1	86	85.652	Kryptolebias_marmoratus
ENSLAFG00000004512	CRNKL1	97	69.733	ENSLBEG00000003543	crnkl1	92	70.219	Labrus_bergylta
ENSLAFG00000004512	CRNKL1	99	88.158	ENSLACG00000001129	CRNKL1	99	87.427	Latimeria_chalumnae
ENSLAFG00000004512	CRNKL1	97	89.173	ENSLOCG00000016889	crnkl1	95	87.007	Lepisosteus_oculatus
ENSLAFG00000004512	CRNKL1	100	96.802	ENSMFAG00000039893	CRNKL1	100	96.802	Macaca_fascicularis
ENSLAFG00000004512	CRNKL1	100	96.802	ENSMMUG00000007709	CRNKL1	100	96.802	Macaca_mulatta
ENSLAFG00000004512	CRNKL1	100	96.802	ENSMNEG00000037490	CRNKL1	100	96.802	Macaca_nemestrina
ENSLAFG00000004512	CRNKL1	100	96.802	ENSMLEG00000034885	CRNKL1	100	96.802	Mandrillus_leucophaeus
ENSLAFG00000004512	CRNKL1	99	85.860	ENSMAMG00000008757	crnkl1	90	85.131	Mastacembelus_armatus
ENSLAFG00000004512	CRNKL1	99	87.168	ENSMZEG00005022345	crnkl1	90	86.431	Maylandia_zebra
ENSLAFG00000004512	CRNKL1	99	92.722	ENSMGAG00000003452	CRNKL1	94	91.994	Meleagris_gallopavo
ENSLAFG00000004512	CRNKL1	100	97.238	ENSMAUG00000020764	Crnkl1	99	97.238	Mesocricetus_auratus
ENSLAFG00000004512	CRNKL1	100	97.674	ENSMICG00000006048	CRNKL1	100	97.674	Microcebus_murinus
ENSLAFG00000004512	CRNKL1	100	88.857	ENSMOCG00000000681	-	99	88.857	Microtus_ochrogaster
ENSLAFG00000004512	CRNKL1	97	69.265	ENSMOCG00000004179	-	96	68.889	Microtus_ochrogaster
ENSLAFG00000004512	CRNKL1	92	85.759	ENSMMOG00000017601	crnkl1	97	84.968	Mola_mola
ENSLAFG00000004512	CRNKL1	100	92.826	ENSMODG00000005961	-	99	92.109	Monodelphis_domestica
ENSLAFG00000004512	CRNKL1	100	87.064	ENSMODG00000010857	-	99	86.337	Monodelphis_domestica
ENSLAFG00000004512	CRNKL1	98	63.346	ENSMALG00000011211	crnkl1	89	62.610	Monopterus_albus
ENSLAFG00000004512	CRNKL1	100	97.820	MGP_CAROLIEiJ_G0024394	Crnkl1	99	97.820	Mus_caroli
ENSLAFG00000004512	CRNKL1	100	97.965	ENSMUSG00000001767	Crnkl1	99	97.965	Mus_musculus
ENSLAFG00000004512	CRNKL1	100	95.930	MGP_PahariEiJ_G0025838	Crnkl1	99	95.203	Mus_pahari
ENSLAFG00000004512	CRNKL1	100	97.820	MGP_SPRETEiJ_G0025312	Crnkl1	99	97.820	Mus_spretus
ENSLAFG00000004512	CRNKL1	100	98.837	ENSMPUG00000001226	CRNKL1	100	98.837	Mustela_putorius_furo
ENSLAFG00000004512	CRNKL1	100	98.258	ENSMLUG00000016513	CRNKL1	89	98.258	Myotis_lucifugus
ENSLAFG00000004512	CRNKL1	100	95.435	ENSNGAG00000023097	Crnkl1	100	95.435	Nannospalax_galili
ENSLAFG00000004512	CRNKL1	99	87.316	ENSNBRG00000007867	crnkl1	89	86.578	Neolamprologus_brichardi
ENSLAFG00000004512	CRNKL1	100	93.169	ENSNLEG00000009862	CRNKL1	100	92.442	Nomascus_leucogenys
ENSLAFG00000004512	CRNKL1	97	95.970	ENSMEUG00000012167	-	99	95.940	Notamacropus_eugenii
ENSLAFG00000004512	CRNKL1	100	86.212	ENSMEUG00000002361	-	99	85.486	Notamacropus_eugenii
ENSLAFG00000004512	CRNKL1	75	67.375	ENSOPRG00000009242	-	61	67.375	Ochotona_princeps
ENSLAFG00000004512	CRNKL1	100	96.512	ENSODEG00000012175	CRNKL1	100	95.785	Octodon_degus
ENSLAFG00000004512	CRNKL1	99	86.861	ENSONIG00000018728	crnkl1	89	86.873	Oreochromis_niloticus
ENSLAFG00000004512	CRNKL1	99	97.668	ENSOCUG00000015484	CRNKL1	83	97.668	Oryctolagus_cuniculus
ENSLAFG00000004512	CRNKL1	99	84.111	ENSORLG00000017240	crnkl1	93	83.382	Oryzias_latipes
ENSLAFG00000004512	CRNKL1	99	84.402	ENSORLG00020001742	crnkl1	91	83.673	Oryzias_latipes_hni
ENSLAFG00000004512	CRNKL1	99	84.257	ENSORLG00015019564	crnkl1	91	83.528	Oryzias_latipes_hsok
ENSLAFG00000004512	CRNKL1	99	85.131	ENSOMEG00000019895	crnkl1	91	84.402	Oryzias_melastigma
ENSLAFG00000004512	CRNKL1	100	97.093	ENSOGAG00000011544	CRNKL1	100	97.093	Otolemur_garnettii
ENSLAFG00000004512	CRNKL1	100	98.110	ENSOARG00000002150	CRNKL1	89	98.110	Ovis_aries
ENSLAFG00000004512	CRNKL1	99	95.448	ENSPPAG00000027847	CRNKL1	83	94.767	Pan_paniscus
ENSLAFG00000004512	CRNKL1	100	98.983	ENSPPRG00000001955	CRNKL1	100	98.983	Panthera_pardus
ENSLAFG00000004512	CRNKL1	100	98.983	ENSPTIG00000007393	CRNKL1	100	98.983	Panthera_tigris_altaica
ENSLAFG00000004512	CRNKL1	100	96.657	ENSPTRG00000030609	CRNKL1	100	96.657	Pan_troglodytes
ENSLAFG00000004512	CRNKL1	100	96.802	ENSPANG00000017420	CRNKL1	100	96.802	Papio_anubis
ENSLAFG00000004512	CRNKL1	96	82.583	ENSPKIG00000017093	crnkl1	89	81.113	Paramormyrops_kingsleyae
ENSLAFG00000004512	CRNKL1	99	92.690	ENSPSIG00000012705	CRNKL1	97	93.835	Pelodiscus_sinensis
ENSLAFG00000004512	CRNKL1	99	79.736	ENSPMGG00000006263	crnkl1	96	79.001	Periophthalmus_magnuspinnatus
ENSLAFG00000004512	CRNKL1	100	97.529	ENSPEMG00000000073	-	99	97.529	Peromyscus_maniculatus_bairdii
ENSLAFG00000004512	CRNKL1	99	82.003	ENSPMAG00000002250	crnkl1	99	81.277	Petromyzon_marinus
ENSLAFG00000004512	CRNKL1	100	95.058	ENSPCIG00000025825	CRNKL1	96	94.331	Phascolarctos_cinereus
ENSLAFG00000004512	CRNKL1	97	86.807	ENSPFOG00000005102	crnkl1	93	84.180	Poecilia_formosa
ENSLAFG00000004512	CRNKL1	97	86.807	ENSPLAG00000007288	crnkl1	90	84.058	Poecilia_latipinna
ENSLAFG00000004512	CRNKL1	97	86.957	ENSPMEG00000008865	crnkl1	93	84.325	Poecilia_mexicana
ENSLAFG00000004512	CRNKL1	97	86.507	ENSPREG00000012615	crnkl1	92	83.942	Poecilia_reticulata
ENSLAFG00000004512	CRNKL1	100	96.512	ENSPPYG00000010747	CRNKL1	81	96.512	Pongo_abelii
ENSLAFG00000004512	CRNKL1	99	93.245	ENSPCAG00000003296	CRNKL1	85	92.587	Procavia_capensis
ENSLAFG00000004512	CRNKL1	100	96.366	ENSPCOG00000017608	CRNKL1	83	96.366	Propithecus_coquereli
ENSLAFG00000004512	CRNKL1	100	98.692	ENSPVAG00000006207	CRNKL1	83	98.692	Pteropus_vampyrus
ENSLAFG00000004512	CRNKL1	99	87.021	ENSPNYG00000001977	crnkl1	90	86.283	Pundamilia_nyererei
ENSLAFG00000004512	CRNKL1	98	88.376	ENSPNAG00000001507	crnkl1	98	83.140	Pygocentrus_nattereri
ENSLAFG00000004512	CRNKL1	100	97.965	ENSRNOG00000010587	Crnkl1	99	97.965	Rattus_norvegicus
ENSLAFG00000004512	CRNKL1	100	97.529	ENSRNOG00000040045	Crnkl1	99	97.529	Rattus_norvegicus
ENSLAFG00000004512	CRNKL1	100	96.657	ENSRBIG00000031770	CRNKL1	100	96.657	Rhinopithecus_bieti
ENSLAFG00000004512	CRNKL1	100	96.512	ENSRROG00000040450	CRNKL1	100	96.512	Rhinopithecus_roxellana
ENSLAFG00000004512	CRNKL1	94	37.971	YLR117C	CLF1	99	38.171	Saccharomyces_cerevisiae
ENSLAFG00000004512	CRNKL1	100	96.657	ENSSBOG00000029672	CRNKL1	100	96.657	Saimiri_boliviensis_boliviensis
ENSLAFG00000004512	CRNKL1	94	75.730	ENSSHAG00000011199	CRNKL1	98	75.963	Sarcophilus_harrisii
ENSLAFG00000004512	CRNKL1	96	87.632	ENSSFOG00015000946	crnkl1	89	85.255	Scleropages_formosus
ENSLAFG00000004512	CRNKL1	99	85.007	ENSSMAG00000007933	crnkl1	89	84.279	Scophthalmus_maximus
ENSLAFG00000004512	CRNKL1	99	79.622	ENSSDUG00000012625	crnkl1	87	79.559	Seriola_dumerili
ENSLAFG00000004512	CRNKL1	99	86.297	ENSSLDG00000021413	crnkl1	88	86.303	Seriola_lalandi_dorsalis
ENSLAFG00000004512	CRNKL1	100	97.529	ENSSARG00000006443	CRNKL1	82	97.529	Sorex_araneus
ENSLAFG00000004512	CRNKL1	99	93.275	ENSSPUG00000005254	CRNKL1	99	92.544	Sphenodon_punctatus
ENSLAFG00000004512	CRNKL1	99	86.006	ENSSPAG00000016150	crnkl1	86	87.256	Stegastes_partitus
ENSLAFG00000004512	CRNKL1	100	98.837	ENSSSCG00000038587	CRNKL1	99	98.837	Sus_scrofa
ENSLAFG00000004512	CRNKL1	99	92.140	ENSTGUG00000007645	CRNKL1	98	91.412	Taeniopygia_guttata
ENSLAFG00000004512	CRNKL1	98	80.775	ENSTRUG00000015417	crnkl1	90	79.412	Takifugu_rubripes
ENSLAFG00000004512	CRNKL1	97	85.329	ENSTNIG00000010710	crnkl1	99	83.261	Tetraodon_nigroviridis
ENSLAFG00000004512	CRNKL1	92	96.682	ENSTBEG00000001304	CRNKL1	82	96.682	Tupaia_belangeri
ENSLAFG00000004512	CRNKL1	91	94.249	ENSTTRG00000000484	CRNKL1	81	93.523	Tursiops_truncatus
ENSLAFG00000004512	CRNKL1	100	98.983	ENSUAMG00000018586	CRNKL1	100	98.983	Ursus_americanus
ENSLAFG00000004512	CRNKL1	100	98.983	ENSUMAG00000024957	CRNKL1	100	98.983	Ursus_maritimus
ENSLAFG00000004512	CRNKL1	100	98.692	ENSVVUG00000012559	CRNKL1	82	98.692	Vulpes_vulpes
ENSLAFG00000004512	CRNKL1	99	90.843	ENSXETG00000009698	crnkl1	99	90.116	Xenopus_tropicalis
ENSLAFG00000004512	CRNKL1	97	86.078	ENSXCOG00000000824	crnkl1	91	83.626	Xiphophorus_couchianus
ENSLAFG00000004512	CRNKL1	97	86.957	ENSXMAG00000006896	crnkl1	91	84.480	Xiphophorus_maculatus