EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000004524 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: KIAA0929|MINT|RBM15C|SHARP
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 168083 bases
Position: chrscaffold_26:6307732-6475814
Accession: 100654888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000003776	RRM_5	PF13893.6	1.6e-07	1	2
ENSLAFP00000003776	RRM_5	PF13893.6	1.6e-07	2	2
ENSLAFP00000029376	RRM_5	PF13893.6	8.5e-07	1	2
ENSLAFP00000029376	RRM_5	PF13893.6	8.5e-07	2	2
ENSLAFP00000003776	RRM_1	PF00076.22	3.5e-35	1	3
ENSLAFP00000003776	RRM_1	PF00076.22	3.5e-35	2	3
ENSLAFP00000003776	RRM_1	PF00076.22	3.5e-35	3	3
ENSLAFP00000029376	RRM_1	PF00076.22	2.3e-34	1	3
ENSLAFP00000029376	RRM_1	PF00076.22	2.3e-34	2	3
ENSLAFP00000029376	RRM_1	PF00076.22	2.3e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000029779	SPEN-202	10941	XM_010593092	ENSLAFP00000029376	3647 (aa)	XP_010591394	G3UNG7
ENSLAFT00000004519	SPEN-203	993	-	ENSLAFP00000003769	331 (aa)	-	G3SUE9
ENSLAFT00000004526	SPEN-201	11001	-	ENSLAFP00000003776	3666 (aa)	-	G3SUF2

Gene Model

Click here to download ENSLAFG00000004524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004524	SPEN	100	87.289	ENSG00000065526	SPEN	99	97.980	Homo_sapiens
ENSLAFG00000004524	SPEN	92	80.874	ENSAPOG00000009853	-	90	67.170	Acanthochromis_polyacanthus
ENSLAFG00000004524	SPEN	83	84.615	ENSAPOG00000011411	si:ch1073-335m2.2	88	84.615	Acanthochromis_polyacanthus
ENSLAFG00000004524	SPEN	99	87.336	ENSAMEG00000011817	SPEN	99	87.172	Ailuropoda_melanoleuca
ENSLAFG00000004524	SPEN	76	61.111	ENSAOCG00000008077	si:ch1073-335m2.2	88	61.111	Amphiprion_ocellaris
ENSLAFG00000004524	SPEN	87	71.098	ENSAOCG00000014505	-	99	45.493	Amphiprion_ocellaris
ENSLAFG00000004524	SPEN	79	77.778	ENSAPEG00000010288	-	99	45.477	Amphiprion_percula
ENSLAFG00000004524	SPEN	82	68.240	ENSAPEG00000013515	si:ch1073-335m2.2	87	68.240	Amphiprion_percula
ENSLAFG00000004524	SPEN	79	84.211	ENSATEG00000007674	si:ch1073-335m2.2	87	84.211	Anabas_testudineus
ENSLAFG00000004524	SPEN	96	79.085	ENSATEG00000005627	-	99	45.266	Anabas_testudineus
ENSLAFG00000004524	SPEN	99	70.536	ENSAPLG00000012618	SPEN	100	70.970	Anas_platyrhynchos
ENSLAFG00000004524	SPEN	97	63.587	ENSACAG00000013761	SPEN	100	63.766	Anolis_carolinensis
ENSLAFG00000004524	SPEN	100	86.868	ENSANAG00000034428	SPEN	99	86.977	Aotus_nancymaae
ENSLAFG00000004524	SPEN	93	77.778	ENSACLG00000016922	-	98	65.726	Astatotilapia_calliptera
ENSLAFG00000004524	SPEN	81	85.207	ENSACLG00000021433	si:ch1073-335m2.2	75	85.207	Astatotilapia_calliptera
ENSLAFG00000004524	SPEN	86	79.870	ENSAMXG00000012485	spen	99	48.111	Astyanax_mexicanus
ENSLAFG00000004524	SPEN	100	86.703	ENSBTAG00000018729	SPEN	99	86.813	Bos_taurus
ENSLAFG00000004524	SPEN	100	86.284	ENSCJAG00000008527	SPEN	99	86.392	Callithrix_jacchus
ENSLAFG00000004524	SPEN	88	86.290	ENSCAFG00000016132	-	98	86.228	Canis_familiaris
ENSLAFG00000004524	SPEN	100	87.077	ENSCHIG00000025070	SPEN	99	87.158	Capra_hircus
ENSLAFG00000004524	SPEN	92	86.171	ENSTSYG00000036016	SPEN	99	86.120	Carlito_syrichta
ENSLAFG00000004524	SPEN	99	80.249	ENSCAPG00000013803	SPEN	100	79.086	Cavia_aperea
ENSLAFG00000004524	SPEN	99	80.273	ENSCPOG00000014036	SPEN	100	79.563	Cavia_porcellus
ENSLAFG00000004524	SPEN	100	81.939	ENSCCAG00000020258	SPEN	99	85.024	Cebus_capucinus
ENSLAFG00000004524	SPEN	95	99.091	ENSCATG00000015079	SPEN	99	98.198	Cercocebus_atys
ENSLAFG00000004524	SPEN	99	81.743	ENSCLAG00000002018	SPEN	100	81.798	Chinchilla_lanigera
ENSLAFG00000004524	SPEN	100	87.347	ENSCSAG00000000841	SPEN	99	87.374	Chlorocebus_sabaeus
ENSLAFG00000004524	SPEN	97	71.818	ENSCPBG00000010477	SPEN	99	71.984	Chrysemys_picta_bellii
ENSLAFG00000004524	SPEN	100	86.224	ENSCANG00000034547	SPEN	99	86.169	Colobus_angolensis_palliatus
ENSLAFG00000004524	SPEN	99	79.668	ENSCGRG00001007725	Spen	99	79.750	Cricetulus_griseus_chok1gshd
ENSLAFG00000004524	SPEN	99	79.231	ENSCGRG00000010581	Spen	100	79.177	Cricetulus_griseus_crigri
ENSLAFG00000004524	SPEN	96	81.046	ENSCSEG00000003915	-	99	45.558	Cynoglossus_semilaevis
ENSLAFG00000004524	SPEN	83	81.319	ENSCVAG00000016346	-	90	47.458	Cyprinodon_variegatus
ENSLAFG00000004524	SPEN	83	85.799	ENSCVAG00000009075	si:ch1073-335m2.2	87	85.799	Cyprinodon_variegatus
ENSLAFG00000004524	SPEN	94	68.273	ENSDARG00000074245	spen	96	75.385	Danio_rerio
ENSLAFG00000004524	SPEN	74	62.651	ENSDARG00000074332	si:ch1073-335m2.2	79	62.651	Danio_rerio
ENSLAFG00000004524	SPEN	100	88.333	ENSDNOG00000041948	SPEN	99	88.115	Dasypus_novemcinctus
ENSLAFG00000004524	SPEN	99	82.720	ENSDORG00000023909	Spen	99	79.117	Dipodomys_ordii
ENSLAFG00000004524	SPEN	68	97.479	ENSETEG00000016692	-	67	97.490	Echinops_telfairi
ENSLAFG00000004524	SPEN	95	99.091	ENSEASG00005015911	SPEN	99	99.091	Equus_asinus_asinus
ENSLAFG00000004524	SPEN	95	99.091	ENSECAG00000008833	SPEN	99	99.091	Equus_caballus
ENSLAFG00000004524	SPEN	71	95.349	ENSEEUG00000010255	SPEN	76	95.349	Erinaceus_europaeus
ENSLAFG00000004524	SPEN	71	81.111	ENSELUG00000007726	si:ch1073-335m2.2	78	81.111	Esox_lucius
ENSLAFG00000004524	SPEN	99	80.660	ENSFDAG00000010212	SPEN	100	80.878	Fukomys_damarensis
ENSLAFG00000004524	SPEN	62	73.913	ENSFHEG00000004544	si:ch1073-335m2.2	60	73.913	Fundulus_heteroclitus
ENSLAFG00000004524	SPEN	80	81.356	ENSGMOG00000008156	si:ch1073-335m2.2	86	81.356	Gadus_morhua
ENSLAFG00000004524	SPEN	83	65.217	ENSGMOG00000008397	-	84	65.217	Gadus_morhua
ENSLAFG00000004524	SPEN	97	43.430	ENSGAFG00000015819	-	90	66.415	Gambusia_affinis
ENSLAFG00000004524	SPEN	97	45.793	ENSGACG00000005341	-	99	45.784	Gasterosteus_aculeatus
ENSLAFG00000004524	SPEN	80	83.951	ENSGACG00000001176	si:ch1073-335m2.2	85	81.437	Gasterosteus_aculeatus
ENSLAFG00000004524	SPEN	96	96.914	ENSGAGG00000020785	SPEN	99	96.914	Gopherus_agassizii
ENSLAFG00000004524	SPEN	100	87.265	ENSGGOG00000012041	SPEN	99	87.293	Gorilla_gorilla
ENSLAFG00000004524	SPEN	94	77.778	ENSHBUG00000020626	-	99	66.532	Haplochromis_burtoni
ENSLAFG00000004524	SPEN	81	85.207	ENSHBUG00000023253	si:ch1073-335m2.2	78	85.207	Haplochromis_burtoni
ENSLAFG00000004524	SPEN	100	80.180	ENSHGLG00000019259	SPEN	99	80.782	Heterocephalus_glaber_female
ENSLAFG00000004524	SPEN	89	84.805	ENSHGLG00100019294	SPEN	95	84.805	Heterocephalus_glaber_male
ENSLAFG00000004524	SPEN	75	67.630	ENSHCOG00000006004	si:ch1073-335m2.2	85	67.630	Hippocampus_comes
ENSLAFG00000004524	SPEN	77	79.290	ENSIPUG00000018212	si:ch1073-335m2.2	79	79.290	Ictalurus_punctatus
ENSLAFG00000004524	SPEN	86	79.355	ENSIPUG00000021668	spen	88	78.481	Ictalurus_punctatus
ENSLAFG00000004524	SPEN	99	85.683	ENSSTOG00000021428	SPEN	100	86.144	Ictidomys_tridecemlineatus
ENSLAFG00000004524	SPEN	100	81.513	ENSJJAG00000010882	Spen	99	81.973	Jaculus_jaculus
ENSLAFG00000004524	SPEN	77	84.024	ENSKMAG00000021725	si:ch1073-335m2.2	51	84.024	Kryptolebias_marmoratus
ENSLAFG00000004524	SPEN	96	77.124	ENSKMAG00000003882	-	98	44.460	Kryptolebias_marmoratus
ENSLAFG00000004524	SPEN	64	80.874	ENSLBEG00000019129	-	79	69.828	Labrus_bergylta
ENSLAFG00000004524	SPEN	83	81.773	ENSLACG00000003258	SPEN	90	81.773	Latimeria_chalumnae
ENSLAFG00000004524	SPEN	97	52.349	ENSLOCG00000007896	si:ch1073-335m2.2	99	53.838	Lepisosteus_oculatus
ENSLAFG00000004524	SPEN	100	87.299	ENSMFAG00000041974	SPEN	99	87.327	Macaca_fascicularis
ENSLAFG00000004524	SPEN	100	87.245	ENSMMUG00000008026	SPEN	99	87.272	Macaca_mulatta
ENSLAFG00000004524	SPEN	100	87.245	ENSMNEG00000042402	SPEN	99	87.272	Macaca_nemestrina
ENSLAFG00000004524	SPEN	99	87.429	ENSMLEG00000039293	SPEN	99	87.456	Mandrillus_leucophaeus
ENSLAFG00000004524	SPEN	77	84.431	ENSMAMG00000023870	si:ch1073-335m2.2	75	84.431	Mastacembelus_armatus
ENSLAFG00000004524	SPEN	81	85.207	ENSMZEG00005011762	si:ch1073-335m2.2	75	85.207	Maylandia_zebra
ENSLAFG00000004524	SPEN	85	65.726	ENSMZEG00005021491	-	98	65.726	Maylandia_zebra
ENSLAFG00000004524	SPEN	98	82.696	ENSMAUG00000008318	Spen	99	78.208	Mesocricetus_auratus
ENSLAFG00000004524	SPEN	100	87.681	ENSMICG00000030994	SPEN	99	87.599	Microcebus_murinus
ENSLAFG00000004524	SPEN	100	79.750	ENSMOCG00000016083	Spen	99	80.266	Microtus_ochrogaster
ENSLAFG00000004524	SPEN	72	80.447	ENSMMOG00000021742	si:ch1073-335m2.2	79	80.447	Mola_mola
ENSLAFG00000004524	SPEN	97	70.937	ENSMODG00000003411	SPEN	99	70.752	Monodelphis_domestica
ENSLAFG00000004524	SPEN	96	78.431	ENSMALG00000008625	-	99	45.876	Monopterus_albus
ENSLAFG00000004524	SPEN	100	78.204	MGP_CAROLIEiJ_G0026745	Spen	99	78.434	Mus_caroli
ENSLAFG00000004524	SPEN	100	77.739	ENSMUSG00000040761	Spen	99	78.143	Mus_musculus
ENSLAFG00000004524	SPEN	100	78.074	MGP_PahariEiJ_G0029076	Spen	99	78.346	Mus_pahari
ENSLAFG00000004524	SPEN	100	77.968	MGP_SPRETEiJ_G0027724	Spen	99	78.279	Mus_spretus
ENSLAFG00000004524	SPEN	99	87.259	ENSMPUG00000016317	SPEN	100	87.176	Mustela_putorius_furo
ENSLAFG00000004524	SPEN	94	87.314	ENSMLUG00000010144	SPEN	98	96.388	Myotis_lucifugus
ENSLAFG00000004524	SPEN	100	77.411	ENSNGAG00000000641	Spen	96	85.770	Nannospalax_galili
ENSLAFG00000004524	SPEN	81	66.935	ENSNBRG00000022090	-	98	66.935	Neolamprologus_brichardi
ENSLAFG00000004524	SPEN	75	85.207	ENSNBRG00000005733	si:ch1073-335m2.2	73	85.207	Neolamprologus_brichardi
ENSLAFG00000004524	SPEN	100	87.032	ENSNLEG00000007652	SPEN	99	87.354	Nomascus_leucogenys
ENSLAFG00000004524	SPEN	87	94.792	ENSMEUG00000002422	SPEN	91	94.792	Notamacropus_eugenii
ENSLAFG00000004524	SPEN	93	88.971	ENSOPRG00000015800	SPEN	93	88.971	Ochotona_princeps
ENSLAFG00000004524	SPEN	99	84.517	ENSODEG00000016644	SPEN	99	79.123	Octodon_degus
ENSLAFG00000004524	SPEN	94	66.532	ENSONIG00000006573	-	99	77.574	Oreochromis_niloticus
ENSLAFG00000004524	SPEN	100	82.085	ENSOCUG00000010840	SPEN	99	82.387	Oryctolagus_cuniculus
ENSLAFG00000004524	SPEN	77	82.249	ENSORLG00000018414	si:ch1073-335m2.2	86	64.730	Oryzias_latipes
ENSLAFG00000004524	SPEN	77	82.249	ENSORLG00020009351	si:ch1073-335m2.2	86	64.730	Oryzias_latipes_hni
ENSLAFG00000004524	SPEN	73	77.157	ENSORLG00020007735	-	99	77.157	Oryzias_latipes_hni
ENSLAFG00000004524	SPEN	85	77.157	ENSORLG00015022085	-	90	77.157	Oryzias_latipes_hsok
ENSLAFG00000004524	SPEN	77	81.657	ENSORLG00015005537	si:ch1073-335m2.2	86	67.265	Oryzias_latipes_hsok
ENSLAFG00000004524	SPEN	79	64.730	ENSOMEG00000004509	si:ch1073-335m2.2	88	66.960	Oryzias_melastigma
ENSLAFG00000004524	SPEN	95	62.548	ENSOMEG00000007639	-	99	62.548	Oryzias_melastigma
ENSLAFG00000004524	SPEN	100	87.238	ENSOGAG00000025110	SPEN	99	87.347	Otolemur_garnettii
ENSLAFG00000004524	SPEN	100	86.732	ENSOARG00000008477	SPEN	99	86.814	Ovis_aries
ENSLAFG00000004524	SPEN	100	87.425	ENSPPAG00000035690	SPEN	100	87.415	Pan_paniscus
ENSLAFG00000004524	SPEN	100	87.398	ENSPTRG00000000210	SPEN	99	87.343	Pan_troglodytes
ENSLAFG00000004524	SPEN	100	86.076	ENSPANG00000006293	SPEN	99	86.103	Papio_anubis
ENSLAFG00000004524	SPEN	97	50.397	ENSPKIG00000010492	si:ch1073-335m2.2	98	61.017	Paramormyrops_kingsleyae
ENSLAFG00000004524	SPEN	84	83.684	ENSPKIG00000002617	SPEN	89	83.684	Paramormyrops_kingsleyae
ENSLAFG00000004524	SPEN	96	70.089	ENSPSIG00000008026	SPEN	100	69.770	Pelodiscus_sinensis
ENSLAFG00000004524	SPEN	99	80.257	ENSPEMG00000022997	Spen	100	80.355	Peromyscus_maniculatus_bairdii
ENSLAFG00000004524	SPEN	66	76.617	ENSPFOG00000017986	si:ch1073-335m2.2	59	76.617	Poecilia_formosa
ENSLAFG00000004524	SPEN	83	76.617	ENSPLAG00000016625	si:ch1073-335m2.2	89	76.617	Poecilia_latipinna
ENSLAFG00000004524	SPEN	83	76.617	ENSPMEG00000002674	si:ch1073-335m2.2	92	76.617	Poecilia_mexicana
ENSLAFG00000004524	SPEN	97	43.663	ENSPMEG00000006764	-	90	66.415	Poecilia_mexicana
ENSLAFG00000004524	SPEN	97	44.098	ENSPREG00000010399	-	90	66.415	Poecilia_reticulata
ENSLAFG00000004524	SPEN	80	84.795	ENSPREG00000005357	si:ch1073-335m2.2	88	84.795	Poecilia_reticulata
ENSLAFG00000004524	SPEN	100	87.527	ENSPPYG00000001834	SPEN	99	87.609	Pongo_abelii
ENSLAFG00000004524	SPEN	90	89.441	ENSPCAG00000009543	SPEN	92	90.000	Procavia_capensis
ENSLAFG00000004524	SPEN	100	86.827	ENSPCOG00000021735	SPEN	99	86.800	Propithecus_coquereli
ENSLAFG00000004524	SPEN	84	93.484	ENSPVAG00000013794	SPEN	83	93.523	Pteropus_vampyrus
ENSLAFG00000004524	SPEN	81	85.207	ENSPNYG00000009042	si:ch1073-335m2.2	75	85.207	Pundamilia_nyererei
ENSLAFG00000004524	SPEN	94	77.778	ENSPNYG00000012379	-	99	66.532	Pundamilia_nyererei
ENSLAFG00000004524	SPEN	81	82.249	ENSPNAG00000011452	si:ch1073-335m2.2	88	82.249	Pygocentrus_nattereri
ENSLAFG00000004524	SPEN	96	80.921	ENSPNAG00000020795	spen	86	71.212	Pygocentrus_nattereri
ENSLAFG00000004524	SPEN	99	78.708	ENSRNOG00000033556	Spen	100	78.708	Rattus_norvegicus
ENSLAFG00000004524	SPEN	100	87.811	ENSRBIG00000039654	SPEN	100	87.681	Rhinopithecus_bieti
ENSLAFG00000004524	SPEN	100	87.476	ENSRROG00000035686	SPEN	100	87.355	Rhinopithecus_roxellana
ENSLAFG00000004524	SPEN	100	84.761	ENSSBOG00000028770	SPEN	99	87.500	Saimiri_boliviensis_boliviensis
ENSLAFG00000004524	SPEN	97	71.375	ENSSHAG00000004960	SPEN	99	93.333	Sarcophilus_harrisii
ENSLAFG00000004524	SPEN	93	89.655	ENSSFOG00015010267	si:ch1073-335m2.2	98	89.655	Scleropages_formosus
ENSLAFG00000004524	SPEN	84	65.741	ENSSFOG00015007131	si:ch1073-335m2.2	96	65.741	Scleropages_formosus
ENSLAFG00000004524	SPEN	82	66.390	ENSSMAG00000000125	si:ch1073-335m2.2	87	66.390	Scophthalmus_maximus
ENSLAFG00000004524	SPEN	97	71.676	ENSSMAG00000008996	-	99	45.477	Scophthalmus_maximus
ENSLAFG00000004524	SPEN	81	84.615	ENSSDUG00000008416	si:ch1073-335m2.2	78	84.615	Seriola_dumerili
ENSLAFG00000004524	SPEN	85	81.967	ENSSDUG00000003476	-	90	68.165	Seriola_dumerili
ENSLAFG00000004524	SPEN	76	84.615	ENSSLDG00000023347	si:ch1073-335m2.2	77	84.615	Seriola_lalandi_dorsalis
ENSLAFG00000004524	SPEN	77	81.967	ENSSLDG00000012950	-	90	68.165	Seriola_lalandi_dorsalis
ENSLAFG00000004524	SPEN	86	96.296	ENSSPUG00000001866	-	100	96.296	Sphenodon_punctatus
ENSLAFG00000004524	SPEN	86	77.778	ENSSPAG00000006014	-	90	67.170	Stegastes_partitus
ENSLAFG00000004524	SPEN	86	87.895	ENSSSCG00000034484	SPEN	99	87.704	Sus_scrofa
ENSLAFG00000004524	SPEN	97	43.011	ENSTRUG00000024350	-	99	44.472	Takifugu_rubripes
ENSLAFG00000004524	SPEN	82	75.508	ENSTNIG00000010907	-	90	74.595	Tetraodon_nigroviridis
ENSLAFG00000004524	SPEN	78	83.432	ENSTNIG00000014666	si:ch1073-335m2.2	76	83.432	Tetraodon_nigroviridis
ENSLAFG00000004524	SPEN	77	93.925	ENSTBEG00000003628	SPEN	77	93.925	Tupaia_belangeri
ENSLAFG00000004524	SPEN	79	94.618	ENSTTRG00000015704	SPEN	79	94.618	Tursiops_truncatus
ENSLAFG00000004524	SPEN	100	88.110	ENSUAMG00000009600	SPEN	99	87.974	Ursus_americanus
ENSLAFG00000004524	SPEN	100	86.875	ENSUMAG00000021641	SPEN	99	87.070	Ursus_maritimus
ENSLAFG00000004524	SPEN	95	99.091	ENSVVUG00000028951	SPEN	99	99.091	Vulpes_vulpes
ENSLAFG00000004524	SPEN	97	56.209	ENSXETG00000023114	SPEN	99	56.366	Xenopus_tropicalis
ENSLAFG00000004524	SPEN	64	83.626	ENSXCOG00000004516	si:ch1073-335m2.2	74	83.626	Xiphophorus_couchianus
ENSLAFG00000004524	SPEN	97	43.713	ENSXMAG00000021384	-	89	64.639	Xiphophorus_maculatus