EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000004891 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 16590 bases
Position: chrscaffold_9:68957257-68973846
Accession: 2325
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000004093	Beta-Casp	PF10996.8	8.1e-21	1	1
ENSLAFP00000004093	Lactamase_B	PF00753.27	7.1e-07	1	1
ENSLAFP00000004093	RMMBL	PF07521.12	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000004891	CPSF2-201	2355	-	ENSLAFP00000004093	784 (aa)	-	G3SV49

Gene Model

Click here to download ENSLAFG00000004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000004891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000004891	CPSF2	100	99.490	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSLAFG00000004891	CPSF2	100	85.588	ENSAPOG00000001242	cpsf2	100	85.588	Acanthochromis_polyacanthus
ENSLAFG00000004891	CPSF2	100	85.732	ENSACIG00000009331	cpsf2	100	85.732	Amphilophus_citrinellus
ENSLAFG00000004891	CPSF2	100	85.714	ENSAOCG00000014095	cpsf2	100	85.714	Amphiprion_ocellaris
ENSLAFG00000004891	CPSF2	100	85.714	ENSAPEG00000009158	cpsf2	100	85.714	Amphiprion_percula
ENSLAFG00000004891	CPSF2	96	85.696	ENSATEG00000017644	cpsf2	100	83.973	Anabas_testudineus
ENSLAFG00000004891	CPSF2	100	96.056	ENSAPLG00000006330	CPSF2	100	96.056	Anas_platyrhynchos
ENSLAFG00000004891	CPSF2	100	95.159	ENSACAG00000009245	CPSF2	100	95.159	Anolis_carolinensis
ENSLAFG00000004891	CPSF2	100	99.235	ENSANAG00000022915	CPSF2	100	99.235	Aotus_nancymaae
ENSLAFG00000004891	CPSF2	100	85.551	ENSAMXG00000018696	cpsf2	100	85.551	Astyanax_mexicanus
ENSLAFG00000004891	CPSF2	100	99.235	ENSBTAG00000010227	CPSF2	100	99.235	Bos_taurus
ENSLAFG00000004891	CPSF2	100	41.355	WBGene00017313	cpsf-2	100	40.819	Caenorhabditis_elegans
ENSLAFG00000004891	CPSF2	100	99.235	ENSCJAG00000018069	CPSF2	100	99.235	Callithrix_jacchus
ENSLAFG00000004891	CPSF2	100	99.362	ENSCAFG00000010909	CPSF2	100	99.362	Canis_familiaris
ENSLAFG00000004891	CPSF2	100	99.362	ENSCAFG00020020670	CPSF2	100	99.362	Canis_lupus_dingo
ENSLAFG00000004891	CPSF2	100	99.235	ENSCHIG00000023848	CPSF2	100	99.235	Capra_hircus
ENSLAFG00000004891	CPSF2	100	98.087	ENSTSYG00000009036	CPSF2	100	98.087	Carlito_syrichta
ENSLAFG00000004891	CPSF2	100	99.490	ENSCPOG00000010899	CPSF2	100	99.490	Cavia_porcellus
ENSLAFG00000004891	CPSF2	100	99.235	ENSCCAG00000028088	CPSF2	100	99.235	Cebus_capucinus
ENSLAFG00000004891	CPSF2	100	99.362	ENSCATG00000030132	CPSF2	100	99.362	Cercocebus_atys
ENSLAFG00000004891	CPSF2	100	99.362	ENSCLAG00000012404	CPSF2	100	99.362	Chinchilla_lanigera
ENSLAFG00000004891	CPSF2	100	99.362	ENSCSAG00000011300	CPSF2	100	99.362	Chlorocebus_sabaeus
ENSLAFG00000004891	CPSF2	100	92.219	ENSCHOG00000012904	CPSF2	100	92.219	Choloepus_hoffmanni
ENSLAFG00000004891	CPSF2	100	96.178	ENSCPBG00000008766	CPSF2	97	96.178	Chrysemys_picta_bellii
ENSLAFG00000004891	CPSF2	100	54.863	ENSCING00000007881	-	100	54.489	Ciona_intestinalis
ENSLAFG00000004891	CPSF2	94	99.319	ENSCANG00000041651	CPSF2	100	99.319	Colobus_angolensis_palliatus
ENSLAFG00000004891	CPSF2	100	98.214	ENSCGRG00001006901	Cpsf2	100	98.214	Cricetulus_griseus_chok1gshd
ENSLAFG00000004891	CPSF2	100	98.214	ENSCGRG00000012416	Cpsf2	100	98.214	Cricetulus_griseus_crigri
ENSLAFG00000004891	CPSF2	100	83.565	ENSCSEG00000004116	cpsf2	100	83.565	Cynoglossus_semilaevis
ENSLAFG00000004891	CPSF2	100	84.703	ENSCVAG00000000095	cpsf2	100	84.829	Cyprinodon_variegatus
ENSLAFG00000004891	CPSF2	100	85.516	ENSDARG00000028971	cpsf2	100	85.516	Danio_rerio
ENSLAFG00000004891	CPSF2	100	99.235	ENSDNOG00000042757	CPSF2	100	99.235	Dasypus_novemcinctus
ENSLAFG00000004891	CPSF2	100	99.107	ENSDORG00000013709	Cpsf2	100	99.107	Dipodomys_ordii
ENSLAFG00000004891	CPSF2	100	53.913	FBgn0027873	Cpsf100	100	53.798	Drosophila_melanogaster
ENSLAFG00000004891	CPSF2	100	90.191	ENSETEG00000012123	CPSF2	100	90.191	Echinops_telfairi
ENSLAFG00000004891	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSLAFG00000004891	CPSF2	91	96.949	ENSEASG00005021193	CPSF2	100	96.949	Equus_asinus_asinus
ENSLAFG00000004891	CPSF2	100	99.235	ENSECAG00000023935	CPSF2	100	99.235	Equus_caballus
ENSLAFG00000004891	CPSF2	100	83.730	ENSELUG00000008442	cpsf2	100	83.730	Esox_lucius
ENSLAFG00000004891	CPSF2	100	99.235	ENSFCAG00000007886	CPSF2	100	99.235	Felis_catus
ENSLAFG00000004891	CPSF2	100	96.051	ENSFALG00000002412	CPSF2	100	96.051	Ficedula_albicollis
ENSLAFG00000004891	CPSF2	100	99.362	ENSFDAG00000006327	CPSF2	100	99.362	Fukomys_damarensis
ENSLAFG00000004891	CPSF2	96	84.355	ENSFHEG00000015465	cpsf2	98	84.876	Fundulus_heteroclitus
ENSLAFG00000004891	CPSF2	100	83.375	ENSGMOG00000008761	cpsf2	100	83.375	Gadus_morhua
ENSLAFG00000004891	CPSF2	100	95.796	ENSGALG00000010783	CPSF2	100	95.796	Gallus_gallus
ENSLAFG00000004891	CPSF2	100	84.956	ENSGAFG00000001407	cpsf2	100	84.956	Gambusia_affinis
ENSLAFG00000004891	CPSF2	100	84.324	ENSGACG00000008418	cpsf2	100	84.324	Gasterosteus_aculeatus
ENSLAFG00000004891	CPSF2	100	96.306	ENSGAGG00000008287	CPSF2	100	96.306	Gopherus_agassizii
ENSLAFG00000004891	CPSF2	100	99.490	ENSGGOG00000011799	CPSF2	100	99.490	Gorilla_gorilla
ENSLAFG00000004891	CPSF2	100	84.956	ENSHBUG00000023466	cpsf2	100	84.956	Haplochromis_burtoni
ENSLAFG00000004891	CPSF2	100	99.235	ENSHGLG00000018311	CPSF2	100	99.235	Heterocephalus_glaber_female
ENSLAFG00000004891	CPSF2	100	99.235	ENSHGLG00100016460	CPSF2	100	99.235	Heterocephalus_glaber_male
ENSLAFG00000004891	CPSF2	100	84.324	ENSHCOG00000019527	cpsf2	98	84.324	Hippocampus_comes
ENSLAFG00000004891	CPSF2	100	85.425	ENSIPUG00000020857	cpsf2	100	85.425	Ictalurus_punctatus
ENSLAFG00000004891	CPSF2	100	99.362	ENSSTOG00000009528	CPSF2	100	99.362	Ictidomys_tridecemlineatus
ENSLAFG00000004891	CPSF2	100	98.980	ENSJJAG00000017925	Cpsf2	100	98.980	Jaculus_jaculus
ENSLAFG00000004891	CPSF2	100	84.197	ENSKMAG00000019429	cpsf2	100	84.197	Kryptolebias_marmoratus
ENSLAFG00000004891	CPSF2	95	84.133	ENSLBEG00000011585	cpsf2	100	84.267	Labrus_bergylta
ENSLAFG00000004891	CPSF2	100	89.427	ENSLACG00000019024	CPSF2	100	89.682	Latimeria_chalumnae
ENSLAFG00000004891	CPSF2	100	87.358	ENSLOCG00000014102	cpsf2	100	87.358	Lepisosteus_oculatus
ENSLAFG00000004891	CPSF2	100	99.362	ENSMFAG00000041212	CPSF2	100	99.362	Macaca_fascicularis
ENSLAFG00000004891	CPSF2	100	99.362	ENSMMUG00000000699	CPSF2	100	99.362	Macaca_mulatta
ENSLAFG00000004891	CPSF2	100	99.362	ENSMNEG00000031584	CPSF2	100	99.362	Macaca_nemestrina
ENSLAFG00000004891	CPSF2	100	99.362	ENSMLEG00000029394	CPSF2	100	99.362	Mandrillus_leucophaeus
ENSLAFG00000004891	CPSF2	100	85.588	ENSMAMG00000004235	cpsf2	100	85.588	Mastacembelus_armatus
ENSLAFG00000004891	CPSF2	100	85.082	ENSMZEG00005001769	cpsf2	100	85.082	Maylandia_zebra
ENSLAFG00000004891	CPSF2	100	96.051	ENSMGAG00000013122	CPSF2	100	96.051	Meleagris_gallopavo
ENSLAFG00000004891	CPSF2	100	98.214	ENSMAUG00000015160	Cpsf2	100	98.214	Mesocricetus_auratus
ENSLAFG00000004891	CPSF2	100	99.235	ENSMICG00000016441	CPSF2	100	99.235	Microcebus_murinus
ENSLAFG00000004891	CPSF2	100	98.214	ENSMOCG00000015372	Cpsf2	100	98.214	Microtus_ochrogaster
ENSLAFG00000004891	CPSF2	100	80.910	ENSMMOG00000015590	cpsf2	100	80.910	Mola_mola
ENSLAFG00000004891	CPSF2	100	98.597	ENSMODG00000002042	CPSF2	100	98.597	Monodelphis_domestica
ENSLAFG00000004891	CPSF2	100	82.554	ENSMALG00000022275	cpsf2	100	82.554	Monopterus_albus
ENSLAFG00000004891	CPSF2	100	97.704	ENSMUSG00000041781	Cpsf2	100	97.704	Mus_musculus
ENSLAFG00000004891	CPSF2	100	97.959	MGP_PahariEiJ_G0029791	Cpsf2	100	97.959	Mus_pahari
ENSLAFG00000004891	CPSF2	100	97.704	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.704	Mus_spretus
ENSLAFG00000004891	CPSF2	100	99.362	ENSMPUG00000007617	CPSF2	98	99.362	Mustela_putorius_furo
ENSLAFG00000004891	CPSF2	100	98.597	ENSMLUG00000005570	CPSF2	100	98.597	Myotis_lucifugus
ENSLAFG00000004891	CPSF2	100	98.724	ENSNGAG00000020312	Cpsf2	100	98.724	Nannospalax_galili
ENSLAFG00000004891	CPSF2	100	85.461	ENSNBRG00000022402	cpsf2	100	85.461	Neolamprologus_brichardi
ENSLAFG00000004891	CPSF2	100	98.597	ENSNLEG00000017132	CPSF2	100	98.597	Nomascus_leucogenys
ENSLAFG00000004891	CPSF2	91	99.035	ENSMEUG00000008138	CPSF2	91	99.035	Notamacropus_eugenii
ENSLAFG00000004891	CPSF2	94	91.553	ENSOPRG00000008484	-	100	91.553	Ochotona_princeps
ENSLAFG00000004891	CPSF2	100	99.107	ENSODEG00000008682	CPSF2	100	99.107	Octodon_degus
ENSLAFG00000004891	CPSF2	100	85.841	ENSONIG00000005901	cpsf2	100	85.841	Oreochromis_niloticus
ENSLAFG00000004891	CPSF2	100	98.214	ENSOANG00000003822	CPSF2	100	98.214	Ornithorhynchus_anatinus
ENSLAFG00000004891	CPSF2	100	98.980	ENSOCUG00000005713	CPSF2	100	98.980	Oryctolagus_cuniculus
ENSLAFG00000004891	CPSF2	100	79.899	ENSORLG00000011628	cpsf2	100	79.899	Oryzias_latipes
ENSLAFG00000004891	CPSF2	100	84.703	ENSORLG00020016980	cpsf2	100	84.703	Oryzias_latipes_hni
ENSLAFG00000004891	CPSF2	100	84.703	ENSORLG00015011910	cpsf2	100	84.703	Oryzias_latipes_hsok
ENSLAFG00000004891	CPSF2	100	83.818	ENSOMEG00000022876	cpsf2	100	83.818	Oryzias_melastigma
ENSLAFG00000004891	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSLAFG00000004891	CPSF2	100	99.490	ENSPPAG00000039666	CPSF2	100	99.490	Pan_paniscus
ENSLAFG00000004891	CPSF2	99	99.234	ENSPPRG00000010869	CPSF2	100	99.234	Panthera_pardus
ENSLAFG00000004891	CPSF2	100	99.235	ENSPTIG00000021202	CPSF2	100	99.235	Panthera_tigris_altaica
ENSLAFG00000004891	CPSF2	100	99.490	ENSPTRG00000006651	CPSF2	100	99.490	Pan_troglodytes
ENSLAFG00000004891	CPSF2	100	99.362	ENSPANG00000017417	CPSF2	100	99.362	Papio_anubis
ENSLAFG00000004891	CPSF2	100	81.876	ENSPKIG00000021453	cpsf2	100	81.876	Paramormyrops_kingsleyae
ENSLAFG00000004891	CPSF2	100	95.669	ENSPSIG00000006289	CPSF2	100	95.669	Pelodiscus_sinensis
ENSLAFG00000004891	CPSF2	76	79.568	ENSPMGG00000002511	cpsf2	100	79.734	Periophthalmus_magnuspinnatus
ENSLAFG00000004891	CPSF2	100	98.469	ENSPEMG00000007917	Cpsf2	100	98.469	Peromyscus_maniculatus_bairdii
ENSLAFG00000004891	CPSF2	100	74.149	ENSPMAG00000006205	cpsf2	100	74.149	Petromyzon_marinus
ENSLAFG00000004891	CPSF2	100	98.597	ENSPCIG00000011393	CPSF2	100	98.597	Phascolarctos_cinereus
ENSLAFG00000004891	CPSF2	100	84.829	ENSPFOG00000018648	cpsf2	100	84.829	Poecilia_formosa
ENSLAFG00000004891	CPSF2	100	84.829	ENSPLAG00000019199	cpsf2	99	84.829	Poecilia_latipinna
ENSLAFG00000004891	CPSF2	96	85.171	ENSPMEG00000012100	cpsf2	100	84.533	Poecilia_mexicana
ENSLAFG00000004891	CPSF2	100	84.956	ENSPREG00000008960	cpsf2	100	84.956	Poecilia_reticulata
ENSLAFG00000004891	CPSF2	63	99.597	ENSPPYG00000029685	-	100	99.597	Pongo_abelii
ENSLAFG00000004891	CPSF2	100	99.362	ENSPCAG00000012477	CPSF2	100	99.362	Procavia_capensis
ENSLAFG00000004891	CPSF2	100	99.235	ENSPCOG00000026387	CPSF2	100	99.235	Propithecus_coquereli
ENSLAFG00000004891	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSLAFG00000004891	CPSF2	100	85.101	ENSPNYG00000023356	cpsf2	100	85.101	Pundamilia_nyererei
ENSLAFG00000004891	CPSF2	100	86.565	ENSPNAG00000001849	cpsf2	100	86.565	Pygocentrus_nattereri
ENSLAFG00000004891	CPSF2	100	98.087	ENSRNOG00000005733	Cpsf2	100	98.087	Rattus_norvegicus
ENSLAFG00000004891	CPSF2	100	99.362	ENSRBIG00000044792	CPSF2	100	99.362	Rhinopithecus_bieti
ENSLAFG00000004891	CPSF2	100	99.362	ENSRROG00000034875	CPSF2	100	99.362	Rhinopithecus_roxellana
ENSLAFG00000004891	CPSF2	100	99.235	ENSSBOG00000024571	CPSF2	100	99.235	Saimiri_boliviensis_boliviensis
ENSLAFG00000004891	CPSF2	100	98.724	ENSSHAG00000010458	CPSF2	100	98.724	Sarcophilus_harrisii
ENSLAFG00000004891	CPSF2	100	87.199	ENSSFOG00015002117	cpsf2	100	87.199	Scleropages_formosus
ENSLAFG00000004891	CPSF2	100	83.818	ENSSMAG00000002001	cpsf2	100	83.818	Scophthalmus_maximus
ENSLAFG00000004891	CPSF2	100	85.967	ENSSDUG00000004084	cpsf2	100	85.967	Seriola_dumerili
ENSLAFG00000004891	CPSF2	100	85.461	ENSSLDG00000024330	cpsf2	100	85.461	Seriola_lalandi_dorsalis
ENSLAFG00000004891	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSLAFG00000004891	CPSF2	100	95.541	ENSSPUG00000013485	CPSF2	100	95.541	Sphenodon_punctatus
ENSLAFG00000004891	CPSF2	100	84.956	ENSSPAG00000013284	cpsf2	100	84.956	Stegastes_partitus
ENSLAFG00000004891	CPSF2	100	99.235	ENSSSCG00000002447	CPSF2	100	99.235	Sus_scrofa
ENSLAFG00000004891	CPSF2	100	96.178	ENSTGUG00000012571	-	100	96.178	Taeniopygia_guttata
ENSLAFG00000004891	CPSF2	100	84.576	ENSTRUG00000003742	cpsf2	100	84.576	Takifugu_rubripes
ENSLAFG00000004891	CPSF2	100	83.480	ENSTNIG00000012228	cpsf2	100	84.237	Tetraodon_nigroviridis
ENSLAFG00000004891	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSLAFG00000004891	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSLAFG00000004891	CPSF2	100	99.490	ENSUAMG00000028071	CPSF2	100	99.490	Ursus_americanus
ENSLAFG00000004891	CPSF2	100	99.490	ENSUMAG00000005029	CPSF2	100	99.490	Ursus_maritimus
ENSLAFG00000004891	CPSF2	99	99.361	ENSVPAG00000003503	CPSF2	100	99.361	Vicugna_pacos
ENSLAFG00000004891	CPSF2	100	99.362	ENSVVUG00000024642	CPSF2	100	99.362	Vulpes_vulpes
ENSLAFG00000004891	CPSF2	100	91.847	ENSXETG00000010289	cpsf2	100	91.847	Xenopus_tropicalis
ENSLAFG00000004891	CPSF2	100	85.209	ENSXCOG00000001764	cpsf2	100	85.209	Xiphophorus_couchianus
ENSLAFG00000004891	CPSF2	100	85.335	ENSXMAG00000017048	cpsf2	100	85.335	Xiphophorus_maculatus