EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000005117 (Gene tree)
Gene ID: -
Gene Symbol: SNAI3
Alias: -
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 10326 bases
Position: chrscaffold_57:4508750-4519075
Accession: 100675226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024221	zf-C2H2	PF00096.26	3.2e-24	1	4
ENSLAFP00000024221	zf-C2H2	PF00096.26	3.2e-24	2	4
ENSLAFP00000024221	zf-C2H2	PF00096.26	3.2e-24	3	4
ENSLAFP00000024221	zf-C2H2	PF00096.26	3.2e-24	4	4
ENSLAFP00000004282	zf-C2H2	PF00096.26	5.3e-24	1	4
ENSLAFP00000004282	zf-C2H2	PF00096.26	5.3e-24	2	4
ENSLAFP00000004282	zf-C2H2	PF00096.26	5.3e-24	3	4
ENSLAFP00000004282	zf-C2H2	PF00096.26	5.3e-24	4	4
ENSLAFP00000024221	zf-met	PF12874.7	1.1e-09	1	2
ENSLAFP00000024221	zf-met	PF12874.7	1.1e-09	2	2
ENSLAFP00000004282	zf-met	PF12874.7	1.3e-09	1	2
ENSLAFP00000004282	zf-met	PF12874.7	1.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000025464	SNAI3-201	813	-	ENSLAFP00000024221	270 (aa)	-	G3U8R3
ENSLAFT00000005115	SNAI3-202	873	-	ENSLAFP00000004282	291 (aa)	XP_003418107	G3SVK9

Gene Model

Click here to download ENSLAFG00000005117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000005117	SNAI3	56	41.748	ENSLAFG00000007752	-	92	41.748
ENSLAFG00000005117	SNAI3	83	44.737	ENSLAFG00000002266	ZNF319	78	38.462
ENSLAFG00000005117	SNAI3	63	39.048	ENSLAFG00000022960	ZFP64	66	40.625
ENSLAFG00000005117	SNAI3	50	36.986	ENSLAFG00000008686	-	79	36.697
ENSLAFG00000005117	SNAI3	50	39.552	ENSLAFG00000006959	ZNF2	59	40.909
ENSLAFG00000005117	SNAI3	56	40.506	ENSLAFG00000003125	ZFP1	58	40.506
ENSLAFG00000005117	SNAI3	73	37.864	ENSLAFG00000013445	ZNF521	94	37.864
ENSLAFG00000005117	SNAI3	73	40.777	ENSLAFG00000022529	ZNF628	100	35.838
ENSLAFG00000005117	SNAI3	63	37.662	ENSLAFG00000032716	-	99	36.036
ENSLAFG00000005117	SNAI3	61	38.519	ENSLAFG00000022290	ZNF668	86	38.519
ENSLAFG00000005117	SNAI3	50	42.857	ENSLAFG00000002909	-	80	42.857
ENSLAFG00000005117	SNAI3	51	35.766	ENSLAFG00000022367	GFI1B	52	35.766
ENSLAFG00000005117	SNAI3	57	36.047	ENSLAFG00000030700	ZNF865	96	39.241
ENSLAFG00000005117	SNAI3	51	33.962	ENSLAFG00000010205	ZFAT	58	33.636
ENSLAFG00000005117	SNAI3	78	37.778	ENSLAFG00000011186	ZNF235	74	37.778
ENSLAFG00000005117	SNAI3	50	40.299	ENSLAFG00000011022	ZFP69B	58	40.299
ENSLAFG00000005117	SNAI3	55	36.036	ENSLAFG00000032306	-	65	36.036
ENSLAFG00000005117	SNAI3	95	44.304	ENSLAFG00000031653	-	100	44.156
ENSLAFG00000005117	SNAI3	63	37.778	ENSLAFG00000006532	PRDM5	98	40.187
ENSLAFG00000005117	SNAI3	56	40.299	ENSLAFG00000002806	ZNF317	64	40.909
ENSLAFG00000005117	SNAI3	99	57.565	ENSLAFG00000009299	SNAI2	99	57.565
ENSLAFG00000005117	SNAI3	51	38.182	ENSLAFG00000000308	ZNF574	53	38.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005117	SNAI3	100	72.260	ENSG00000185669	SNAI3	100	72.260	Homo_sapiens
ENSLAFG00000005117	SNAI3	99	56.827	ENSG00000019549	SNAI2	99	56.827	Homo_sapiens
ENSLAFG00000005117	SNAI3	99	57.934	ENSAMEG00000009606	SNAI2	99	57.934	Ailuropoda_melanoleuca
ENSLAFG00000005117	SNAI3	100	72.260	ENSANAG00000032748	SNAI3	100	72.260	Aotus_nancymaae
ENSLAFG00000005117	SNAI3	99	56.827	ENSANAG00000021163	SNAI2	99	56.827	Aotus_nancymaae
ENSLAFG00000005117	SNAI3	99	70.103	ENSBTAG00000017528	SNAI3	99	70.103	Bos_taurus
ENSLAFG00000005117	SNAI3	99	57.565	ENSBTAG00000013227	SNAI2	99	57.565	Bos_taurus
ENSLAFG00000005117	SNAI3	99	56.827	ENSCJAG00000013499	SNAI2	99	56.827	Callithrix_jacchus
ENSLAFG00000005117	SNAI3	100	72.852	ENSCAFG00000029458	SNAI3	100	72.852	Canis_familiaris
ENSLAFG00000005117	SNAI3	99	58.303	ENSCAFG00000006638	SNAI2	99	58.303	Canis_familiaris
ENSLAFG00000005117	SNAI3	99	58.303	ENSCAFG00020015384	SNAI2	99	58.303	Canis_lupus_dingo
ENSLAFG00000005117	SNAI3	100	73.196	ENSCAFG00020004719	SNAI3	100	73.196	Canis_lupus_dingo
ENSLAFG00000005117	SNAI3	99	57.934	ENSCHIG00000024410	SNAI2	99	57.934	Capra_hircus
ENSLAFG00000005117	SNAI3	99	69.416	ENSCHIG00000018087	SNAI3	99	69.416	Capra_hircus
ENSLAFG00000005117	SNAI3	88	58.091	ENSTSYG00000030892	SNAI2	88	58.091	Carlito_syrichta
ENSLAFG00000005117	SNAI3	91	70.943	ENSTSYG00000025594	SNAI3	91	70.943	Carlito_syrichta
ENSLAFG00000005117	SNAI3	81	60.633	ENSCAPG00000013078	SNAI2	97	60.633	Cavia_aperea
ENSLAFG00000005117	SNAI3	99	56.827	ENSCCAG00000024100	SNAI2	99	56.827	Cebus_capucinus
ENSLAFG00000005117	SNAI3	99	56.827	ENSCATG00000028656	SNAI2	99	56.827	Cercocebus_atys
ENSLAFG00000005117	SNAI3	100	72.603	ENSCATG00000031714	SNAI3	100	72.603	Cercocebus_atys
ENSLAFG00000005117	SNAI3	99	57.196	ENSCLAG00000011797	SNAI2	99	57.196	Chinchilla_lanigera
ENSLAFG00000005117	SNAI3	99	56.827	ENSCSAG00000014787	SNAI2	99	56.827	Chlorocebus_sabaeus
ENSLAFG00000005117	SNAI3	100	68.151	ENSCSAG00000003047	SNAI3	100	68.151	Chlorocebus_sabaeus
ENSLAFG00000005117	SNAI3	99	57.565	ENSCPBG00000020255	SNAI2	99	57.565	Chrysemys_picta_bellii
ENSLAFG00000005117	SNAI3	99	62.081	ENSCPBG00000023474	SNAI3	99	62.081	Chrysemys_picta_bellii
ENSLAFG00000005117	SNAI3	99	56.827	ENSCANG00000029656	SNAI2	99	56.827	Colobus_angolensis_palliatus
ENSLAFG00000005117	SNAI3	93	71.587	ENSCANG00000031124	SNAI3	83	71.587	Colobus_angolensis_palliatus
ENSLAFG00000005117	SNAI3	99	57.196	ENSCGRG00001013674	Snai2	99	57.196	Cricetulus_griseus_chok1gshd
ENSLAFG00000005117	SNAI3	100	66.096	ENSCGRG00001011389	Snai3	100	65.753	Cricetulus_griseus_chok1gshd
ENSLAFG00000005117	SNAI3	100	66.096	ENSCGRG00000014932	Snai3	100	65.753	Cricetulus_griseus_crigri
ENSLAFG00000005117	SNAI3	99	57.196	ENSCGRG00000012119	Snai2	99	57.196	Cricetulus_griseus_crigri
ENSLAFG00000005117	SNAI3	80	54.506	ENSDNOG00000035204	-	100	54.622	Dasypus_novemcinctus
ENSLAFG00000005117	SNAI3	99	55.720	ENSDORG00000029620	Snai2	99	55.720	Dipodomys_ordii
ENSLAFG00000005117	SNAI3	91	72.830	ENSEASG00005000614	SNAI3	87	72.830	Equus_asinus_asinus
ENSLAFG00000005117	SNAI3	99	73.793	ENSECAG00000012131	SNAI3	99	73.793	Equus_caballus
ENSLAFG00000005117	SNAI3	100	63.574	ENSEEUG00000000841	SNAI3	100	62.887	Erinaceus_europaeus
ENSLAFG00000005117	SNAI3	99	52.508	ENSELUG00000018742	-	99	51.971	Esox_lucius
ENSLAFG00000005117	SNAI3	99	55.224	ENSELUG00000021795	SNAI2	78	56.089	Esox_lucius
ENSLAFG00000005117	SNAI3	100	67.010	ENSFCAG00000043885	SNAI3	100	67.010	Felis_catus
ENSLAFG00000005117	SNAI3	51	75.912	ENSFALG00000012974	-	71	68.519	Ficedula_albicollis
ENSLAFG00000005117	SNAI3	99	57.196	ENSFDAG00000016958	SNAI2	99	57.196	Fukomys_damarensis
ENSLAFG00000005117	SNAI3	99	57.565	ENSGAGG00000000426	SNAI2	99	57.565	Gopherus_agassizii
ENSLAFG00000005117	SNAI3	99	61.224	ENSGAGG00000023571	SNAI3	99	61.224	Gopherus_agassizii
ENSLAFG00000005117	SNAI3	100	72.603	ENSGGOG00000012559	SNAI3	100	72.603	Gorilla_gorilla
ENSLAFG00000005117	SNAI3	99	56.827	ENSGGOG00000000959	SNAI2	99	56.827	Gorilla_gorilla
ENSLAFG00000005117	SNAI3	99	53.160	ENSHCOG00000019435	SNAI2	99	54.647	Hippocampus_comes
ENSLAFG00000005117	SNAI3	99	52.899	ENSIPUG00000000131	snai2	99	53.623	Ictalurus_punctatus
ENSLAFG00000005117	SNAI3	99	57.196	ENSSTOG00000028743	SNAI2	99	57.196	Ictidomys_tridecemlineatus
ENSLAFG00000005117	SNAI3	100	69.048	ENSJJAG00000019934	Snai3	100	69.048	Jaculus_jaculus
ENSLAFG00000005117	SNAI3	51	79.856	ENSLOCG00000004887	SNAI3	98	71.605	Lepisosteus_oculatus
ENSLAFG00000005117	SNAI3	99	54.613	ENSLOCG00000005992	SNAI2	99	54.613	Lepisosteus_oculatus
ENSLAFG00000005117	SNAI3	100	73.973	ENSMFAG00000032064	SNAI3	100	73.973	Macaca_fascicularis
ENSLAFG00000005117	SNAI3	99	56.827	ENSMFAG00000046061	SNAI2	99	56.827	Macaca_fascicularis
ENSLAFG00000005117	SNAI3	100	73.973	ENSMMUG00000008716	SNAI3	100	73.973	Macaca_mulatta
ENSLAFG00000005117	SNAI3	99	56.827	ENSMMUG00000016195	SNAI2	99	56.827	Macaca_mulatta
ENSLAFG00000005117	SNAI3	99	56.827	ENSMNEG00000034216	SNAI2	99	56.827	Macaca_nemestrina
ENSLAFG00000005117	SNAI3	100	73.973	ENSMNEG00000045515	SNAI3	100	73.973	Macaca_nemestrina
ENSLAFG00000005117	SNAI3	99	56.827	ENSMLEG00000034407	SNAI2	99	56.827	Mandrillus_leucophaeus
ENSLAFG00000005117	SNAI3	93	70.849	ENSMLEG00000033191	SNAI3	92	71.111	Mandrillus_leucophaeus
ENSLAFG00000005117	SNAI3	99	56.827	ENSMAUG00000008119	Snai2	99	56.827	Mesocricetus_auratus
ENSLAFG00000005117	SNAI3	100	66.781	ENSMAUG00000001685	Snai3	100	65.411	Mesocricetus_auratus
ENSLAFG00000005117	SNAI3	99	56.827	ENSMOCG00000006622	Snai2	99	56.827	Microtus_ochrogaster
ENSLAFG00000005117	SNAI3	100	68.493	ENSMOCG00000003536	Snai3	100	67.466	Microtus_ochrogaster
ENSLAFG00000005117	SNAI3	99	56.827	ENSMODG00000010173	SNAI2	99	56.827	Monodelphis_domestica
ENSLAFG00000005117	SNAI3	99	56.985	MGP_CAROLIEiJ_G0020483	Snai2	99	56.985	Mus_caroli
ENSLAFG00000005117	SNAI3	100	66.096	MGP_CAROLIEiJ_G0031662	Snai3	100	64.726	Mus_caroli
ENSLAFG00000005117	SNAI3	99	56.985	ENSMUSG00000022676	Snai2	99	56.985	Mus_musculus
ENSLAFG00000005117	SNAI3	100	67.466	ENSMUSG00000006587	Snai3	100	66.096	Mus_musculus
ENSLAFG00000005117	SNAI3	99	56.985	MGP_PahariEiJ_G0016188	Snai2	99	56.985	Mus_pahari
ENSLAFG00000005117	SNAI3	100	65.529	MGP_PahariEiJ_G0023260	Snai3	100	64.164	Mus_pahari
ENSLAFG00000005117	SNAI3	100	67.466	MGP_SPRETEiJ_G0032780	Snai3	100	66.096	Mus_spretus
ENSLAFG00000005117	SNAI3	99	56.985	MGP_SPRETEiJ_G0021379	Snai2	99	56.985	Mus_spretus
ENSLAFG00000005117	SNAI3	99	57.934	ENSMPUG00000010793	SNAI2	99	57.934	Mustela_putorius_furo
ENSLAFG00000005117	SNAI3	100	68.729	ENSMPUG00000008104	SNAI3	100	68.729	Mustela_putorius_furo
ENSLAFG00000005117	SNAI3	99	56.827	ENSMLUG00000001086	SNAI2	99	56.827	Myotis_lucifugus
ENSLAFG00000005117	SNAI3	100	67.808	ENSNGAG00000023039	Snai3	100	67.808	Nannospalax_galili
ENSLAFG00000005117	SNAI3	100	73.630	ENSNLEG00000000595	SNAI3	100	73.630	Nomascus_leucogenys
ENSLAFG00000005117	SNAI3	99	57.565	ENSNLEG00000013421	SNAI2	99	57.565	Nomascus_leucogenys
ENSLAFG00000005117	SNAI3	97	56.929	ENSMEUG00000009510	SNAI2	100	56.929	Notamacropus_eugenii
ENSLAFG00000005117	SNAI3	99	57.196	ENSOANG00000007267	SNAI2	99	57.196	Ornithorhynchus_anatinus
ENSLAFG00000005117	SNAI3	100	71.233	ENSOGAG00000000419	SNAI3	100	72.603	Otolemur_garnettii
ENSLAFG00000005117	SNAI3	90	52.222	ENSOARG00000013069	-	99	52.222	Ovis_aries
ENSLAFG00000005117	SNAI3	99	57.934	ENSOARG00000013030	SNAI2	99	57.934	Ovis_aries
ENSLAFG00000005117	SNAI3	100	72.603	ENSPPAG00000043301	SNAI3	100	72.603	Pan_paniscus
ENSLAFG00000005117	SNAI3	99	56.827	ENSPPAG00000015662	SNAI2	99	56.827	Pan_paniscus
ENSLAFG00000005117	SNAI3	99	57.934	ENSPPRG00000012562	-	99	57.934	Panthera_pardus
ENSLAFG00000005117	SNAI3	99	67.596	ENSPPRG00000008511	SNAI3	99	67.596	Panthera_pardus
ENSLAFG00000005117	SNAI3	90	57.490	ENSPTIG00000007593	SNAI2	77	57.490	Panthera_tigris_altaica
ENSLAFG00000005117	SNAI3	100	72.603	ENSPTRG00000008460	SNAI3	100	72.603	Pan_troglodytes
ENSLAFG00000005117	SNAI3	99	56.827	ENSPTRG00000020235	SNAI2	99	56.827	Pan_troglodytes
ENSLAFG00000005117	SNAI3	100	73.288	ENSPANG00000000509	SNAI3	100	73.288	Papio_anubis
ENSLAFG00000005117	SNAI3	99	56.827	ENSPANG00000017540	SNAI2	99	56.827	Papio_anubis
ENSLAFG00000005117	SNAI3	99	51.525	ENSPKIG00000007872	SNAI3	99	51.525	Paramormyrops_kingsleyae
ENSLAFG00000005117	SNAI3	99	55.720	ENSPKIG00000002254	SNAI2	99	55.720	Paramormyrops_kingsleyae
ENSLAFG00000005117	SNAI3	99	57.565	ENSPSIG00000016395	SNAI2	99	57.565	Pelodiscus_sinensis
ENSLAFG00000005117	SNAI3	77	65.939	ENSPSIG00000004262	SNAI3	91	65.939	Pelodiscus_sinensis
ENSLAFG00000005117	SNAI3	99	54.074	ENSPMGG00000013179	SNAI2	99	54.074	Periophthalmus_magnuspinnatus
ENSLAFG00000005117	SNAI3	99	56.458	ENSPEMG00000011739	Snai2	99	56.458	Peromyscus_maniculatus_bairdii
ENSLAFG00000005117	SNAI3	99	57.934	ENSPCIG00000025156	SNAI2	99	57.934	Phascolarctos_cinereus
ENSLAFG00000005117	SNAI3	89	54.583	ENSPREG00000008528	SNAI2	85	54.583	Poecilia_reticulata
ENSLAFG00000005117	SNAI3	100	73.288	ENSPPYG00000007643	SNAI3	100	73.288	Pongo_abelii
ENSLAFG00000005117	SNAI3	99	56.827	ENSPPYG00000018578	SNAI2	99	56.827	Pongo_abelii
ENSLAFG00000005117	SNAI3	99	57.934	ENSPCOG00000015656	SNAI2	99	57.934	Propithecus_coquereli
ENSLAFG00000005117	SNAI3	99	57.565	ENSPVAG00000009457	SNAI2	99	57.565	Pteropus_vampyrus
ENSLAFG00000005117	SNAI3	100	67.123	ENSRNOG00000013586	Snai3	100	65.753	Rattus_norvegicus
ENSLAFG00000005117	SNAI3	99	56.827	ENSRBIG00000041133	SNAI2	99	56.827	Rhinopithecus_bieti
ENSLAFG00000005117	SNAI3	100	72.945	ENSRBIG00000025770	SNAI3	100	72.945	Rhinopithecus_bieti
ENSLAFG00000005117	SNAI3	99	56.827	ENSRROG00000032273	SNAI2	99	56.827	Rhinopithecus_roxellana
ENSLAFG00000005117	SNAI3	100	72.603	ENSRROG00000032757	SNAI3	100	72.603	Rhinopithecus_roxellana
ENSLAFG00000005117	SNAI3	99	56.827	ENSSBOG00000035774	SNAI2	99	56.827	Saimiri_boliviensis_boliviensis
ENSLAFG00000005117	SNAI3	99	57.934	ENSSHAG00000004205	SNAI2	99	57.934	Sarcophilus_harrisii
ENSLAFG00000005117	SNAI3	99	54.982	ENSSFOG00015018025	SNAI2	99	54.982	Scleropages_formosus
ENSLAFG00000005117	SNAI3	99	45.652	ENSSFOG00015016115	snai3	93	48.845	Scleropages_formosus
ENSLAFG00000005117	SNAI3	99	57.565	ENSSPUG00000005427	-	99	57.565	Sphenodon_punctatus
ENSLAFG00000005117	SNAI3	99	57.565	ENSSSCG00000039568	SNAI2	99	57.565	Sus_scrofa
ENSLAFG00000005117	SNAI3	99	69.759	ENSTTRG00000006262	SNAI3	99	69.759	Tursiops_truncatus
ENSLAFG00000005117	SNAI3	84	60.435	ENSUAMG00000014942	SNAI2	98	60.435	Ursus_americanus
ENSLAFG00000005117	SNAI3	100	74.227	ENSUAMG00000020030	SNAI3	100	74.227	Ursus_americanus
ENSLAFG00000005117	SNAI3	97	56.767	ENSUMAG00000006525	SNAI2	99	56.767	Ursus_maritimus
ENSLAFG00000005117	SNAI3	99	57.934	ENSVVUG00000017625	SNAI2	99	57.934	Vulpes_vulpes
ENSLAFG00000005117	SNAI3	100	72.509	ENSVVUG00000003233	SNAI3	100	72.509	Vulpes_vulpes
ENSLAFG00000005117	SNAI3	99	56.827	ENSXETG00000024006	snai2	99	56.827	Xenopus_tropicalis