EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000005254 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 171 bases
Position: chrscaffold_25:33048963-33049133
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000004399	DNA_RNApol_7kD	PF03604.13	2.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000005253	-	171	-	ENSLAFP00000004399	57 (aa)	-	G3SVV5

Gene Model

Click here to download ENSLAFG00000005254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005254	-	100	94.737	ENSG00000147669	POLR2K	98	94.737	Homo_sapiens
ENSLAFG00000005254	-	100	94.737	ENSAMEG00000000452	POLR2K	98	94.737	Ailuropoda_melanoleuca
ENSLAFG00000005254	-	100	91.228	ENSAPEG00000010759	polr2k	98	91.228	Amphiprion_percula
ENSLAFG00000005254	-	100	91.228	ENSATEG00000013218	polr2k	98	91.228	Anabas_testudineus
ENSLAFG00000005254	-	100	85.965	ENSACAG00000020961	POLR2K	98	85.965	Anolis_carolinensis
ENSLAFG00000005254	-	100	87.719	ENSANAG00000030159	-	100	87.719	Aotus_nancymaae
ENSLAFG00000005254	-	100	94.737	ENSANAG00000031482	-	98	94.737	Aotus_nancymaae
ENSLAFG00000005254	-	100	66.102	ENSAMXG00000038868	-	98	66.102	Astyanax_mexicanus
ENSLAFG00000005254	-	74	85.714	ENSBTAG00000052277	-	61	85.714	Bos_taurus
ENSLAFG00000005254	-	100	94.737	ENSBTAG00000022539	POLR2K	98	94.737	Bos_taurus
ENSLAFG00000005254	-	100	94.737	ENSCJAG00000022168	-	98	94.737	Callithrix_jacchus
ENSLAFG00000005254	-	100	94.737	ENSCJAG00000041308	-	80	94.737	Callithrix_jacchus
ENSLAFG00000005254	-	100	91.228	ENSCAFG00000032117	POLR2K	98	91.228	Canis_familiaris
ENSLAFG00000005254	-	96	94.545	ENSCAFG00020011172	-	86	94.545	Canis_lupus_dingo
ENSLAFG00000005254	-	100	91.228	ENSCAFG00020023694	-	98	91.228	Canis_lupus_dingo
ENSLAFG00000005254	-	100	94.737	ENSCAFG00020000296	-	98	94.737	Canis_lupus_dingo
ENSLAFG00000005254	-	100	92.982	ENSCHIG00000007790	-	98	92.982	Capra_hircus
ENSLAFG00000005254	-	100	94.737	ENSCHIG00000012813	POLR2K	98	94.737	Capra_hircus
ENSLAFG00000005254	-	100	91.228	ENSTSYG00000035576	-	98	91.228	Carlito_syrichta
ENSLAFG00000005254	-	100	92.982	ENSTSYG00000032761	-	100	92.982	Carlito_syrichta
ENSLAFG00000005254	-	84	97.917	ENSCAPG00000017627	POLR2K	100	97.917	Cavia_aperea
ENSLAFG00000005254	-	100	92.982	ENSCPOG00000036717	POLR2K	98	92.982	Cavia_porcellus
ENSLAFG00000005254	-	100	94.737	ENSCCAG00000004867	-	98	94.737	Cebus_capucinus
ENSLAFG00000005254	-	100	94.737	ENSCCAG00000019633	-	98	94.737	Cebus_capucinus
ENSLAFG00000005254	-	100	91.228	ENSCCAG00000002072	-	100	91.228	Cebus_capucinus
ENSLAFG00000005254	-	100	94.737	ENSCATG00000007143	POLR2K	98	94.737	Cercocebus_atys
ENSLAFG00000005254	-	100	92.982	ENSCLAG00000010033	POLR2K	98	92.982	Chinchilla_lanigera
ENSLAFG00000005254	-	100	94.737	ENSCSAG00000012163	POLR2K	98	94.737	Chlorocebus_sabaeus
ENSLAFG00000005254	-	100	84.211	ENSCHOG00000000784	-	98	84.211	Choloepus_hoffmanni
ENSLAFG00000005254	-	100	94.737	ENSCHOG00000003599	POLR2K	98	94.737	Choloepus_hoffmanni
ENSLAFG00000005254	-	89	94.118	ENSCHOG00000008820	-	100	94.118	Choloepus_hoffmanni
ENSLAFG00000005254	-	100	94.737	ENSCANG00000041713	POLR2K	98	94.737	Colobus_angolensis_palliatus
ENSLAFG00000005254	-	100	94.737	ENSCGRG00000011617	Polr2k	98	94.737	Cricetulus_griseus_crigri
ENSLAFG00000005254	-	100	89.474	ENSCSEG00000017377	polr2k	98	89.474	Cynoglossus_semilaevis
ENSLAFG00000005254	-	100	91.228	ENSCVAG00000005198	polr2k	98	91.228	Cyprinodon_variegatus
ENSLAFG00000005254	-	100	91.228	ENSCVAG00000022985	-	98	91.228	Cyprinodon_variegatus
ENSLAFG00000005254	-	100	91.228	ENSDARG00000075616	polr2k	98	91.228	Danio_rerio
ENSLAFG00000005254	-	100	85.965	ENSDNOG00000038181	-	65	85.965	Dasypus_novemcinctus
ENSLAFG00000005254	-	100	92.982	ENSDNOG00000030774	-	98	92.982	Dasypus_novemcinctus
ENSLAFG00000005254	-	100	92.982	ENSDNOG00000047079	-	98	92.982	Dasypus_novemcinctus
ENSLAFG00000005254	-	100	94.737	ENSDNOG00000049353	-	98	94.737	Dasypus_novemcinctus
ENSLAFG00000005254	-	100	92.982	ENSDORG00000028386	Polr2k	98	92.982	Dipodomys_ordii
ENSLAFG00000005254	-	81	78.261	FBgn0262954	Rpb12	81	78.261	Drosophila_melanogaster
ENSLAFG00000005254	-	100	94.737	ENSEASG00005002840	-	98	94.737	Equus_asinus_asinus
ENSLAFG00000005254	-	88	72.000	ENSEASG00005016441	-	51	72.000	Equus_asinus_asinus
ENSLAFG00000005254	-	100	78.947	ENSECAG00000029464	-	72	78.947	Equus_caballus
ENSLAFG00000005254	-	100	94.737	ENSECAG00000021345	POLR2K	98	94.737	Equus_caballus
ENSLAFG00000005254	-	89	92.157	ENSEEUG00000015727	POLR2K	100	92.157	Erinaceus_europaeus
ENSLAFG00000005254	-	100	92.982	ENSFALG00000005795	POLR2K	98	92.982	Ficedula_albicollis
ENSLAFG00000005254	-	89	86.275	ENSFDAG00000018794	-	100	86.275	Fukomys_damarensis
ENSLAFG00000005254	-	100	94.737	ENSFDAG00000000348	POLR2K	98	94.737	Fukomys_damarensis
ENSLAFG00000005254	-	98	62.500	ENSFHEG00000019707	-	92	62.500	Fundulus_heteroclitus
ENSLAFG00000005254	-	100	91.228	ENSGAFG00000010349	polr2k	98	91.228	Gambusia_affinis
ENSLAFG00000005254	-	100	92.982	ENSGAGG00000009919	POLR2K	98	92.982	Gopherus_agassizii
ENSLAFG00000005254	-	100	94.737	ENSGGOG00000024539	POLR2K	98	94.737	Gorilla_gorilla
ENSLAFG00000005254	-	91	84.615	ENSGGOG00000015089	-	95	84.615	Gorilla_gorilla
ENSLAFG00000005254	-	100	91.228	ENSHBUG00000002269	polr2k	98	91.228	Haplochromis_burtoni
ENSLAFG00000005254	-	100	94.737	ENSHGLG00000004285	POLR2K	98	94.737	Heterocephalus_glaber_female
ENSLAFG00000005254	-	100	91.228	ENSHGLG00000021192	-	98	91.228	Heterocephalus_glaber_female
ENSLAFG00000005254	-	100	94.737	ENSHGLG00100005467	POLR2K	98	94.737	Heterocephalus_glaber_male
ENSLAFG00000005254	-	100	82.456	ENSHCOG00000016287	polr2k	98	82.456	Hippocampus_comes
ENSLAFG00000005254	-	100	94.737	ENSSTOG00000006123	-	98	94.737	Ictidomys_tridecemlineatus
ENSLAFG00000005254	-	81	95.652	ENSSTOG00000032566	-	94	95.652	Ictidomys_tridecemlineatus
ENSLAFG00000005254	-	96	83.636	ENSJJAG00000000698	-	95	83.636	Jaculus_jaculus
ENSLAFG00000005254	-	100	82.456	ENSJJAG00000012986	-	98	82.456	Jaculus_jaculus
ENSLAFG00000005254	-	100	92.982	ENSJJAG00000000271	-	98	92.982	Jaculus_jaculus
ENSLAFG00000005254	-	100	92.982	ENSJJAG00000014209	-	98	92.982	Jaculus_jaculus
ENSLAFG00000005254	-	98	80.357	ENSJJAG00000016100	-	88	80.357	Jaculus_jaculus
ENSLAFG00000005254	-	100	91.228	ENSKMAG00000007731	polr2k	98	91.228	Kryptolebias_marmoratus
ENSLAFG00000005254	-	100	91.228	ENSKMAG00000016379	-	98	91.228	Kryptolebias_marmoratus
ENSLAFG00000005254	-	100	89.474	ENSLBEG00000027114	polr2k	98	89.474	Labrus_bergylta
ENSLAFG00000005254	-	100	89.655	ENSLACG00000015753	POLR2K	98	89.655	Latimeria_chalumnae
ENSLAFG00000005254	-	100	91.228	ENSLOCG00000009730	polr2k	98	91.228	Lepisosteus_oculatus
ENSLAFG00000005254	-	100	94.737	ENSMFAG00000030863	-	98	94.737	Macaca_fascicularis
ENSLAFG00000005254	-	100	62.319	ENSMFAG00000039166	-	100	65.217	Macaca_fascicularis
ENSLAFG00000005254	-	100	94.737	ENSMMUG00000020714	-	98	94.737	Macaca_mulatta
ENSLAFG00000005254	-	100	82.456	ENSMMUG00000040264	-	100	82.456	Macaca_mulatta
ENSLAFG00000005254	-	100	94.737	ENSMNEG00000023503	-	98	94.737	Macaca_nemestrina
ENSLAFG00000005254	-	100	60.870	ENSMNEG00000033552	-	100	65.217	Macaca_nemestrina
ENSLAFG00000005254	-	93	84.906	ENSMLEG00000012572	-	78	84.906	Mandrillus_leucophaeus
ENSLAFG00000005254	-	100	94.737	ENSMLEG00000038200	POLR2K	98	94.737	Mandrillus_leucophaeus
ENSLAFG00000005254	-	100	91.228	ENSMAMG00000014290	polr2k	98	91.228	Mastacembelus_armatus
ENSLAFG00000005254	-	100	91.228	ENSMZEG00005003220	polr2k	98	91.228	Maylandia_zebra
ENSLAFG00000005254	-	100	94.737	ENSMAUG00000010288	Polr2k	98	94.737	Mesocricetus_auratus
ENSLAFG00000005254	-	100	94.737	ENSMICG00000044624	POLR2K	98	94.737	Microcebus_murinus
ENSLAFG00000005254	-	100	94.737	ENSMOCG00000009880	Polr2k	98	94.737	Microtus_ochrogaster
ENSLAFG00000005254	-	100	91.228	ENSMMOG00000017945	polr2k	98	91.228	Mola_mola
ENSLAFG00000005254	-	100	94.737	ENSMODG00000006312	POLR2K	98	94.737	Monodelphis_domestica
ENSLAFG00000005254	-	100	94.737	MGP_CAROLIEiJ_G0019735	Polr2k	98	94.737	Mus_caroli
ENSLAFG00000005254	-	100	94.737	ENSMUSG00000045996	Polr2k	98	94.737	Mus_musculus
ENSLAFG00000005254	-	100	94.737	MGP_PahariEiJ_G0019744	-	98	94.737	Mus_pahari
ENSLAFG00000005254	-	100	92.982	MGP_SPRETEiJ_G0020631	Polr2k	98	92.982	Mus_spretus
ENSLAFG00000005254	-	100	85.965	ENSMLUG00000029803	-	100	85.965	Myotis_lucifugus
ENSLAFG00000005254	-	100	91.228	ENSMLUG00000030053	-	98	91.228	Myotis_lucifugus
ENSLAFG00000005254	-	100	94.737	ENSNGAG00000020950	Polr2k	98	94.737	Nannospalax_galili
ENSLAFG00000005254	-	100	91.228	ENSNBRG00000013533	polr2k	98	91.228	Neolamprologus_brichardi
ENSLAFG00000005254	-	93	92.453	ENSNLEG00000031897	-	69	92.453	Nomascus_leucogenys
ENSLAFG00000005254	-	91	84.615	ENSNLEG00000018544	-	95	84.615	Nomascus_leucogenys
ENSLAFG00000005254	-	100	94.737	ENSMEUG00000000401	POLR2K	98	94.737	Notamacropus_eugenii
ENSLAFG00000005254	-	100	94.737	ENSOPRG00000009562	-	98	94.737	Ochotona_princeps
ENSLAFG00000005254	-	100	75.439	ENSOPRG00000010172	-	98	75.439	Ochotona_princeps
ENSLAFG00000005254	-	100	84.211	ENSOPRG00000005504	-	98	84.211	Ochotona_princeps
ENSLAFG00000005254	-	100	85.965	ENSOPRG00000015675	-	98	85.965	Ochotona_princeps
ENSLAFG00000005254	-	100	91.228	ENSODEG00000018618	-	98	91.228	Octodon_degus
ENSLAFG00000005254	-	100	87.719	ENSODEG00000019324	-	98	87.719	Octodon_degus
ENSLAFG00000005254	-	100	89.474	ENSODEG00000020322	-	98	89.474	Octodon_degus
ENSLAFG00000005254	-	100	85.965	ENSODEG00000020129	-	98	85.965	Octodon_degus
ENSLAFG00000005254	-	100	92.982	ENSODEG00000019784	-	98	92.982	Octodon_degus
ENSLAFG00000005254	-	100	92.982	ENSODEG00000004358	-	98	92.982	Octodon_degus
ENSLAFG00000005254	-	100	94.737	ENSOCUG00000029376	-	98	94.737	Oryctolagus_cuniculus
ENSLAFG00000005254	-	100	92.982	ENSOCUG00000016854	-	98	92.982	Oryctolagus_cuniculus
ENSLAFG00000005254	-	100	91.228	ENSORLG00015010501	polr2k	98	91.228	Oryzias_latipes_hsok
ENSLAFG00000005254	-	100	94.737	ENSOARG00000001480	POLR2K	98	94.737	Ovis_aries
ENSLAFG00000005254	-	100	94.737	ENSPPAG00000040441	POLR2K	98	94.737	Pan_paniscus
ENSLAFG00000005254	-	100	94.737	ENSPTRG00000020470	POLR2K	98	94.737	Pan_troglodytes
ENSLAFG00000005254	-	100	94.737	ENSPANG00000011129	-	98	94.737	Papio_anubis
ENSLAFG00000005254	-	100	92.982	ENSPSIG00000004097	POLR2K	98	92.982	Pelodiscus_sinensis
ENSLAFG00000005254	-	100	91.228	ENSPMGG00000022982	polr2k	98	91.228	Periophthalmus_magnuspinnatus
ENSLAFG00000005254	-	100	82.456	ENSPEMG00000001038	-	70	82.456	Peromyscus_maniculatus_bairdii
ENSLAFG00000005254	-	100	87.719	ENSPEMG00000008788	-	98	87.719	Peromyscus_maniculatus_bairdii
ENSLAFG00000005254	-	100	94.737	ENSPEMG00000012015	-	98	94.737	Peromyscus_maniculatus_bairdii
ENSLAFG00000005254	-	100	91.228	ENSPMEG00000022211	polr2k	98	91.228	Poecilia_mexicana
ENSLAFG00000005254	-	100	94.737	ENSPPYG00000018786	POLR2K	98	94.737	Pongo_abelii
ENSLAFG00000005254	-	100	96.491	ENSPCAG00000000746	POLR2K	98	96.491	Procavia_capensis
ENSLAFG00000005254	-	100	92.982	ENSPCOG00000026981	-	98	92.982	Propithecus_coquereli
ENSLAFG00000005254	-	100	91.228	ENSPCOG00000007173	-	98	91.228	Propithecus_coquereli
ENSLAFG00000005254	-	100	94.737	ENSPVAG00000009991	POLR2K	98	94.737	Pteropus_vampyrus
ENSLAFG00000005254	-	100	91.228	ENSPNYG00000012241	polr2k	98	91.228	Pundamilia_nyererei
ENSLAFG00000005254	-	100	94.737	ENSRNOG00000010408	Polr2k	98	94.737	Rattus_norvegicus
ENSLAFG00000005254	-	100	94.737	ENSRBIG00000035082	POLR2K	98	94.737	Rhinopithecus_bieti
ENSLAFG00000005254	-	98	82.143	ENSRBIG00000032617	-	79	82.143	Rhinopithecus_bieti
ENSLAFG00000005254	-	100	94.737	ENSRROG00000043844	-	98	94.737	Rhinopithecus_roxellana
ENSLAFG00000005254	-	98	82.143	ENSRROG00000036861	-	79	82.143	Rhinopithecus_roxellana
ENSLAFG00000005254	-	100	73.684	ENSSBOG00000028601	-	98	73.684	Saimiri_boliviensis_boliviensis
ENSLAFG00000005254	-	100	92.982	ENSSBOG00000019574	-	98	92.982	Saimiri_boliviensis_boliviensis
ENSLAFG00000005254	-	100	94.737	ENSSBOG00000010968	-	98	94.737	Saimiri_boliviensis_boliviensis
ENSLAFG00000005254	-	100	94.737	ENSSHAG00000006381	POLR2K	98	94.737	Sarcophilus_harrisii
ENSLAFG00000005254	-	100	91.228	ENSSFOG00015002881	polr2k	98	91.228	Scleropages_formosus
ENSLAFG00000005254	-	100	92.982	ENSSMAG00000007196	polr2k	98	92.982	Scophthalmus_maximus
ENSLAFG00000005254	-	100	91.228	ENSSLDG00000013975	polr2k	98	91.228	Seriola_lalandi_dorsalis
ENSLAFG00000005254	-	89	98.039	ENSSARG00000001557	POLR2K	100	98.039	Sorex_araneus
ENSLAFG00000005254	-	100	92.982	ENSSPUG00000018205	POLR2K	98	92.982	Sphenodon_punctatus
ENSLAFG00000005254	-	86	91.837	ENSSSCG00000036795	-	100	91.837	Sus_scrofa
ENSLAFG00000005254	-	100	92.982	ENSSSCG00000037160	-	98	92.982	Sus_scrofa
ENSLAFG00000005254	-	100	94.737	ENSSSCG00000021180	POLR2K	98	94.737	Sus_scrofa
ENSLAFG00000005254	-	100	92.982	ENSTGUG00000012051	-	98	92.982	Taeniopygia_guttata
ENSLAFG00000005254	-	100	92.982	ENSTGUG00000018366	-	98	92.982	Taeniopygia_guttata
ENSLAFG00000005254	-	100	84.211	ENSTBEG00000003799	-	98	84.211	Tupaia_belangeri
ENSLAFG00000005254	-	100	94.737	ENSTBEG00000010260	-	98	94.737	Tupaia_belangeri
ENSLAFG00000005254	-	100	94.737	ENSTTRG00000007489	POLR2K	98	94.737	Tursiops_truncatus
ENSLAFG00000005254	-	91	78.846	ENSUAMG00000008073	-	73	78.846	Ursus_americanus
ENSLAFG00000005254	-	91	78.846	ENSUMAG00000021763	-	73	78.846	Ursus_maritimus
ENSLAFG00000005254	-	100	94.737	ENSUMAG00000017508	-	98	94.737	Ursus_maritimus
ENSLAFG00000005254	-	100	94.737	ENSVPAG00000009630	POLR2K	98	94.737	Vicugna_pacos
ENSLAFG00000005254	-	100	87.719	ENSXETG00000025929	polr2k	98	87.719	Xenopus_tropicalis