EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000005272 (Gene tree)
Gene ID: -
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 37946 bases
Position: chrscaffold_121:266946-304891
Accession: 100663375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000004417	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000005275	PRPF6-201	2823	XM_003421759	ENSLAFP00000004417	940 (aa)	XP_003421807	G3SVX2

Gene Model

Click here to download ENSLAFG00000005272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005272	PRPF6	100	97.024	ENSG00000101161	PRPF6	100	97.024	Homo_sapiens
ENSLAFG00000005272	PRPF6	100	92.455	ENSAPOG00000010395	prpf6	96	92.880	Acanthochromis_polyacanthus
ENSLAFG00000005272	PRPF6	100	96.603	ENSAMEG00000001916	PRPF6	99	96.603	Ailuropoda_melanoleuca
ENSLAFG00000005272	PRPF6	100	92.136	ENSACIG00000019862	prpf6	96	92.561	Amphilophus_citrinellus
ENSLAFG00000005272	PRPF6	100	92.349	ENSAOCG00000012988	prpf6	96	92.774	Amphiprion_ocellaris
ENSLAFG00000005272	PRPF6	100	85.547	ENSAPEG00000008301	prpf6	100	86.291	Amphiprion_percula
ENSLAFG00000005272	PRPF6	100	91.817	ENSATEG00000005581	prpf6	96	92.242	Anabas_testudineus
ENSLAFG00000005272	PRPF6	100	97.237	ENSACAG00000006464	PRPF6	95	97.237	Anolis_carolinensis
ENSLAFG00000005272	PRPF6	100	97.343	ENSANAG00000012661	PRPF6	100	97.527	Aotus_nancymaae
ENSLAFG00000005272	PRPF6	100	92.030	ENSACLG00000025875	prpf6	96	92.455	Astatotilapia_calliptera
ENSLAFG00000005272	PRPF6	99	92.553	ENSAMXG00000001929	prpf6	96	92.979	Astyanax_mexicanus
ENSLAFG00000005272	PRPF6	100	97.343	ENSBTAG00000011656	PRPF6	100	97.343	Bos_taurus
ENSLAFG00000005272	PRPF6	100	97.343	ENSCJAG00000010616	PRPF6	100	97.343	Callithrix_jacchus
ENSLAFG00000005272	PRPF6	100	97.662	ENSCAFG00000013165	PRPF6	100	97.662	Canis_familiaris
ENSLAFG00000005272	PRPF6	100	97.662	ENSCAFG00020002050	PRPF6	100	97.662	Canis_lupus_dingo
ENSLAFG00000005272	PRPF6	100	97.343	ENSCHIG00000018187	PRPF6	100	97.343	Capra_hircus
ENSLAFG00000005272	PRPF6	100	97.556	ENSTSYG00000007814	PRPF6	100	97.556	Carlito_syrichta
ENSLAFG00000005272	PRPF6	97	96.510	ENSCAPG00000015077	PRPF6	100	96.510	Cavia_aperea
ENSLAFG00000005272	PRPF6	100	97.875	ENSCPOG00000007518	PRPF6	100	97.875	Cavia_porcellus
ENSLAFG00000005272	PRPF6	100	94.155	ENSCCAG00000024564	PRPF6	100	94.155	Cebus_capucinus
ENSLAFG00000005272	PRPF6	100	97.131	ENSCATG00000037473	PRPF6	100	97.131	Cercocebus_atys
ENSLAFG00000005272	PRPF6	100	93.943	ENSCLAG00000003854	PRPF6	100	93.943	Chinchilla_lanigera
ENSLAFG00000005272	PRPF6	100	91.869	ENSCSAG00000016742	PRPF6	100	91.869	Chlorocebus_sabaeus
ENSLAFG00000005272	PRPF6	85	80.163	ENSCHOG00000003315	-	98	79.835	Choloepus_hoffmanni
ENSLAFG00000005272	PRPF6	100	97.343	ENSCPBG00000013964	PRPF6	96	97.343	Chrysemys_picta_bellii
ENSLAFG00000005272	PRPF6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSLAFG00000005272	PRPF6	100	96.918	ENSCANG00000038230	PRPF6	100	96.918	Colobus_angolensis_palliatus
ENSLAFG00000005272	PRPF6	100	97.875	ENSCGRG00001022666	Prpf6	100	97.875	Cricetulus_griseus_chok1gshd
ENSLAFG00000005272	PRPF6	100	86.610	ENSCSEG00000018561	prpf6	100	87.035	Cynoglossus_semilaevis
ENSLAFG00000005272	PRPF6	100	92.455	ENSCVAG00000010550	prpf6	96	92.880	Cyprinodon_variegatus
ENSLAFG00000005272	PRPF6	100	92.030	ENSDARG00000091367	prpf6	99	92.455	Danio_rerio
ENSLAFG00000005272	PRPF6	100	97.662	ENSDNOG00000040544	PRPF6	100	97.662	Dasypus_novemcinctus
ENSLAFG00000005272	PRPF6	91	97.313	ENSDORG00000005406	Prpf6	100	97.313	Dipodomys_ordii
ENSLAFG00000005272	PRPF6	99	71.798	FBgn0036828	CG6841	98	72.103	Drosophila_melanogaster
ENSLAFG00000005272	PRPF6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSLAFG00000005272	PRPF6	99	86.850	ENSEBUG00000008835	prpf6	99	86.850	Eptatretus_burgeri
ENSLAFG00000005272	PRPF6	100	97.556	ENSEASG00005023115	PRPF6	100	97.556	Equus_asinus_asinus
ENSLAFG00000005272	PRPF6	100	93.305	ENSECAG00000013983	PRPF6	100	93.305	Equus_caballus
ENSLAFG00000005272	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSLAFG00000005272	PRPF6	100	90.755	ENSELUG00000001945	prpf6	93	90.755	Esox_lucius
ENSLAFG00000005272	PRPF6	100	97.768	ENSFCAG00000001183	PRPF6	100	97.768	Felis_catus
ENSLAFG00000005272	PRPF6	100	89.586	ENSFALG00000006046	-	97	89.586	Ficedula_albicollis
ENSLAFG00000005272	PRPF6	100	97.237	ENSFALG00000010326	-	97	97.237	Ficedula_albicollis
ENSLAFG00000005272	PRPF6	100	96.387	ENSFDAG00000006451	PRPF6	100	97.732	Fukomys_damarensis
ENSLAFG00000005272	PRPF6	100	92.986	ENSFHEG00000000560	prpf6	96	92.986	Fundulus_heteroclitus
ENSLAFG00000005272	PRPF6	100	89.006	ENSGMOG00000015622	prpf6	99	89.006	Gadus_morhua
ENSLAFG00000005272	PRPF6	100	97.237	ENSGALG00000006001	PRPF6	100	97.237	Gallus_gallus
ENSLAFG00000005272	PRPF6	100	87.460	ENSGAFG00000021109	prpf6	96	87.885	Gambusia_affinis
ENSLAFG00000005272	PRPF6	100	90.861	ENSGACG00000002576	prpf6	99	90.861	Gasterosteus_aculeatus
ENSLAFG00000005272	PRPF6	100	97.237	ENSGAGG00000008653	PRPF6	96	97.237	Gopherus_agassizii
ENSLAFG00000005272	PRPF6	100	97.024	ENSGGOG00000016876	PRPF6	100	97.024	Gorilla_gorilla
ENSLAFG00000005272	PRPF6	100	92.030	ENSHBUG00000004496	prpf6	96	92.455	Haplochromis_burtoni
ENSLAFG00000005272	PRPF6	100	97.662	ENSHGLG00000009222	PRPF6	100	97.662	Heterocephalus_glaber_female
ENSLAFG00000005272	PRPF6	97	97.601	ENSHGLG00100016600	PRPF6	100	97.601	Heterocephalus_glaber_male
ENSLAFG00000005272	PRPF6	100	90.861	ENSHCOG00000011513	prpf6	96	91.286	Hippocampus_comes
ENSLAFG00000005272	PRPF6	100	93.199	ENSIPUG00000004912	prpf6	96	93.199	Ictalurus_punctatus
ENSLAFG00000005272	PRPF6	100	95.223	ENSSTOG00000002922	PRPF6	100	95.223	Ictidomys_tridecemlineatus
ENSLAFG00000005272	PRPF6	100	97.875	ENSJJAG00000000836	Prpf6	100	97.875	Jaculus_jaculus
ENSLAFG00000005272	PRPF6	100	91.817	ENSKMAG00000017800	prpf6	96	92.242	Kryptolebias_marmoratus
ENSLAFG00000005272	PRPF6	100	91.498	ENSLBEG00000012582	prpf6	96	91.498	Labrus_bergylta
ENSLAFG00000005272	PRPF6	100	93.943	ENSLOCG00000004827	prpf6	96	92.986	Lepisosteus_oculatus
ENSLAFG00000005272	PRPF6	100	96.918	ENSMFAG00000037542	PRPF6	100	96.918	Macaca_fascicularis
ENSLAFG00000005272	PRPF6	100	90.446	ENSMMUG00000015558	PRPF6	98	99.133	Macaca_mulatta
ENSLAFG00000005272	PRPF6	100	82.945	ENSMNEG00000045555	PRPF6	100	82.945	Macaca_nemestrina
ENSLAFG00000005272	PRPF6	100	92.136	ENSMAMG00000010718	prpf6	96	92.561	Mastacembelus_armatus
ENSLAFG00000005272	PRPF6	100	91.507	ENSMZEG00005015261	-	99	91.932	Maylandia_zebra
ENSLAFG00000005272	PRPF6	94	91.497	ENSMZEG00005026539	prpf6	100	91.950	Maylandia_zebra
ENSLAFG00000005272	PRPF6	97	97.165	ENSMGAG00000006634	PRPF6	100	97.165	Meleagris_gallopavo
ENSLAFG00000005272	PRPF6	100	97.981	ENSMAUG00000013969	Prpf6	100	97.981	Mesocricetus_auratus
ENSLAFG00000005272	PRPF6	87	96.959	ENSMICG00000017793	PRPF6	99	96.959	Microcebus_murinus
ENSLAFG00000005272	PRPF6	100	98.087	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSLAFG00000005272	PRPF6	100	91.286	ENSMMOG00000020419	prpf6	100	91.711	Mola_mola
ENSLAFG00000005272	PRPF6	99	98.027	ENSMODG00000017051	PRPF6	99	98.027	Monodelphis_domestica
ENSLAFG00000005272	PRPF6	99	92.266	ENSMALG00000000089	prpf6	100	92.266	Monopterus_albus
ENSLAFG00000005272	PRPF6	100	91.286	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSLAFG00000005272	PRPF6	100	97.981	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSLAFG00000005272	PRPF6	100	97.981	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSLAFG00000005272	PRPF6	100	97.981	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSLAFG00000005272	PRPF6	91	97.497	ENSMPUG00000008673	PRPF6	99	97.497	Mustela_putorius_furo
ENSLAFG00000005272	PRPF6	100	97.981	ENSNGAG00000003365	Prpf6	100	97.981	Nannospalax_galili
ENSLAFG00000005272	PRPF6	100	92.136	ENSNBRG00000015025	prpf6	96	92.561	Neolamprologus_brichardi
ENSLAFG00000005272	PRPF6	100	96.918	ENSNLEG00000010208	PRPF6	100	96.918	Nomascus_leucogenys
ENSLAFG00000005272	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSLAFG00000005272	PRPF6	100	92.128	ENSODEG00000004841	PRPF6	100	92.128	Octodon_degus
ENSLAFG00000005272	PRPF6	100	92.030	ENSONIG00000017406	prpf6	96	92.455	Oreochromis_niloticus
ENSLAFG00000005272	PRPF6	100	97.556	ENSOANG00000004920	PRPF6	100	97.556	Ornithorhynchus_anatinus
ENSLAFG00000005272	PRPF6	99	96.459	ENSOCUG00000014151	PRPF6	100	96.459	Oryctolagus_cuniculus
ENSLAFG00000005272	PRPF6	100	91.817	ENSORLG00000009592	prpf6	96	91.817	Oryzias_latipes
ENSLAFG00000005272	PRPF6	100	91.923	ENSORLG00020001458	prpf6	96	91.923	Oryzias_latipes_hni
ENSLAFG00000005272	PRPF6	100	91.923	ENSORLG00015018762	prpf6	96	91.923	Oryzias_latipes_hsok
ENSLAFG00000005272	PRPF6	100	91.605	ENSOMEG00000012174	prpf6	96	92.030	Oryzias_melastigma
ENSLAFG00000005272	PRPF6	100	90.127	ENSOGAG00000007573	PRPF6	100	90.127	Otolemur_garnettii
ENSLAFG00000005272	PRPF6	100	96.918	ENSOARG00000008776	PRPF6	99	96.918	Ovis_aries
ENSLAFG00000005272	PRPF6	100	97.024	ENSPPAG00000008686	PRPF6	100	97.024	Pan_paniscus
ENSLAFG00000005272	PRPF6	100	97.662	ENSPPRG00000008497	PRPF6	100	97.662	Panthera_pardus
ENSLAFG00000005272	PRPF6	97	97.601	ENSPTIG00000011184	PRPF6	97	97.601	Panthera_tigris_altaica
ENSLAFG00000005272	PRPF6	100	97.024	ENSPTRG00000013765	PRPF6	100	97.024	Pan_troglodytes
ENSLAFG00000005272	PRPF6	100	96.812	ENSPANG00000024135	PRPF6	100	96.812	Papio_anubis
ENSLAFG00000005272	PRPF6	100	93.624	ENSPKIG00000005627	prpf6	99	94.049	Paramormyrops_kingsleyae
ENSLAFG00000005272	PRPF6	94	97.392	ENSPSIG00000007717	PRPF6	100	97.392	Pelodiscus_sinensis
ENSLAFG00000005272	PRPF6	100	89.597	ENSPMGG00000008925	prpf6	96	89.809	Periophthalmus_magnuspinnatus
ENSLAFG00000005272	PRPF6	100	98.087	ENSPEMG00000016036	Prpf6	100	98.087	Peromyscus_maniculatus_bairdii
ENSLAFG00000005272	PRPF6	99	88.310	ENSPMAG00000006144	prpf6	99	88.310	Petromyzon_marinus
ENSLAFG00000005272	PRPF6	100	97.768	ENSPCIG00000017909	PRPF6	100	97.768	Phascolarctos_cinereus
ENSLAFG00000005272	PRPF6	100	92.349	ENSPFOG00000006431	prpf6	96	92.774	Poecilia_formosa
ENSLAFG00000005272	PRPF6	100	92.242	ENSPLAG00000005974	prpf6	96	92.667	Poecilia_latipinna
ENSLAFG00000005272	PRPF6	100	92.455	ENSPMEG00000009977	prpf6	96	92.880	Poecilia_mexicana
ENSLAFG00000005272	PRPF6	100	92.349	ENSPREG00000017993	prpf6	92	92.774	Poecilia_reticulata
ENSLAFG00000005272	PRPF6	100	96.493	ENSPPYG00000011256	PRPF6	100	96.493	Pongo_abelii
ENSLAFG00000005272	PRPF6	95	100.000	ENSPCAG00000006536	PRPF6	88	100.000	Procavia_capensis
ENSLAFG00000005272	PRPF6	100	97.131	ENSPCOG00000016881	PRPF6	100	97.131	Propithecus_coquereli
ENSLAFG00000005272	PRPF6	100	91.923	ENSPVAG00000014316	PRPF6	100	91.923	Pteropus_vampyrus
ENSLAFG00000005272	PRPF6	100	75.584	ENSPNYG00000001939	prpf6	96	80.871	Pundamilia_nyererei
ENSLAFG00000005272	PRPF6	100	92.880	ENSPNAG00000015606	prpf6	96	93.305	Pygocentrus_nattereri
ENSLAFG00000005272	PRPF6	100	97.875	ENSRNOG00000051498	Prpf6	100	97.875	Rattus_norvegicus
ENSLAFG00000005272	PRPF6	100	96.918	ENSRBIG00000043613	PRPF6	100	96.918	Rhinopithecus_bieti
ENSLAFG00000005272	PRPF6	100	93.757	ENSRROG00000040969	PRPF6	98	97.751	Rhinopithecus_roxellana
ENSLAFG00000005272	PRPF6	91	93.253	ENSSBOG00000020632	PRPF6	93	93.253	Saimiri_boliviensis_boliviensis
ENSLAFG00000005272	PRPF6	100	97.768	ENSSHAG00000016810	PRPF6	100	97.768	Sarcophilus_harrisii
ENSLAFG00000005272	PRPF6	99	93.985	ENSSFOG00015020859	prpf6	100	94.415	Scleropages_formosus
ENSLAFG00000005272	PRPF6	100	91.286	ENSSMAG00000008112	prpf6	96	91.286	Scophthalmus_maximus
ENSLAFG00000005272	PRPF6	100	92.030	ENSSDUG00000016142	prpf6	96	92.455	Seriola_dumerili
ENSLAFG00000005272	PRPF6	100	92.030	ENSSLDG00000025283	prpf6	100	89.054	Seriola_lalandi_dorsalis
ENSLAFG00000005272	PRPF6	94	96.032	ENSSPUG00000018260	PRPF6	100	96.032	Sphenodon_punctatus
ENSLAFG00000005272	PRPF6	100	92.030	ENSSPAG00000015850	prpf6	96	92.455	Stegastes_partitus
ENSLAFG00000005272	PRPF6	100	97.237	ENSSSCG00000029119	PRPF6	100	97.052	Sus_scrofa
ENSLAFG00000005272	PRPF6	100	97.343	ENSTGUG00000007221	PRPF6	99	97.343	Taeniopygia_guttata
ENSLAFG00000005272	PRPF6	100	91.392	ENSTRUG00000002920	prpf6	96	91.817	Takifugu_rubripes
ENSLAFG00000005272	PRPF6	100	85.095	ENSTNIG00000017873	prpf6	100	85.518	Tetraodon_nigroviridis
ENSLAFG00000005272	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSLAFG00000005272	PRPF6	100	97.556	ENSTTRG00000013068	PRPF6	100	97.556	Tursiops_truncatus
ENSLAFG00000005272	PRPF6	98	96.087	ENSUMAG00000021631	PRPF6	98	96.087	Ursus_maritimus
ENSLAFG00000005272	PRPF6	100	97.662	ENSVVUG00000014948	PRPF6	100	97.662	Vulpes_vulpes
ENSLAFG00000005272	PRPF6	100	95.218	ENSXETG00000012054	prpf6	97	95.643	Xenopus_tropicalis
ENSLAFG00000005272	PRPF6	100	92.455	ENSXCOG00000008082	prpf6	96	92.880	Xiphophorus_couchianus
ENSLAFG00000005272	PRPF6	100	92.455	ENSXMAG00000015581	prpf6	96	92.880	Xiphophorus_maculatus