EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000005275 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 2680 bases
Position: chrscaffold_73:6608192-6610871
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000004418	APOBEC_N	PF08210.11	3.5e-42	1	1
ENSLAFP00000004418	APOBEC_C	PF05240.14	6.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000005276	-	540	-	ENSLAFP00000004418	180 (aa)	-	G3SVX3

Gene Model

Click here to download ENSLAFG00000005275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000005275	-	99	39.344	ENSLAFG00000027404	-	96	39.344
ENSLAFG00000005275	-	98	41.011	ENSLAFG00000000721	AICDA	90	41.011
ENSLAFG00000005275	-	99	81.564	ENSLAFG00000020906	-	90	81.564
ENSLAFG00000005275	-	99	58.989	ENSLAFG00000008890	-	89	58.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005275	-	99	53.763	ENSG00000239713	APOBEC3G	96	53.763	Homo_sapiens
ENSLAFG00000005275	-	98	49.198	ENSAMEG00000010815	-	81	49.198	Ailuropoda_melanoleuca
ENSLAFG00000005275	-	93	48.765	ENSANAG00000027961	-	97	48.765	Aotus_nancymaae
ENSLAFG00000005275	-	99	58.201	ENSANAG00000020573	-	94	58.201	Aotus_nancymaae
ENSLAFG00000005275	-	99	54.839	ENSANAG00000031271	APOBEC3G	96	54.839	Aotus_nancymaae
ENSLAFG00000005275	-	99	51.366	ENSANAG00000028416	-	96	51.366	Aotus_nancymaae
ENSLAFG00000005275	-	97	48.087	ENSBTAG00000037800	-	97	48.087	Bos_taurus
ENSLAFG00000005275	-	98	52.174	ENSCJAG00000023368	APOBEC3G	96	52.174	Callithrix_jacchus
ENSLAFG00000005275	-	98	55.376	ENSCJAG00000011578	-	75	55.376	Callithrix_jacchus
ENSLAFG00000005275	-	99	45.641	ENSCAFG00000015211	-	96	45.641	Canis_familiaris
ENSLAFG00000005275	-	69	50.000	ENSCAFG00000023589	-	88	50.000	Canis_familiaris
ENSLAFG00000005275	-	99	46.629	ENSCAFG00020002661	-	80	44.041	Canis_lupus_dingo
ENSLAFG00000005275	-	98	44.845	ENSCAFG00020002641	-	80	44.845	Canis_lupus_dingo
ENSLAFG00000005275	-	99	46.774	ENSCHIG00000012694	-	90	46.448	Capra_hircus
ENSLAFG00000005275	-	99	46.237	ENSCCAG00000032509	-	98	46.237	Cebus_capucinus
ENSLAFG00000005275	-	99	57.143	ENSCCAG00000030928	-	91	57.143	Cebus_capucinus
ENSLAFG00000005275	-	99	56.989	ENSCCAG00000033147	-	93	56.989	Cebus_capucinus
ENSLAFG00000005275	-	98	50.000	ENSCCAG00000032232	-	96	50.000	Cebus_capucinus
ENSLAFG00000005275	-	99	50.000	ENSCSAG00000006376	APOBEC3G	85	50.000	Chlorocebus_sabaeus
ENSLAFG00000005275	-	99	59.615	ENSCANG00000029968	-	73	59.615	Colobus_angolensis_palliatus
ENSLAFG00000005275	-	98	34.831	ENSDNOG00000039749	-	79	37.079	Dasypus_novemcinctus
ENSLAFG00000005275	-	99	53.763	ENSEASG00005018643	-	80	53.763	Equus_asinus_asinus
ENSLAFG00000005275	-	99	51.630	ENSECAG00000032756	-	63	51.630	Equus_caballus
ENSLAFG00000005275	-	99	53.763	ENSECAG00000022371	APOBEC3Z1B	82	53.763	Equus_caballus
ENSLAFG00000005275	-	99	53.143	ENSGGOG00000013750	APOBEC3G	95	53.143	Gorilla_gorilla
ENSLAFG00000005275	-	99	53.226	ENSMFAG00000044711	APOBEC3G	85	53.226	Macaca_fascicularis
ENSLAFG00000005275	-	99	53.763	ENSMMUG00000039346	APOBEC3G	93	53.763	Macaca_mulatta
ENSLAFG00000005275	-	99	53.226	ENSMNEG00000038847	APOBEC3G	93	53.226	Macaca_nemestrina
ENSLAFG00000005275	-	99	52.151	ENSMLEG00000024444	APOBEC3G	92	52.151	Mandrillus_leucophaeus
ENSLAFG00000005275	-	98	58.696	ENSMICG00000043748	-	91	58.696	Microcebus_murinus
ENSLAFG00000005275	-	97	56.831	ENSMICG00000047191	-	97	56.831	Microcebus_murinus
ENSLAFG00000005275	-	98	46.995	ENSMPUG00000013235	-	94	46.995	Mustela_putorius_furo
ENSLAFG00000005275	-	97	51.630	ENSMLUG00000014565	-	97	51.630	Myotis_lucifugus
ENSLAFG00000005275	-	99	58.824	ENSMLUG00000008631	-	99	58.824	Myotis_lucifugus
ENSLAFG00000005275	-	61	50.909	ENSMLUG00000022226	-	81	50.909	Myotis_lucifugus
ENSLAFG00000005275	-	88	52.147	ENSMLUG00000026771	-	72	52.147	Myotis_lucifugus
ENSLAFG00000005275	-	99	53.933	ENSMLUG00000000977	-	93	53.933	Myotis_lucifugus
ENSLAFG00000005275	-	97	45.055	ENSMLUG00000028652	-	80	44.865	Myotis_lucifugus
ENSLAFG00000005275	-	99	50.811	ENSMLUG00000023022	-	83	50.811	Myotis_lucifugus
ENSLAFG00000005275	-	99	51.351	ENSMLUG00000024957	-	85	51.351	Myotis_lucifugus
ENSLAFG00000005275	-	99	51.880	ENSMLUG00000024853	-	98	51.880	Myotis_lucifugus
ENSLAFG00000005275	-	97	49.444	ENSMLUG00000000517	-	100	49.444	Myotis_lucifugus
ENSLAFG00000005275	-	98	54.762	ENSNLEG00000018922	-	95	54.762	Nomascus_leucogenys
ENSLAFG00000005275	-	98	53.371	ENSOPRG00000002326	-	98	53.371	Ochotona_princeps
ENSLAFG00000005275	-	88	53.293	ENSOCUG00000023532	-	64	53.293	Oryctolagus_cuniculus
ENSLAFG00000005275	-	100	58.673	ENSOGAG00000024822	-	96	58.673	Otolemur_garnettii
ENSLAFG00000005275	-	99	63.441	ENSOGAG00000032518	-	97	63.441	Otolemur_garnettii
ENSLAFG00000005275	-	97	47.826	ENSOARG00000016213	APOBEC3Z1	97	47.826	Ovis_aries
ENSLAFG00000005275	-	99	54.301	ENSPPAG00000033277	-	77	54.301	Pan_paniscus
ENSLAFG00000005275	-	99	54.839	ENSPTRG00000014387	APOBEC3G	97	54.839	Pan_troglodytes
ENSLAFG00000005275	-	99	52.151	ENSPPYG00000011833	APOBEC3G	89	52.151	Pongo_abelii
ENSLAFG00000005275	-	72	68.217	ENSPCAG00000001848	-	94	68.217	Procavia_capensis
ENSLAFG00000005275	-	99	62.703	ENSPCAG00000015518	-	64	62.703	Procavia_capensis
ENSLAFG00000005275	-	94	57.386	ENSPCOG00000016357	-	87	57.386	Propithecus_coquereli
ENSLAFG00000005275	-	99	52.151	ENSPVAG00000004045	-	93	52.151	Pteropus_vampyrus
ENSLAFG00000005275	-	99	53.226	ENSRBIG00000035436	APOBEC3G	90	53.226	Rhinopithecus_bieti
ENSLAFG00000005275	-	98	51.136	ENSSBOG00000025673	-	91	51.136	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	99	56.383	ENSSBOG00000029091	-	91	56.383	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	98	52.717	ENSSBOG00000023468	-	77	52.717	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	99	52.688	ENSSBOG00000026566	-	96	52.688	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	99	55.914	ENSSBOG00000018208	-	98	55.914	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	99	55.376	ENSSBOG00000021384	-	96	55.376	Saimiri_boliviensis_boliviensis
ENSLAFG00000005275	-	96	52.809	ENSTTRG00000009395	-	90	52.809	Tursiops_truncatus
ENSLAFG00000005275	-	99	48.677	ENSUMAG00000014447	-	94	48.677	Ursus_maritimus
ENSLAFG00000005275	-	98	50.276	ENSUMAG00000002249	-	87	50.276	Ursus_maritimus