EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000005479 (Gene tree)
Gene ID: -
Gene Symbol: ESF1
Alias: C20orf6|bA526K24.1
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 76443 bases
Position: chrscaffold_19:15283260-15359702
Accession: 15898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000018444	NUC153	PF08159.12	1.9e-11	1	1
ENSLAFP00000004596	NUC153	PF08159.12	2.1e-11	1	1
ENSLAFP00000024342	NUC153	PF08159.12	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000005482	ESF1-201	2517	-	ENSLAFP00000004596	838 (aa)	-	G3SWB3
ENSLAFT00000026915	ESF1-202	2502	-	ENSLAFP00000024342	833 (aa)	-	G3U934
ENSLAFT00000033335	ESF1-204	1620	-	ENSLAFP00000025677	540 (aa)	-	G3UCW9
ENSLAFT00000028829	ESF1-203	2427	-	ENSLAFP00000018444	808 (aa)	-	G3TS86

Gene Model

Click here to download ENSLAFG00000005479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005479	ESF1	100	82.201	ENSG00000089048	ESF1	100	82.201	Homo_sapiens
ENSLAFG00000005479	ESF1	63	53.618	ENSAPOG00000003004	esf1	99	53.700	Acanthochromis_polyacanthus
ENSLAFG00000005479	ESF1	100	80.233	ENSAMEG00000008830	ESF1	100	79.651	Ailuropoda_melanoleuca
ENSLAFG00000005479	ESF1	81	68.000	ENSACIG00000018305	esf1	97	68.056	Amphilophus_citrinellus
ENSLAFG00000005479	ESF1	80	71.429	ENSAOCG00000006033	esf1	93	70.833	Amphiprion_ocellaris
ENSLAFG00000005479	ESF1	80	71.429	ENSAPEG00000022385	esf1	94	70.833	Amphiprion_percula
ENSLAFG00000005479	ESF1	77	70.270	ENSATEG00000016321	esf1	90	70.833	Anabas_testudineus
ENSLAFG00000005479	ESF1	100	60.329	ENSAPLG00000012113	ESF1	100	54.545	Anas_platyrhynchos
ENSLAFG00000005479	ESF1	67	73.145	ENSACAG00000000963	ESF1	70	69.388	Anolis_carolinensis
ENSLAFG00000005479	ESF1	100	82.491	ENSANAG00000036778	ESF1	100	82.374	Aotus_nancymaae
ENSLAFG00000005479	ESF1	81	67.532	ENSACLG00000002972	esf1	94	66.667	Astatotilapia_calliptera
ENSLAFG00000005479	ESF1	80	63.230	ENSAMXG00000001172	esf1	93	62.500	Astyanax_mexicanus
ENSLAFG00000005479	ESF1	100	78.862	ENSBTAG00000007130	ESF1	100	79.326	Bos_taurus
ENSLAFG00000005479	ESF1	100	81.110	ENSCJAG00000004640	ESF1	100	81.582	Callithrix_jacchus
ENSLAFG00000005479	ESF1	100	82.042	ENSCAFG00000005587	ESF1	100	81.573	Canis_familiaris
ENSLAFG00000005479	ESF1	100	82.042	ENSCAFG00020027530	ESF1	100	81.573	Canis_lupus_dingo
ENSLAFG00000005479	ESF1	100	81.213	ENSCHIG00000021188	ESF1	100	80.856	Capra_hircus
ENSLAFG00000005479	ESF1	100	82.763	ENSTSYG00000009956	ESF1	100	82.290	Carlito_syrichta
ENSLAFG00000005479	ESF1	86	80.769	ENSCAPG00000010333	-	100	80.769	Cavia_aperea
ENSLAFG00000005479	ESF1	100	68.772	ENSCAPG00000010466	-	100	68.319	Cavia_aperea
ENSLAFG00000005479	ESF1	100	80.572	ENSCPOG00000014027	-	100	79.976	Cavia_porcellus
ENSLAFG00000005479	ESF1	100	81.743	ENSCCAG00000024521	ESF1	100	82.097	Cebus_capucinus
ENSLAFG00000005479	ESF1	100	80.468	ENSCATG00000042792	ESF1	100	81.520	Cercocebus_atys
ENSLAFG00000005479	ESF1	100	81.071	ENSCLAG00000013266	-	100	80.595	Chinchilla_lanigera
ENSLAFG00000005479	ESF1	100	80.657	ENSCSAG00000011777	ESF1	100	81.594	Chlorocebus_sabaeus
ENSLAFG00000005479	ESF1	51	52.239	ENSCING00000020446	-	95	51.562	Ciona_intestinalis
ENSLAFG00000005479	ESF1	78	51.515	ENSCSAVG00000009015	-	97	50.794	Ciona_savignyi
ENSLAFG00000005479	ESF1	100	80.980	ENSCANG00000030674	ESF1	100	81.776	Colobus_angolensis_palliatus
ENSLAFG00000005479	ESF1	100	79.454	ENSCGRG00001018257	Esf1	100	79.691	Cricetulus_griseus_chok1gshd
ENSLAFG00000005479	ESF1	78	61.538	ENSCSEG00000001159	esf1	93	61.905	Cynoglossus_semilaevis
ENSLAFG00000005479	ESF1	78	72.308	ENSCVAG00000007894	esf1	99	65.278	Cyprinodon_variegatus
ENSLAFG00000005479	ESF1	79	66.216	ENSDARG00000008740	esf1	89	66.667	Danio_rerio
ENSLAFG00000005479	ESF1	100	80.769	ENSDNOG00000019409	ESF1	100	82.172	Dasypus_novemcinctus
ENSLAFG00000005479	ESF1	100	79.643	ENSDORG00000016313	Esf1	100	79.524	Dipodomys_ordii
ENSLAFG00000005479	ESF1	79	48.780	FBgn0024364	CG11417	80	52.857	Drosophila_melanogaster
ENSLAFG00000005479	ESF1	82	83.830	ENSETEG00000004471	ESF1	79	83.830	Echinops_telfairi
ENSLAFG00000005479	ESF1	70	49.662	ENSEBUG00000015161	esf1	99	43.815	Eptatretus_burgeri
ENSLAFG00000005479	ESF1	100	82.256	ENSEASG00005001777	ESF1	100	81.434	Equus_asinus_asinus
ENSLAFG00000005479	ESF1	100	82.374	ENSECAG00000019188	ESF1	100	81.551	Equus_caballus
ENSLAFG00000005479	ESF1	74	59.968	ENSEEUG00000015837	-	98	58.692	Erinaceus_europaeus
ENSLAFG00000005479	ESF1	70	57.259	ENSELUG00000000408	esf1	79	56.024	Esox_lucius
ENSLAFG00000005479	ESF1	100	81.628	ENSFCAG00000000919	ESF1	100	81.279	Felis_catus
ENSLAFG00000005479	ESF1	70	71.303	ENSFALG00000010914	ESF1	99	60.890	Ficedula_albicollis
ENSLAFG00000005479	ESF1	100	81.406	ENSFDAG00000014777	ESF1	100	80.930	Fukomys_damarensis
ENSLAFG00000005479	ESF1	63	58.915	ENSFHEG00000014984	esf1	99	60.039	Fundulus_heteroclitus
ENSLAFG00000005479	ESF1	100	60.885	ENSGALG00000034768	ESF1	100	60.186	Gallus_gallus
ENSLAFG00000005479	ESF1	80	64.865	ENSGAFG00000000540	esf1	93	65.278	Gambusia_affinis
ENSLAFG00000005479	ESF1	100	82.084	ENSGGOG00000006692	ESF1	100	82.201	Gorilla_gorilla
ENSLAFG00000005479	ESF1	81	68.831	ENSHBUG00000001890	esf1	90	68.056	Haplochromis_burtoni
ENSLAFG00000005479	ESF1	100	81.168	ENSHGLG00000011505	ESF1	100	80.810	Heterocephalus_glaber_female
ENSLAFG00000005479	ESF1	100	81.168	ENSHGLG00100015045	ESF1	100	80.810	Heterocephalus_glaber_male
ENSLAFG00000005479	ESF1	76	65.385	ENSIPUG00000006507	esf1	88	65.278	Ictalurus_punctatus
ENSLAFG00000005479	ESF1	100	81.116	ENSSTOG00000009846	ESF1	100	80.783	Ictidomys_tridecemlineatus
ENSLAFG00000005479	ESF1	100	78.706	ENSJJAG00000012570	Esf1	100	78.471	Jaculus_jaculus
ENSLAFG00000005479	ESF1	99	57.355	ENSLACG00000016439	ESF1	88	81.429	Latimeria_chalumnae
ENSLAFG00000005479	ESF1	76	67.949	ENSLOCG00000015979	esf1	100	54.096	Lepisosteus_oculatus
ENSLAFG00000005479	ESF1	100	80.936	ENSMFAG00000036841	ESF1	100	82.084	Macaca_fascicularis
ENSLAFG00000005479	ESF1	100	80.819	ENSMNEG00000044042	ESF1	100	81.967	Macaca_nemestrina
ENSLAFG00000005479	ESF1	100	80.702	ENSMLEG00000037121	ESF1	100	81.850	Mandrillus_leucophaeus
ENSLAFG00000005479	ESF1	80	70.270	ENSMAMG00000018648	esf1	89	70.833	Mastacembelus_armatus
ENSLAFG00000005479	ESF1	63	57.752	ENSMZEG00005013912	esf1	99	58.300	Maylandia_zebra
ENSLAFG00000005479	ESF1	100	59.836	ENSMGAG00000004291	ESF1	76	64.472	Meleagris_gallopavo
ENSLAFG00000005479	ESF1	100	79.454	ENSMAUG00000015975	Esf1	100	79.335	Mesocricetus_auratus
ENSLAFG00000005479	ESF1	100	80.986	ENSMICG00000010711	ESF1	100	82.160	Microcebus_murinus
ENSLAFG00000005479	ESF1	100	76.576	ENSMOCG00000005902	Esf1	100	76.694	Microtus_ochrogaster
ENSLAFG00000005479	ESF1	63	55.493	ENSMMOG00000018693	esf1	99	57.854	Mola_mola
ENSLAFG00000005479	ESF1	100	70.348	ENSMODG00000005066	ESF1	100	70.708	Monodelphis_domestica
ENSLAFG00000005479	ESF1	74	66.216	ENSMALG00000007338	esf1	87	66.667	Monopterus_albus
ENSLAFG00000005479	ESF1	100	78.487	MGP_CAROLIEiJ_G0024365	Esf1	100	78.251	Mus_caroli
ENSLAFG00000005479	ESF1	100	76.678	ENSMUSG00000045624	Esf1	100	77.385	Mus_musculus
ENSLAFG00000005479	ESF1	100	77.791	MGP_PahariEiJ_G0025810	Esf1	100	77.896	Mus_pahari
ENSLAFG00000005479	ESF1	100	77.370	MGP_SPRETEiJ_G0025285	Esf1	100	78.081	Mus_spretus
ENSLAFG00000005479	ESF1	100	82.670	ENSMPUG00000001450	ESF1	100	82.553	Mustela_putorius_furo
ENSLAFG00000005479	ESF1	100	81.551	ENSMLUG00000013080	ESF1	100	81.199	Myotis_lucifugus
ENSLAFG00000005479	ESF1	100	79.977	ENSNLEG00000014563	ESF1	100	79.742	Nomascus_leucogenys
ENSLAFG00000005479	ESF1	59	100.000	ENSMEUG00000005061	-	58	100.000	Notamacropus_eugenii
ENSLAFG00000005479	ESF1	64	80.962	ENSOPRG00000004862	ESF1	100	82.874	Ochotona_princeps
ENSLAFG00000005479	ESF1	100	81.667	ENSODEG00000006824	ESF1	100	81.310	Octodon_degus
ENSLAFG00000005479	ESF1	80	68.831	ENSONIG00000006804	esf1	93	68.056	Oreochromis_niloticus
ENSLAFG00000005479	ESF1	70	79.262	ENSOANG00000008432	-	100	68.140	Ornithorhynchus_anatinus
ENSLAFG00000005479	ESF1	100	79.034	ENSOCUG00000005414	ESF1	100	78.563	Oryctolagus_cuniculus
ENSLAFG00000005479	ESF1	63	53.407	ENSORLG00000018625	esf1	99	53.008	Oryzias_latipes
ENSLAFG00000005479	ESF1	80	66.667	ENSORLG00015022826	esf1	97	65.278	Oryzias_latipes_hsok
ENSLAFG00000005479	ESF1	63	54.307	ENSOMEG00000009311	esf1	99	53.933	Oryzias_melastigma
ENSLAFG00000005479	ESF1	100	78.266	ENSOGAG00000016912	ESF1	100	78.266	Otolemur_garnettii
ENSLAFG00000005479	ESF1	70	86.643	ENSOARG00000011158	ESF1	100	78.005	Ovis_aries
ENSLAFG00000005479	ESF1	100	81.722	ENSPPAG00000024379	ESF1	100	81.958	Pan_paniscus
ENSLAFG00000005479	ESF1	100	82.147	ENSPPRG00000012007	ESF1	100	82.030	Panthera_pardus
ENSLAFG00000005479	ESF1	100	82.126	ENSPTIG00000020063	ESF1	100	82.009	Panthera_tigris_altaica
ENSLAFG00000005479	ESF1	100	81.520	ENSPTRG00000013258	ESF1	100	82.105	Pan_troglodytes
ENSLAFG00000005479	ESF1	76	68.235	ENSPKIG00000024448	esf1	84	70.833	Paramormyrops_kingsleyae
ENSLAFG00000005479	ESF1	78	62.338	ENSPMGG00000016911	esf1	85	62.500	Periophthalmus_magnuspinnatus
ENSLAFG00000005479	ESF1	100	71.479	ENSPCIG00000019331	ESF1	100	71.243	Phascolarctos_cinereus
ENSLAFG00000005479	ESF1	81	60.811	ENSPFOG00000010101	esf1	91	62.500	Poecilia_formosa
ENSLAFG00000005479	ESF1	63	57.006	ENSPLAG00000006452	esf1	99	58.743	Poecilia_latipinna
ENSLAFG00000005479	ESF1	80	62.162	ENSPMEG00000000713	esf1	95	62.500	Poecilia_mexicana
ENSLAFG00000005479	ESF1	81	62.162	ENSPREG00000004431	esf1	91	62.500	Poecilia_reticulata
ENSLAFG00000005479	ESF1	100	81.871	ENSPPYG00000010715	ESF1	100	81.988	Pongo_abelii
ENSLAFG00000005479	ESF1	92	91.411	ENSPCAG00000006881	ESF1	100	81.213	Procavia_capensis
ENSLAFG00000005479	ESF1	84	94.444	ENSPVAG00000001295	ESF1	83	94.444	Pteropus_vampyrus
ENSLAFG00000005479	ESF1	81	66.234	ENSPNYG00000015735	esf1	99	66.667	Pundamilia_nyererei
ENSLAFG00000005479	ESF1	75	60.811	ENSPNAG00000014721	esf1	100	51.605	Pygocentrus_nattereri
ENSLAFG00000005479	ESF1	100	76.263	ENSRNOG00000004777	Esf1	100	76.851	Rattus_norvegicus
ENSLAFG00000005479	ESF1	100	80.891	ENSRBIG00000035763	ESF1	100	81.477	Rhinopithecus_bieti
ENSLAFG00000005479	ESF1	100	81.404	ENSRROG00000032022	ESF1	100	81.637	Rhinopithecus_roxellana
ENSLAFG00000005479	ESF1	59	34.104	YDR365C	-	73	34.971	Saccharomyces_cerevisiae
ENSLAFG00000005479	ESF1	100	81.360	ENSSBOG00000030387	ESF1	100	81.594	Saimiri_boliviensis_boliviensis
ENSLAFG00000005479	ESF1	100	70.853	ENSSHAG00000000449	ESF1	100	70.441	Sarcophilus_harrisii
ENSLAFG00000005479	ESF1	80	68.919	ENSSDUG00000019460	esf1	98	69.444	Seriola_dumerili
ENSLAFG00000005479	ESF1	100	62.620	ENSSPUG00000012635	ESF1	100	62.620	Sphenodon_punctatus
ENSLAFG00000005479	ESF1	76	70.130	ENSSPAG00000019077	esf1	92	69.444	Stegastes_partitus
ENSLAFG00000005479	ESF1	100	81.206	ENSSSCG00000007077	ESF1	100	81.323	Sus_scrofa
ENSLAFG00000005479	ESF1	100	58.430	ENSTGUG00000002450	ESF1	100	59.107	Taeniopygia_guttata
ENSLAFG00000005479	ESF1	82	63.636	ENSTRUG00000009445	esf1	91	63.889	Takifugu_rubripes
ENSLAFG00000005479	ESF1	73	89.051	ENSTBEG00000008552	ESF1	76	89.051	Tupaia_belangeri
ENSLAFG00000005479	ESF1	100	80.513	ENSTTRG00000005335	ESF1	100	80.863	Tursiops_truncatus
ENSLAFG00000005479	ESF1	100	80.796	ENSUMAG00000008579	ESF1	100	82.084	Ursus_maritimus
ENSLAFG00000005479	ESF1	100	76.443	ENSVPAG00000005291	ESF1	100	76.090	Vicugna_pacos
ENSLAFG00000005479	ESF1	100	81.221	ENSVVUG00000014318	ESF1	93	81.455	Vulpes_vulpes
ENSLAFG00000005479	ESF1	70	65.263	ENSXETG00000008079	esf1	100	58.680	Xenopus_tropicalis
ENSLAFG00000005479	ESF1	80	64.865	ENSXMAG00000017651	esf1	91	65.278	Xiphophorus_maculatus