EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000005520 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 20708 bases
Position: chrscaffold_65:11201111-11221818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000025221	Vault	PF01505.18	1.2e-45	1	4
ENSLAFP00000025221	Vault	PF01505.18	1.2e-45	2	4
ENSLAFP00000025221	Vault	PF01505.18	1.2e-45	3	4
ENSLAFP00000025221	Vault	PF01505.18	1.2e-45	4	4
ENSLAFP00000004631	Vault	PF01505.18	1.4e-45	1	4
ENSLAFP00000004631	Vault	PF01505.18	1.4e-45	2	4
ENSLAFP00000004631	Vault	PF01505.18	1.4e-45	3	4
ENSLAFP00000004631	Vault	PF01505.18	1.4e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000005520	-	2529	-	ENSLAFP00000004631	843 (aa)	-	G3SWE2
ENSLAFT00000035093	-	2562	-	ENSLAFP00000025221	854 (aa)	-	G3UBL3

Gene Model

Click here to download ENSLAFG00000005520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005520	-	100	86.458	ENSG00000013364	MVP	100	88.636	Homo_sapiens
ENSLAFG00000005520	-	99	64.368	ENSAPOG00000008671	mvp	97	64.828	Acanthochromis_polyacanthus
ENSLAFG00000005520	-	100	86.574	ENSAMEG00000014878	MVP	97	86.574	Ailuropoda_melanoleuca
ENSLAFG00000005520	-	99	67.417	ENSACIG00000024427	mvp	97	67.175	Amphilophus_citrinellus
ENSLAFG00000005520	-	59	70.363	ENSAOCG00000021379	mvp	88	70.363	Amphiprion_ocellaris
ENSLAFG00000005520	-	99	65.349	ENSAPEG00000007015	mvp	97	65.041	Amphiprion_percula
ENSLAFG00000005520	-	99	65.006	ENSATEG00000017429	mvp	97	65.353	Anabas_testudineus
ENSLAFG00000005520	-	99	68.080	ENSACAG00000014742	MVP	97	68.113	Anolis_carolinensis
ENSLAFG00000005520	-	100	85.764	ENSANAG00000025785	MVP	96	85.764	Aotus_nancymaae
ENSLAFG00000005520	-	98	71.976	ENSACLG00000016512	mvp	97	64.593	Astatotilapia_calliptera
ENSLAFG00000005520	-	99	65.389	ENSAMXG00000039149	mvp	97	65.389	Astyanax_mexicanus
ENSLAFG00000005520	-	100	85.764	ENSBTAG00000007952	MVP	97	85.764	Bos_taurus
ENSLAFG00000005520	-	100	85.648	ENSCJAG00000007166	MVP	96	85.648	Callithrix_jacchus
ENSLAFG00000005520	-	100	86.806	ENSCAFG00000016970	MVP	97	86.806	Canis_familiaris
ENSLAFG00000005520	-	100	86.806	ENSCAFG00020017730	MVP	97	86.806	Canis_lupus_dingo
ENSLAFG00000005520	-	100	85.648	ENSCHIG00000007963	MVP	97	85.648	Capra_hircus
ENSLAFG00000005520	-	99	86.635	ENSTSYG00000004093	MVP	96	85.648	Carlito_syrichta
ENSLAFG00000005520	-	100	79.167	ENSCAPG00000015186	MVP	97	79.167	Cavia_aperea
ENSLAFG00000005520	-	100	82.407	ENSCPOG00000007374	MVP	99	82.407	Cavia_porcellus
ENSLAFG00000005520	-	78	84.858	ENSCCAG00000026419	-	98	82.092	Cebus_capucinus
ENSLAFG00000005520	-	88	92.202	ENSCCAG00000033828	-	96	92.202	Cebus_capucinus
ENSLAFG00000005520	-	100	81.829	ENSCATG00000036298	MVP	96	81.829	Cercocebus_atys
ENSLAFG00000005520	-	100	82.523	ENSCLAG00000011381	MVP	97	82.523	Chinchilla_lanigera
ENSLAFG00000005520	-	100	86.343	ENSCSAG00000006120	MVP	96	86.343	Chlorocebus_sabaeus
ENSLAFG00000005520	-	99	61.019	ENSCING00000012198	-	97	61.366	Ciona_intestinalis
ENSLAFG00000005520	-	90	92.489	ENSCANG00000041427	MVP	95	92.489	Colobus_angolensis_palliatus
ENSLAFG00000005520	-	100	84.028	ENSCGRG00001015253	Mvp	99	84.028	Cricetulus_griseus_chok1gshd
ENSLAFG00000005520	-	100	84.028	ENSCGRG00000006655	Mvp	100	84.028	Cricetulus_griseus_crigri
ENSLAFG00000005520	-	99	62.946	ENSCSEG00000008233	mvp	94	63.437	Cynoglossus_semilaevis
ENSLAFG00000005520	-	99	64.352	ENSCVAG00000014286	mvp	96	64.352	Cyprinodon_variegatus
ENSLAFG00000005520	-	99	65.497	ENSDARG00000021242	mvp	97	65.497	Danio_rerio
ENSLAFG00000005520	-	100	85.930	ENSDNOG00000040061	MVP	98	86.047	Dasypus_novemcinctus
ENSLAFG00000005520	-	100	83.102	ENSDORG00000007996	Mvp	97	83.102	Dipodomys_ordii
ENSLAFG00000005520	-	91	86.052	ENSETEG00000004009	MVP	86	86.052	Echinops_telfairi
ENSLAFG00000005520	-	91	58.974	ENSEBUG00000003566	-	97	58.974	Eptatretus_burgeri
ENSLAFG00000005520	-	100	87.384	ENSEASG00005013194	MVP	98	87.427	Equus_asinus_asinus
ENSLAFG00000005520	-	99	88.304	ENSECAG00000025091	MVP	96	88.304	Equus_caballus
ENSLAFG00000005520	-	77	91.575	ENSEEUG00000015545	MVP	80	91.575	Erinaceus_europaeus
ENSLAFG00000005520	-	99	63.991	ENSELUG00000024149	mvp	99	64.571	Esox_lucius
ENSLAFG00000005520	-	100	87.037	ENSFCAG00000014153	MVP	97	87.037	Felis_catus
ENSLAFG00000005520	-	100	80.440	ENSFDAG00000007611	MVP	99	80.440	Fukomys_damarensis
ENSLAFG00000005520	-	82	67.412	ENSFHEG00000022085	mvp	96	68.525	Fundulus_heteroclitus
ENSLAFG00000005520	-	72	75.349	ENSGMOG00000018225	mvp	82	75.349	Gadus_morhua
ENSLAFG00000005520	-	99	64.527	ENSGALG00000040471	MVP	99	64.527	Gallus_gallus
ENSLAFG00000005520	-	99	63.615	ENSGAFG00000020182	mvp	98	63.731	Gambusia_affinis
ENSLAFG00000005520	-	99	61.655	ENSGACG00000015023	mvp	98	62.016	Gasterosteus_aculeatus
ENSLAFG00000005520	-	94	69.231	ENSGAGG00000018515	MVP	99	69.231	Gopherus_agassizii
ENSLAFG00000005520	-	100	86.458	ENSGGOG00000015603	MVP	96	86.458	Gorilla_gorilla
ENSLAFG00000005520	-	99	65.398	ENSHBUG00000019312	mvp	96	65.665	Haplochromis_burtoni
ENSLAFG00000005520	-	100	82.755	ENSHGLG00000019034	MVP	95	82.755	Heterocephalus_glaber_female
ENSLAFG00000005520	-	90	81.461	ENSHGLG00100017258	MVP	97	81.461	Heterocephalus_glaber_male
ENSLAFG00000005520	-	99	64.319	ENSHCOG00000002602	mvp	97	64.319	Hippocampus_comes
ENSLAFG00000005520	-	99	65.928	ENSIPUG00000002045	mvp	97	65.854	Ictalurus_punctatus
ENSLAFG00000005520	-	100	73.362	ENSSTOG00000001480	MVP	98	75.688	Ictidomys_tridecemlineatus
ENSLAFG00000005520	-	100	83.102	ENSJJAG00000015211	Mvp	97	83.102	Jaculus_jaculus
ENSLAFG00000005520	-	99	63.879	ENSKMAG00000009170	mvp	97	63.879	Kryptolebias_marmoratus
ENSLAFG00000005520	-	99	63.230	ENSLBEG00000012831	mvp	96	63.857	Labrus_bergylta
ENSLAFG00000005520	-	99	66.120	ENSLACG00000006862	MVP	99	65.429	Latimeria_chalumnae
ENSLAFG00000005520	-	100	86.458	ENSMFAG00000032090	MVP	96	86.458	Macaca_fascicularis
ENSLAFG00000005520	-	100	86.458	ENSMMUG00000016422	MVP	96	86.458	Macaca_mulatta
ENSLAFG00000005520	-	100	86.458	ENSMNEG00000039450	MVP	96	86.458	Macaca_nemestrina
ENSLAFG00000005520	-	100	86.343	ENSMLEG00000036661	MVP	96	86.343	Mandrillus_leucophaeus
ENSLAFG00000005520	-	99	63.678	ENSMAMG00000017792	mvp	96	64.311	Mastacembelus_armatus
ENSLAFG00000005520	-	99	65.513	ENSMZEG00005002831	mvp	96	65.780	Maylandia_zebra
ENSLAFG00000005520	-	99	60.585	ENSMGAG00000003200	MVP	93	71.939	Meleagris_gallopavo
ENSLAFG00000005520	-	100	83.912	ENSMAUG00000009864	Mvp	99	83.912	Mesocricetus_auratus
ENSLAFG00000005520	-	99	87.589	ENSMICG00000010206	MVP	96	86.698	Microcebus_murinus
ENSLAFG00000005520	-	100	84.144	ENSMOCG00000021967	Mvp	99	84.144	Microtus_ochrogaster
ENSLAFG00000005520	-	99	62.824	ENSMMOG00000012669	mvp	97	62.928	Mola_mola
ENSLAFG00000005520	-	98	79.241	ENSMODG00000015756	MVP	95	78.978	Monodelphis_domestica
ENSLAFG00000005520	-	91	64.750	ENSMALG00000019911	mvp	95	64.875	Monopterus_albus
ENSLAFG00000005520	-	100	83.912	MGP_CAROLIEiJ_G0030478	Mvp	99	83.912	Mus_caroli
ENSLAFG00000005520	-	100	83.912	ENSMUSG00000030681	Mvp	99	83.912	Mus_musculus
ENSLAFG00000005520	-	100	84.144	MGP_PahariEiJ_G0013688	Mvp	99	84.144	Mus_pahari
ENSLAFG00000005520	-	100	83.796	MGP_SPRETEiJ_G0031592	Mvp	99	83.796	Mus_spretus
ENSLAFG00000005520	-	99	86.972	ENSMPUG00000012462	MVP	86	86.095	Mustela_putorius_furo
ENSLAFG00000005520	-	100	77.382	ENSMLUG00000012898	MVP	97	77.382	Myotis_lucifugus
ENSLAFG00000005520	-	100	83.681	ENSNGAG00000012766	Mvp	98	83.681	Nannospalax_galili
ENSLAFG00000005520	-	100	87.554	ENSNLEG00000007564	-	87	87.554	Nomascus_leucogenys
ENSLAFG00000005520	-	88	81.006	ENSMEUG00000014942	MVP	90	81.006	Notamacropus_eugenii
ENSLAFG00000005520	-	99	84.353	ENSOPRG00000009511	MVP	96	83.624	Ochotona_princeps
ENSLAFG00000005520	-	99	76.218	ENSODEG00000015812	MVP	97	76.064	Octodon_degus
ENSLAFG00000005520	-	99	66.234	ENSONIG00000009362	mvp	99	66.234	Oreochromis_niloticus
ENSLAFG00000005520	-	99	78.512	ENSOANG00000007170	MVP	98	78.089	Ornithorhynchus_anatinus
ENSLAFG00000005520	-	99	84.570	ENSOCUG00000008668	MVP	96	83.953	Oryctolagus_cuniculus
ENSLAFG00000005520	-	99	62.708	ENSORLG00000019976	mvp	98	62.708	Oryzias_latipes
ENSLAFG00000005520	-	99	63.510	ENSORLG00020000633	mvp	98	62.313	Oryzias_latipes_hni
ENSLAFG00000005520	-	99	63.552	ENSOMEG00000020196	mvp	98	63.552	Oryzias_melastigma
ENSLAFG00000005520	-	100	82.543	ENSOGAG00000010511	MVP	96	82.428	Otolemur_garnettii
ENSLAFG00000005520	-	100	85.450	ENSOARG00000005356	MVP	97	85.450	Ovis_aries
ENSLAFG00000005520	-	100	81.829	ENSPPAG00000036492	MVP	96	81.829	Pan_paniscus
ENSLAFG00000005520	-	100	86.458	ENSPTRG00000007971	MVP	96	86.458	Pan_troglodytes
ENSLAFG00000005520	-	100	86.458	ENSPANG00000016369	MVP	96	86.458	Papio_anubis
ENSLAFG00000005520	-	99	59.763	ENSPKIG00000018322	mvp	98	59.763	Paramormyrops_kingsleyae
ENSLAFG00000005520	-	99	64.852	ENSPMGG00000006617	mvp	98	64.970	Periophthalmus_magnuspinnatus
ENSLAFG00000005520	-	99	84.000	ENSPEMG00000000532	Mvp	99	83.664	Peromyscus_maniculatus_bairdii
ENSLAFG00000005520	-	99	80.378	ENSPCIG00000025128	MVP	94	79.790	Phascolarctos_cinereus
ENSLAFG00000005520	-	99	64.079	ENSPFOG00000009770	mvp	96	64.195	Poecilia_formosa
ENSLAFG00000005520	-	59	60.484	ENSPLAG00000016176	mvp	73	68.000	Poecilia_latipinna
ENSLAFG00000005520	-	99	64.311	ENSPMEG00000009616	mvp	96	64.426	Poecilia_mexicana
ENSLAFG00000005520	-	99	63.889	ENSPREG00000011953	mvp	96	64.120	Poecilia_reticulata
ENSLAFG00000005520	-	99	87.633	ENSPPYG00000007257	-	98	86.744	Pongo_abelii
ENSLAFG00000005520	-	100	82.060	ENSPPYG00000019352	-	96	82.060	Pongo_abelii
ENSLAFG00000005520	-	78	96.313	ENSPCAG00000010750	MVP	75	96.313	Procavia_capensis
ENSLAFG00000005520	-	100	86.921	ENSPCOG00000007547	MVP	96	86.921	Propithecus_coquereli
ENSLAFG00000005520	-	100	84.144	ENSPVAG00000017213	MVP	96	84.144	Pteropus_vampyrus
ENSLAFG00000005520	-	99	68.100	ENSPNYG00000012193	mvp	98	68.100	Pundamilia_nyererei
ENSLAFG00000005520	-	99	65.581	ENSPNAG00000004713	mvp	97	65.734	Pygocentrus_nattereri
ENSLAFG00000005520	-	100	83.681	ENSRNOG00000020182	Mvp	99	83.681	Rattus_norvegicus
ENSLAFG00000005520	-	100	83.065	ENSRBIG00000032912	MVP	96	83.065	Rhinopithecus_bieti
ENSLAFG00000005520	-	100	86.227	ENSRROG00000032290	MVP	96	86.227	Rhinopithecus_roxellana
ENSLAFG00000005520	-	100	85.648	ENSSBOG00000022115	MVP	96	85.648	Saimiri_boliviensis_boliviensis
ENSLAFG00000005520	-	99	78.026	ENSSHAG00000009673	MVP	98	77.584	Sarcophilus_harrisii
ENSLAFG00000005520	-	99	63.552	ENSSFOG00015001397	mvp	97	63.552	Scleropages_formosus
ENSLAFG00000005520	-	99	63.114	ENSSMAG00000014869	mvp	99	63.114	Scophthalmus_maximus
ENSLAFG00000005520	-	99	65.777	ENSSDUG00000006071	mvp	97	65.063	Seriola_dumerili
ENSLAFG00000005520	-	65	91.018	ENSSARG00000013146	-	79	91.018	Sorex_araneus
ENSLAFG00000005520	-	99	69.112	ENSSPUG00000010594	MVP	99	68.743	Sphenodon_punctatus
ENSLAFG00000005520	-	99	65.081	ENSSPAG00000018918	mvp	97	65.157	Stegastes_partitus
ENSLAFG00000005520	-	99	87.470	ENSSSCG00000027946	MVP	95	86.195	Sus_scrofa
ENSLAFG00000005520	-	99	65.398	ENSTRUG00000000022	mvp	97	65.403	Takifugu_rubripes
ENSLAFG00000005520	-	55	62.422	ENSTNIG00000006502	mvp	97	62.422	Tetraodon_nigroviridis
ENSLAFG00000005520	-	93	93.516	ENSTBEG00000007045	MVP	90	93.516	Tupaia_belangeri
ENSLAFG00000005520	-	100	85.301	ENSTTRG00000005451	MVP	97	85.301	Tursiops_truncatus
ENSLAFG00000005520	-	100	86.806	ENSVVUG00000026093	MVP	97	86.806	Vulpes_vulpes
ENSLAFG00000005520	-	96	65.738	ENSXETG00000004670	mvp	99	65.083	Xenopus_tropicalis
ENSLAFG00000005520	-	88	67.869	ENSXCOG00000004286	mvp	96	67.869	Xiphophorus_couchianus
ENSLAFG00000005520	-	99	63.793	ENSXMAG00000009640	mvp	95	69.360	Xiphophorus_maculatus