EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000005999 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 45480 bases
Position: chrscaffold_6:61557656-61603135
Accession: 100674036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000027008	MIF4G_like	PF09088.11	7.7e-37	1	1
ENSLAFP00000005031	MIF4G_like	PF09088.11	7.7e-37	1	1
ENSLAFP00000005031	MIF4G_like_2	PF09090.11	1.4e-84	1	1
ENSLAFP00000027008	MIF4G_like_2	PF09090.11	1.4e-84	1	1
ENSLAFP00000005031	MIF4G	PF02854.19	3.2e-31	1	1
ENSLAFP00000027008	MIF4G	PF02854.19	3.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000026181	NCBP1-201	2373	-	ENSLAFP00000027008	790 (aa)	-	G3UGQ0
ENSLAFT00000005999	NCBP1-202	2370	-	ENSLAFP00000005031	790 (aa)	XP_003407893	G3SXB3

Gene Model

Click here to download ENSLAFG00000005999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000005999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000005999	NCBP1	100	98.861	ENSG00000136937	NCBP1	100	98.861	Homo_sapiens
ENSLAFG00000005999	NCBP1	99	83.375	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
ENSLAFG00000005999	NCBP1	100	98.864	ENSAMEG00000004763	NCBP1	100	98.864	Ailuropoda_melanoleuca
ENSLAFG00000005999	NCBP1	99	83.733	ENSACIG00000000274	NCBP1	99	83.102	Amphilophus_citrinellus
ENSLAFG00000005999	NCBP1	99	83.501	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
ENSLAFG00000005999	NCBP1	99	83.501	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
ENSLAFG00000005999	NCBP1	99	83.249	ENSATEG00000006929	NCBP1	99	82.872	Anabas_testudineus
ENSLAFG00000005999	NCBP1	95	90.225	ENSAPLG00000016318	NCBP1	100	90.357	Anas_platyrhynchos
ENSLAFG00000005999	NCBP1	100	86.642	ENSACAG00000004409	NCBP1	87	86.517	Anolis_carolinensis
ENSLAFG00000005999	NCBP1	100	95.949	ENSANAG00000025744	NCBP1	99	98.881	Aotus_nancymaae
ENSLAFG00000005999	NCBP1	99	82.997	ENSACLG00000014812	NCBP1	99	82.821	Astatotilapia_calliptera
ENSLAFG00000005999	NCBP1	99	81.658	ENSAMXG00000016364	NCBP1	99	81.156	Astyanax_mexicanus
ENSLAFG00000005999	NCBP1	100	98.481	ENSBTAG00000009732	NCBP1	100	98.481	Bos_taurus
ENSLAFG00000005999	NCBP1	99	34.649	WBGene00018156	ncbp-1	99	34.155	Caenorhabditis_elegans
ENSLAFG00000005999	NCBP1	100	98.861	ENSCJAG00000010840	NCBP1	100	99.119	Callithrix_jacchus
ENSLAFG00000005999	NCBP1	100	98.987	ENSCAFG00000002445	NCBP1	100	98.987	Canis_familiaris
ENSLAFG00000005999	NCBP1	99	98.720	ENSCAFG00020017997	NCBP1	100	98.829	Canis_lupus_dingo
ENSLAFG00000005999	NCBP1	100	98.228	ENSCHIG00000020139	NCBP1	100	98.228	Capra_hircus
ENSLAFG00000005999	NCBP1	52	97.317	ENSTSYG00000011914	NCBP1	98	99.060	Carlito_syrichta
ENSLAFG00000005999	NCBP1	88	83.526	ENSCAPG00000014252	NCBP1	95	83.382	Cavia_aperea
ENSLAFG00000005999	NCBP1	97	96.871	ENSCPOG00000012573	NCBP1	99	96.871	Cavia_porcellus
ENSLAFG00000005999	NCBP1	100	98.987	ENSCCAG00000032297	NCBP1	100	98.987	Cebus_capucinus
ENSLAFG00000005999	NCBP1	100	98.861	ENSCATG00000010052	NCBP1	100	98.861	Cercocebus_atys
ENSLAFG00000005999	NCBP1	100	98.861	ENSCLAG00000014339	NCBP1	100	98.861	Chinchilla_lanigera
ENSLAFG00000005999	NCBP1	100	98.861	ENSCSAG00000010929	NCBP1	100	98.861	Chlorocebus_sabaeus
ENSLAFG00000005999	NCBP1	91	95.763	ENSCHOG00000010332	NCBP1	91	95.763	Choloepus_hoffmanni
ENSLAFG00000005999	NCBP1	100	85.786	ENSCPBG00000024344	NCBP1	99	90.278	Chrysemys_picta_bellii
ENSLAFG00000005999	NCBP1	99	54.188	ENSCING00000008990	-	99	53.982	Ciona_intestinalis
ENSLAFG00000005999	NCBP1	99	53.199	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSLAFG00000005999	NCBP1	100	98.861	ENSCANG00000036913	NCBP1	100	98.861	Colobus_angolensis_palliatus
ENSLAFG00000005999	NCBP1	100	97.975	ENSCGRG00001015771	Ncbp1	100	97.975	Cricetulus_griseus_chok1gshd
ENSLAFG00000005999	NCBP1	99	98.077	ENSCGRG00000010311	Ncbp1	100	98.077	Cricetulus_griseus_crigri
ENSLAFG00000005999	NCBP1	99	82.746	ENSCSEG00000012377	NCBP1	99	83.077	Cynoglossus_semilaevis
ENSLAFG00000005999	NCBP1	99	80.755	ENSCVAG00000008795	NCBP1	99	81.384	Cyprinodon_variegatus
ENSLAFG00000005999	NCBP1	100	97.975	ENSDNOG00000006885	NCBP1	100	97.975	Dasypus_novemcinctus
ENSLAFG00000005999	NCBP1	100	93.703	ENSDORG00000013652	Ncbp1	100	93.703	Dipodomys_ordii
ENSLAFG00000005999	NCBP1	100	57.267	FBgn0022942	Cbp80	100	57.750	Drosophila_melanogaster
ENSLAFG00000005999	NCBP1	84	33.724	FBgn0038887	CG7907	87	33.724	Drosophila_melanogaster
ENSLAFG00000005999	NCBP1	89	94.541	ENSETEG00000009705	NCBP1	89	94.541	Echinops_telfairi
ENSLAFG00000005999	NCBP1	100	73.836	ENSEBUG00000008386	NCBP1	100	73.585	Eptatretus_burgeri
ENSLAFG00000005999	NCBP1	100	98.481	ENSEASG00005022795	NCBP1	100	98.481	Equus_asinus_asinus
ENSLAFG00000005999	NCBP1	100	98.608	ENSECAG00000013847	NCBP1	100	98.608	Equus_caballus
ENSLAFG00000005999	NCBP1	95	93.625	ENSEEUG00000015973	NCBP1	99	93.227	Erinaceus_europaeus
ENSLAFG00000005999	NCBP1	99	80.755	ENSELUG00000022519	NCBP1	99	81.509	Esox_lucius
ENSLAFG00000005999	NCBP1	100	98.861	ENSFCAG00000001206	NCBP1	100	98.861	Felis_catus
ENSLAFG00000005999	NCBP1	98	89.059	ENSFALG00000001193	NCBP1	100	89.186	Ficedula_albicollis
ENSLAFG00000005999	NCBP1	100	98.608	ENSFDAG00000010864	NCBP1	100	98.608	Fukomys_damarensis
ENSLAFG00000005999	NCBP1	99	82.264	ENSFHEG00000000655	NCBP1	99	81.761	Fundulus_heteroclitus
ENSLAFG00000005999	NCBP1	99	79.497	ENSGMOG00000008653	NCBP1	99	79.497	Gadus_morhua
ENSLAFG00000005999	NCBP1	98	90.244	ENSGALG00000002087	NCBP1	100	89.912	Gallus_gallus
ENSLAFG00000005999	NCBP1	99	82.763	ENSGAFG00000017787	NCBP1	99	82.636	Gambusia_affinis
ENSLAFG00000005999	NCBP1	99	82.309	ENSGACG00000016772	NCBP1	98	81.932	Gasterosteus_aculeatus
ENSLAFG00000005999	NCBP1	100	88.428	ENSGAGG00000019483	NCBP1	99	90.000	Gopherus_agassizii
ENSLAFG00000005999	NCBP1	100	98.861	ENSGGOG00000001376	NCBP1	100	98.861	Gorilla_gorilla
ENSLAFG00000005999	NCBP1	99	82.997	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
ENSLAFG00000005999	NCBP1	100	98.734	ENSHGLG00000001882	NCBP1	100	98.734	Heterocephalus_glaber_female
ENSLAFG00000005999	NCBP1	100	86.111	ENSHGLG00000018112	-	100	86.111	Heterocephalus_glaber_female
ENSLAFG00000005999	NCBP1	100	98.734	ENSHGLG00100013014	NCBP1	100	98.734	Heterocephalus_glaber_male
ENSLAFG00000005999	NCBP1	100	85.859	ENSHGLG00100017373	-	100	85.859	Heterocephalus_glaber_male
ENSLAFG00000005999	NCBP1	79	72.222	ENSHCOG00000000204	NCBP1	92	72.222	Hippocampus_comes
ENSLAFG00000005999	NCBP1	99	82.264	ENSIPUG00000007275	ncbp1	99	81.887	Ictalurus_punctatus
ENSLAFG00000005999	NCBP1	100	98.734	ENSSTOG00000002695	NCBP1	100	98.734	Ictidomys_tridecemlineatus
ENSLAFG00000005999	NCBP1	99	82.368	ENSKMAG00000003594	NCBP1	99	86.382	Kryptolebias_marmoratus
ENSLAFG00000005999	NCBP1	99	81.242	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSLAFG00000005999	NCBP1	100	80.348	ENSLACG00000013955	NCBP1	100	79.851	Latimeria_chalumnae
ENSLAFG00000005999	NCBP1	99	72.195	ENSLOCG00000009579	NCBP1	99	72.195	Lepisosteus_oculatus
ENSLAFG00000005999	NCBP1	100	98.861	ENSMFAG00000030994	NCBP1	100	98.861	Macaca_fascicularis
ENSLAFG00000005999	NCBP1	99	98.845	ENSMMUG00000012281	NCBP1	99	98.845	Macaca_mulatta
ENSLAFG00000005999	NCBP1	100	98.861	ENSMNEG00000042790	NCBP1	100	98.861	Macaca_nemestrina
ENSLAFG00000005999	NCBP1	100	98.861	ENSMLEG00000030374	NCBP1	100	98.861	Mandrillus_leucophaeus
ENSLAFG00000005999	NCBP1	99	83.375	ENSMAMG00000014806	NCBP1	99	82.872	Mastacembelus_armatus
ENSLAFG00000005999	NCBP1	97	82.552	ENSMZEG00005009290	-	99	82.422	Maylandia_zebra
ENSLAFG00000005999	NCBP1	99	82.997	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
ENSLAFG00000005999	NCBP1	99	97.583	ENSMAUG00000020583	Ncbp1	99	97.583	Mesocricetus_auratus
ENSLAFG00000005999	NCBP1	100	98.734	ENSMICG00000012682	NCBP1	100	98.734	Microcebus_murinus
ENSLAFG00000005999	NCBP1	100	97.595	ENSMOCG00000015818	Ncbp1	100	97.595	Microtus_ochrogaster
ENSLAFG00000005999	NCBP1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSLAFG00000005999	NCBP1	100	93.418	ENSMODG00000003202	NCBP1	99	93.165	Monodelphis_domestica
ENSLAFG00000005999	NCBP1	99	82.620	ENSMALG00000003547	NCBP1	99	82.116	Monopterus_albus
ENSLAFG00000005999	NCBP1	100	97.595	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.595	Mus_caroli
ENSLAFG00000005999	NCBP1	100	97.595	ENSMUSG00000028330	Ncbp1	100	97.595	Mus_musculus
ENSLAFG00000005999	NCBP1	100	97.848	MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	Mus_pahari
ENSLAFG00000005999	NCBP1	100	97.595	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.595	Mus_spretus
ENSLAFG00000005999	NCBP1	100	98.861	ENSMPUG00000006399	NCBP1	100	98.861	Mustela_putorius_furo
ENSLAFG00000005999	NCBP1	99	97.433	ENSMLUG00000015201	NCBP1	100	97.433	Myotis_lucifugus
ENSLAFG00000005999	NCBP1	100	97.848	ENSNGAG00000014101	Ncbp1	100	97.848	Nannospalax_galili
ENSLAFG00000005999	NCBP1	76	86.344	ENSNBRG00000014674	NCBP1	97	86.344	Neolamprologus_brichardi
ENSLAFG00000005999	NCBP1	100	98.861	ENSNLEG00000016909	NCBP1	100	98.861	Nomascus_leucogenys
ENSLAFG00000005999	NCBP1	89	94.595	ENSMEUG00000010672	NCBP1	90	92.342	Notamacropus_eugenii
ENSLAFG00000005999	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSLAFG00000005999	NCBP1	100	98.608	ENSODEG00000003232	NCBP1	100	98.608	Octodon_degus
ENSLAFG00000005999	NCBP1	99	82.997	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
ENSLAFG00000005999	NCBP1	79	95.024	ENSOANG00000001918	NCBP1	100	95.024	Ornithorhynchus_anatinus
ENSLAFG00000005999	NCBP1	98	97.943	ENSOCUG00000013853	NCBP1	97	97.943	Oryctolagus_cuniculus
ENSLAFG00000005999	NCBP1	99	81.078	ENSORLG00000011008	NCBP1	99	80.702	Oryzias_latipes
ENSLAFG00000005999	NCBP1	99	81.078	ENSORLG00020017455	NCBP1	99	80.702	Oryzias_latipes_hni
ENSLAFG00000005999	NCBP1	99	81.203	ENSORLG00015012127	NCBP1	99	80.827	Oryzias_latipes_hsok
ENSLAFG00000005999	NCBP1	99	81.704	ENSOMEG00000020698	NCBP1	99	81.579	Oryzias_melastigma
ENSLAFG00000005999	NCBP1	100	98.864	ENSOGAG00000013888	NCBP1	100	98.864	Otolemur_garnettii
ENSLAFG00000005999	NCBP1	100	98.228	ENSOARG00000011233	NCBP1	100	98.228	Ovis_aries
ENSLAFG00000005999	NCBP1	100	98.861	ENSPPAG00000026462	NCBP1	100	98.861	Pan_paniscus
ENSLAFG00000005999	NCBP1	100	98.987	ENSPPRG00000022574	NCBP1	100	98.987	Panthera_pardus
ENSLAFG00000005999	NCBP1	100	98.987	ENSPTIG00000018507	NCBP1	100	98.987	Panthera_tigris_altaica
ENSLAFG00000005999	NCBP1	100	98.861	ENSPTRG00000021167	NCBP1	100	98.861	Pan_troglodytes
ENSLAFG00000005999	NCBP1	100	98.861	ENSPANG00000025591	NCBP1	100	98.861	Papio_anubis
ENSLAFG00000005999	NCBP1	100	80.881	ENSPKIG00000015861	NCBP1	100	80.755	Paramormyrops_kingsleyae
ENSLAFG00000005999	NCBP1	64	88.867	ENSPSIG00000009558	NCBP1	100	89.062	Pelodiscus_sinensis
ENSLAFG00000005999	NCBP1	99	79.597	ENSPMGG00000020476	NCBP1	99	79.093	Periophthalmus_magnuspinnatus
ENSLAFG00000005999	NCBP1	100	97.468	ENSPEMG00000020105	Ncbp1	100	97.468	Peromyscus_maniculatus_bairdii
ENSLAFG00000005999	NCBP1	100	67.497	ENSPMAG00000005533	NCBP1	100	67.497	Petromyzon_marinus
ENSLAFG00000005999	NCBP1	100	93.165	ENSPCIG00000015800	NCBP1	99	94.512	Phascolarctos_cinereus
ENSLAFG00000005999	NCBP1	99	81.955	ENSPFOG00000004158	NCBP1	99	81.579	Poecilia_formosa
ENSLAFG00000005999	NCBP1	99	82.390	ENSPLAG00000020002	NCBP1	99	82.013	Poecilia_latipinna
ENSLAFG00000005999	NCBP1	99	82.390	ENSPMEG00000019821	NCBP1	99	82.013	Poecilia_mexicana
ENSLAFG00000005999	NCBP1	99	82.286	ENSPREG00000006035	NCBP1	99	81.910	Poecilia_reticulata
ENSLAFG00000005999	NCBP1	100	98.861	ENSPPYG00000019426	NCBP1	100	98.861	Pongo_abelii
ENSLAFG00000005999	NCBP1	85	99.655	ENSPCAG00000009943	NCBP1	85	99.655	Procavia_capensis
ENSLAFG00000005999	NCBP1	82	98.780	ENSPCOG00000020024	NCBP1	98	98.780	Propithecus_coquereli
ENSLAFG00000005999	NCBP1	100	98.481	ENSPVAG00000005924	NCBP1	100	98.481	Pteropus_vampyrus
ENSLAFG00000005999	NCBP1	91	82.961	ENSPNYG00000002140	NCBP1	99	82.821	Pundamilia_nyererei
ENSLAFG00000005999	NCBP1	99	82.412	ENSPNAG00000027753	NCBP1	99	81.784	Pygocentrus_nattereri
ENSLAFG00000005999	NCBP1	100	97.722	ENSRNOG00000023605	Ncbp1	100	97.722	Rattus_norvegicus
ENSLAFG00000005999	NCBP1	100	98.861	ENSRBIG00000043175	NCBP1	100	98.861	Rhinopithecus_bieti
ENSLAFG00000005999	NCBP1	100	98.861	ENSRROG00000029767	NCBP1	100	98.861	Rhinopithecus_roxellana
ENSLAFG00000005999	NCBP1	100	98.987	ENSSBOG00000019378	NCBP1	100	98.987	Saimiri_boliviensis_boliviensis
ENSLAFG00000005999	NCBP1	69	95.331	ENSSHAG00000015882	NCBP1	73	95.331	Sarcophilus_harrisii
ENSLAFG00000005999	NCBP1	99	81.130	ENSSFOG00015001872	NCBP1	100	80.380	Scleropages_formosus
ENSLAFG00000005999	NCBP1	99	81.738	ENSSMAG00000007463	NCBP1	99	81.486	Scophthalmus_maximus
ENSLAFG00000005999	NCBP1	99	83.270	ENSSDUG00000007019	NCBP1	100	82.853	Seriola_dumerili
ENSLAFG00000005999	NCBP1	99	82.997	ENSSLDG00000021924	NCBP1	99	82.620	Seriola_lalandi_dorsalis
ENSLAFG00000005999	NCBP1	85	90.393	ENSSARG00000007274	NCBP1	87	90.393	Sorex_araneus
ENSLAFG00000005999	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSLAFG00000005999	NCBP1	99	83.249	ENSSPAG00000012550	NCBP1	99	82.872	Stegastes_partitus
ENSLAFG00000005999	NCBP1	100	98.734	ENSSSCG00000005366	NCBP1	100	98.734	Sus_scrofa
ENSLAFG00000005999	NCBP1	100	83.522	ENSTGUG00000001472	NCBP1	100	83.648	Taeniopygia_guttata
ENSLAFG00000005999	NCBP1	99	81.990	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSLAFG00000005999	NCBP1	100	95.570	ENSTBEG00000004035	NCBP1	100	95.570	Tupaia_belangeri
ENSLAFG00000005999	NCBP1	88	99.015	ENSTTRG00000000507	NCBP1	88	99.015	Tursiops_truncatus
ENSLAFG00000005999	NCBP1	100	98.861	ENSUAMG00000005471	NCBP1	100	98.861	Ursus_americanus
ENSLAFG00000005999	NCBP1	97	96.489	ENSUMAG00000011865	NCBP1	100	98.829	Ursus_maritimus
ENSLAFG00000005999	NCBP1	100	94.557	ENSVPAG00000010537	NCBP1	100	94.557	Vicugna_pacos
ENSLAFG00000005999	NCBP1	100	98.987	ENSVVUG00000019725	NCBP1	100	98.987	Vulpes_vulpes
ENSLAFG00000005999	NCBP1	100	81.037	ENSXETG00000010179	ncbp1	100	81.037	Xenopus_tropicalis
ENSLAFG00000005999	NCBP1	99	82.516	ENSXMAG00000018253	NCBP1	99	82.138	Xiphophorus_maculatus