EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000006186 (Gene tree)
Gene ID: -
Gene Symbol: DDX50
Alias: GU2|GUB|MGC3199|RH-II/GuB
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 39736 bases
Position: chrscaffold_10:50475791-50515526
Accession: 100676032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005192	GUCT	PF08152.12	1.4e-28	1	1
ENSLAFP00000005192	ResIII	PF04851.15	4.1e-10	1	1
ENSLAFP00000005192	DEAD	PF00270.29	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000006188	DDX50-201	2205	-	ENSLAFP00000005192	734 (aa)	XP_003409349	G3SXP9

Gene Model

Click here to download ENSLAFG00000006186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006186's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000006186	DDX50	51	31.910	ENSLAFG00000015474	DDX47	77	32.880
ENSLAFG00000006186	DDX50	54	30.361	ENSLAFG00000007293	DDX55	68	30.120
ENSLAFG00000006186	DDX50	50	33.422	ENSLAFG00000005951	DDX10	57	33.245
ENSLAFG00000006186	DDX50	55	33.806	ENSLAFG00000012190	DDX27	52	33.570
ENSLAFG00000006186	DDX50	87	61.715	ENSLAFG00000007962	DDX21	76	64.765
ENSLAFG00000006186	DDX50	50	32.533	ENSLAFG00000001107	EIF4A1	88	31.989
ENSLAFG00000006186	DDX50	62	32.688	ENSLAFG00000006915	DDX18	54	34.933
ENSLAFG00000006186	DDX50	50	31.536	ENSLAFG00000003619	EIF4A2	87	31.536
ENSLAFG00000006186	DDX50	50	32.888	ENSLAFG00000015628	EIF4A3	86	32.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006186	DDX50	100	97.965	ENSG00000107625	DDX50	100	97.965	Homo_sapiens
ENSLAFG00000006186	DDX50	100	96.748	ENSAMEG00000017992	DDX50	100	96.748	Ailuropoda_melanoleuca
ENSLAFG00000006186	DDX50	92	78.292	ENSANAG00000017785	-	91	78.292	Aotus_nancymaae
ENSLAFG00000006186	DDX50	100	96.744	ENSBTAG00000033413	DDX50	100	96.744	Bos_taurus
ENSLAFG00000006186	DDX50	100	97.965	ENSCJAG00000018844	DDX50	100	97.965	Callithrix_jacchus
ENSLAFG00000006186	DDX50	100	96.883	ENSCAFG00000013776	DDX50	100	96.883	Canis_familiaris
ENSLAFG00000006186	DDX50	100	96.883	ENSCAFG00020025977	DDX50	99	96.883	Canis_lupus_dingo
ENSLAFG00000006186	DDX50	100	96.065	ENSCHIG00000000285	DDX50	92	97.198	Capra_hircus
ENSLAFG00000006186	DDX50	100	97.015	ENSTSYG00000004192	DDX50	100	97.015	Carlito_syrichta
ENSLAFG00000006186	DDX50	100	77.612	ENSCAPG00000007230	-	100	77.612	Cavia_aperea
ENSLAFG00000006186	DDX50	100	95.929	ENSCPOG00000002131	-	100	95.929	Cavia_porcellus
ENSLAFG00000006186	DDX50	91	88.235	ENSCCAG00000030543	DDX50	100	88.235	Cebus_capucinus
ENSLAFG00000006186	DDX50	99	95.380	ENSCATG00000032463	DDX50	99	95.380	Cercocebus_atys
ENSLAFG00000006186	DDX50	92	67.789	ENSCATG00000039259	-	89	67.988	Cercocebus_atys
ENSLAFG00000006186	DDX50	98	72.879	ENSCATG00000035153	-	89	89.969	Cercocebus_atys
ENSLAFG00000006186	DDX50	50	86.721	ENSCLAG00000001553	-	79	88.710	Chinchilla_lanigera
ENSLAFG00000006186	DDX50	100	97.015	ENSCLAG00000012957	-	100	97.015	Chinchilla_lanigera
ENSLAFG00000006186	DDX50	97	69.382	ENSCLAG00000001938	-	91	71.516	Chinchilla_lanigera
ENSLAFG00000006186	DDX50	100	97.965	ENSCSAG00000007703	DDX50	100	97.965	Chlorocebus_sabaeus
ENSLAFG00000006186	DDX50	91	95.202	ENSCHOG00000000233	DDX50	100	95.202	Choloepus_hoffmanni
ENSLAFG00000006186	DDX50	86	71.361	ENSCANG00000018820	-	88	73.043	Colobus_angolensis_palliatus
ENSLAFG00000006186	DDX50	100	84.125	ENSCANG00000036450	-	100	84.125	Colobus_angolensis_palliatus
ENSLAFG00000006186	DDX50	96	69.663	ENSCANG00000028077	-	91	68.960	Colobus_angolensis_palliatus
ENSLAFG00000006186	DDX50	92	96.018	ENSCGRG00001020223	Ddx50	92	96.018	Cricetulus_griseus_chok1gshd
ENSLAFG00000006186	DDX50	92	96.148	ENSCGRG00000015884	Ddx50	92	96.018	Cricetulus_griseus_crigri
ENSLAFG00000006186	DDX50	88	90.432	ENSDNOG00000001675	DDX50	100	90.432	Dasypus_novemcinctus
ENSLAFG00000006186	DDX50	92	96.165	ENSDORG00000007310	Ddx50	92	96.165	Dipodomys_ordii
ENSLAFG00000006186	DDX50	90	98.664	ENSETEG00000014069	DDX50	90	98.664	Echinops_telfairi
ENSLAFG00000006186	DDX50	100	96.472	ENSEASG00005015595	DDX50	99	96.472	Equus_asinus_asinus
ENSLAFG00000006186	DDX50	100	96.608	ENSECAG00000023044	DDX50	99	96.608	Equus_caballus
ENSLAFG00000006186	DDX50	89	94.400	ENSEEUG00000005782	DDX50	81	98.236	Erinaceus_europaeus
ENSLAFG00000006186	DDX50	100	97.154	ENSFCAG00000012678	DDX50	99	97.154	Felis_catus
ENSLAFG00000006186	DDX50	92	90.118	ENSFDAG00000016109	-	91	90.118	Fukomys_damarensis
ENSLAFG00000006186	DDX50	52	71.391	ENSGGOG00000022568	-	90	79.503	Gorilla_gorilla
ENSLAFG00000006186	DDX50	100	97.965	ENSGGOG00000010100	DDX50	100	97.965	Gorilla_gorilla
ENSLAFG00000006186	DDX50	51	83.467	ENSGGOG00000041063	-	82	85.266	Gorilla_gorilla
ENSLAFG00000006186	DDX50	92	95.575	ENSHGLG00000013466	DDX50	92	95.575	Heterocephalus_glaber_female
ENSLAFG00000006186	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSLAFG00000006186	DDX50	92	95.575	ENSHGLG00100017191	DDX50	92	95.575	Heterocephalus_glaber_male
ENSLAFG00000006186	DDX50	100	94.715	ENSSTOG00000021852	-	100	94.715	Ictidomys_tridecemlineatus
ENSLAFG00000006186	DDX50	100	93.487	ENSJJAG00000023928	-	92	94.543	Jaculus_jaculus
ENSLAFG00000006186	DDX50	100	72.605	ENSJJAG00000019626	-	91	73.835	Jaculus_jaculus
ENSLAFG00000006186	DDX50	98	72.462	ENSMFAG00000045339	-	89	89.028	Macaca_fascicularis
ENSLAFG00000006186	DDX50	100	97.965	ENSMFAG00000044067	DDX50	100	97.965	Macaca_fascicularis
ENSLAFG00000006186	DDX50	100	97.965	ENSMMUG00000001006	DDX50	100	98.214	Macaca_mulatta
ENSLAFG00000006186	DDX50	80	68.305	ENSMMUG00000045343	-	80	67.966	Macaca_mulatta
ENSLAFG00000006186	DDX50	92	91.593	ENSMNEG00000031664	DDX50	92	91.593	Macaca_nemestrina
ENSLAFG00000006186	DDX50	98	73.546	ENSMNEG00000045530	-	89	90.282	Macaca_nemestrina
ENSLAFG00000006186	DDX50	86	84.706	ENSMLEG00000041988	-	89	87.855	Mandrillus_leucophaeus
ENSLAFG00000006186	DDX50	100	96.201	ENSMLEG00000037313	DDX50	100	96.201	Mandrillus_leucophaeus
ENSLAFG00000006186	DDX50	56	94.431	ENSMAUG00000022192	Ddx50	100	94.431	Mesocricetus_auratus
ENSLAFG00000006186	DDX50	100	89.417	ENSMICG00000017539	DDX50	100	89.417	Microcebus_murinus
ENSLAFG00000006186	DDX50	92	95.441	ENSMOCG00000001676	Ddx50	92	95.000	Microtus_ochrogaster
ENSLAFG00000006186	DDX50	92	80.205	ENSMODG00000010741	DDX50	92	80.758	Monodelphis_domestica
ENSLAFG00000006186	DDX50	92	94.543	MGP_CAROLIEiJ_G0015389	Ddx50	92	95.133	Mus_caroli
ENSLAFG00000006186	DDX50	92	94.985	ENSMUSG00000020076	Ddx50	92	95.575	Mus_musculus
ENSLAFG00000006186	DDX50	92	95.133	MGP_PahariEiJ_G0030805	Ddx50	92	95.723	Mus_pahari
ENSLAFG00000006186	DDX50	92	94.985	MGP_SPRETEiJ_G0016200	Ddx50	92	95.575	Mus_spretus
ENSLAFG00000006186	DDX50	88	96.605	ENSMPUG00000004589	DDX50	99	96.605	Mustela_putorius_furo
ENSLAFG00000006186	DDX50	92	95.723	ENSMLUG00000017590	DDX50	92	95.723	Myotis_lucifugus
ENSLAFG00000006186	DDX50	100	96.201	ENSNGAG00000004283	Ddx50	100	96.201	Nannospalax_galili
ENSLAFG00000006186	DDX50	85	69.059	ENSNLEG00000035506	-	88	78.193	Nomascus_leucogenys
ENSLAFG00000006186	DDX50	100	97.965	ENSNLEG00000011631	DDX50	100	97.965	Nomascus_leucogenys
ENSLAFG00000006186	DDX50	92	93.658	ENSOPRG00000001619	DDX50	92	94.248	Ochotona_princeps
ENSLAFG00000006186	DDX50	92	96.018	ENSODEG00000014597	-	92	96.313	Octodon_degus
ENSLAFG00000006186	DDX50	93	67.001	ENSOANG00000004776	DDX50	76	72.027	Ornithorhynchus_anatinus
ENSLAFG00000006186	DDX50	95	94.524	ENSOCUG00000002879	DDX50	95	95.575	Oryctolagus_cuniculus
ENSLAFG00000006186	DDX50	100	97.015	ENSOGAG00000001844	DDX50	100	97.015	Otolemur_garnettii
ENSLAFG00000006186	DDX50	100	96.065	ENSOARG00000005264	DDX50	92	97.198	Ovis_aries
ENSLAFG00000006186	DDX50	100	98.100	ENSPPAG00000040723	DDX50	100	98.100	Pan_paniscus
ENSLAFG00000006186	DDX50	51	71.353	ENSPPAG00000026788	-	89	79.560	Pan_paniscus
ENSLAFG00000006186	DDX50	100	97.154	ENSPPRG00000015826	DDX50	100	97.154	Panthera_pardus
ENSLAFG00000006186	DDX50	100	97.154	ENSPTIG00000008454	DDX50	100	97.154	Panthera_tigris_altaica
ENSLAFG00000006186	DDX50	51	71.353	ENSPTRG00000044913	-	89	79.874	Pan_troglodytes
ENSLAFG00000006186	DDX50	100	98.100	ENSPTRG00000002562	DDX50	100	98.100	Pan_troglodytes
ENSLAFG00000006186	DDX50	92	90.708	ENSPANG00000022143	-	92	90.708	Papio_anubis
ENSLAFG00000006186	DDX50	92	94.838	ENSPEMG00000020899	-	92	94.838	Peromyscus_maniculatus_bairdii
ENSLAFG00000006186	DDX50	92	80.147	ENSPCIG00000016036	DDX50	93	81.250	Phascolarctos_cinereus
ENSLAFG00000006186	DDX50	91	98.214	ENSPPYG00000002390	DDX50	100	98.214	Pongo_abelii
ENSLAFG00000006186	DDX50	84	83.117	ENSPCAG00000009692	DDX50	100	83.117	Procavia_capensis
ENSLAFG00000006186	DDX50	79	87.879	ENSPCOG00000012574	DDX50	91	87.879	Propithecus_coquereli
ENSLAFG00000006186	DDX50	86	94.766	ENSPVAG00000009519	DDX50	78	94.766	Pteropus_vampyrus
ENSLAFG00000006186	DDX50	92	94.395	ENSRNOG00000000396	Ddx50	98	97.594	Rattus_norvegicus
ENSLAFG00000006186	DDX50	99	65.616	ENSRBIG00000036573	-	92	68.249	Rhinopithecus_bieti
ENSLAFG00000006186	DDX50	87	96.734	ENSRBIG00000042841	-	98	98.110	Rhinopithecus_bieti
ENSLAFG00000006186	DDX50	99	67.935	ENSRBIG00000039673	-	90	66.814	Rhinopithecus_bieti
ENSLAFG00000006186	DDX50	100	97.829	ENSRROG00000032158	DDX50	100	97.920	Rhinopithecus_roxellana
ENSLAFG00000006186	DDX50	99	65.217	ENSRROG00000022853	-	91	65.288	Rhinopithecus_roxellana
ENSLAFG00000006186	DDX50	52	72.105	ENSRROG00000031940	-	87	75.385	Rhinopithecus_roxellana
ENSLAFG00000006186	DDX50	100	87.246	ENSSBOG00000014441	DDX50	99	88.254	Saimiri_boliviensis_boliviensis
ENSLAFG00000006186	DDX50	85	65.252	ENSSHAG00000005334	-	80	67.162	Sarcophilus_harrisii
ENSLAFG00000006186	DDX50	89	81.155	ENSSHAG00000005690	DDX50	91	81.212	Sarcophilus_harrisii
ENSLAFG00000006186	DDX50	88	87.287	ENSSARG00000013553	DDX50	88	87.287	Sorex_araneus
ENSLAFG00000006186	DDX50	100	94.708	ENSSSCG00000010246	DDX50	92	95.870	Sus_scrofa
ENSLAFG00000006186	DDX50	92	74.484	ENSTBEG00000001085	DDX50	92	74.926	Tupaia_belangeri
ENSLAFG00000006186	DDX50	100	89.959	ENSTTRG00000012408	DDX50	99	89.959	Tursiops_truncatus
ENSLAFG00000006186	DDX50	100	96.748	ENSUAMG00000010976	DDX50	99	98.294	Ursus_americanus
ENSLAFG00000006186	DDX50	100	96.748	ENSUMAG00000007726	DDX50	99	96.748	Ursus_maritimus
ENSLAFG00000006186	DDX50	100	96.336	ENSVPAG00000000626	DDX50	100	96.336	Vicugna_pacos
ENSLAFG00000006186	DDX50	82	91.874	ENSVVUG00000020366	DDX50	98	98.128	Vulpes_vulpes