EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000006348 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 64778 bases
Position: chrscaffold_26:16696407-16761184
Accession: 16816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005334	ResIII	PF04851.15	7.2e-08	1	1
ENSLAFP00000025978	ResIII	PF04851.15	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000026838	CHD5-202	5274	-	ENSLAFP00000025978	1758 (aa)	-	G3UDS0
ENSLAFT00000006350	CHD5-201	5784	-	ENSLAFP00000005334	1928 (aa)	-	G3SY08

Gene Model

Click here to download ENSLAFG00000006348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000006348	CHD5	95	68.747	ENSLAFG00000022842	-	95	69.169
ENSLAFG00000006348	CHD5	92	74.984	ENSLAFG00000000572	CHD3	86	84.834

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006348	CHD5	99	96.781	ENSG00000116254	CHD5	99	96.781	Homo_sapiens
ENSLAFG00000006348	CHD5	100	96.060	ENSAMEG00000009880	CHD5	100	96.060	Ailuropoda_melanoleuca
ENSLAFG00000006348	CHD5	100	77.268	ENSACIG00000012582	chd5	99	77.518	Amphilophus_citrinellus
ENSLAFG00000006348	CHD5	100	77.320	ENSAOCG00000020356	chd5	93	78.288	Amphiprion_ocellaris
ENSLAFG00000006348	CHD5	98	81.395	ENSAPLG00000015475	CHD5	98	81.650	Anas_platyrhynchos
ENSLAFG00000006348	CHD5	99	82.769	ENSACAG00000002441	CHD5	99	82.308	Anolis_carolinensis
ENSLAFG00000006348	CHD5	88	96.925	ENSANAG00000001078	CHD5	91	96.925	Aotus_nancymaae
ENSLAFG00000006348	CHD5	100	74.972	ENSACLG00000003012	chd5	96	74.972	Astatotilapia_calliptera
ENSLAFG00000006348	CHD5	98	76.107	ENSAMXG00000008921	chd5	95	85.992	Astyanax_mexicanus
ENSLAFG00000006348	CHD5	94	97.192	ENSBTAG00000040477	CHD5	99	97.192	Bos_taurus
ENSLAFG00000006348	CHD5	99	96.729	ENSCJAG00000000101	CHD5	99	96.729	Callithrix_jacchus
ENSLAFG00000006348	CHD5	94	97.080	ENSCAFG00000019545	CHD5	99	97.080	Canis_familiaris
ENSLAFG00000006348	CHD5	100	96.836	ENSCAFG00020008689	CHD5	96	96.836	Canis_lupus_dingo
ENSLAFG00000006348	CHD5	99	94.987	ENSCHIG00000015027	CHD5	97	94.538	Capra_hircus
ENSLAFG00000006348	CHD5	99	91.087	ENSTSYG00000033991	CHD5	99	91.367	Carlito_syrichta
ENSLAFG00000006348	CHD5	99	95.481	ENSCAPG00000009294	CHD5	99	95.481	Cavia_aperea
ENSLAFG00000006348	CHD5	99	95.429	ENSCPOG00000025080	CHD5	99	95.429	Cavia_porcellus
ENSLAFG00000006348	CHD5	99	96.781	ENSCCAG00000024756	CHD5	99	96.781	Cebus_capucinus
ENSLAFG00000006348	CHD5	99	96.158	ENSCATG00000043011	CHD5	99	96.158	Cercocebus_atys
ENSLAFG00000006348	CHD5	99	95.691	ENSCLAG00000010589	CHD5	99	95.691	Chinchilla_lanigera
ENSLAFG00000006348	CHD5	99	97.040	ENSCSAG00000000733	CHD5	99	97.040	Chlorocebus_sabaeus
ENSLAFG00000006348	CHD5	94	91.433	ENSCPBG00000019363	CHD5	99	91.378	Chrysemys_picta_bellii
ENSLAFG00000006348	CHD5	99	97.040	ENSCANG00000032302	CHD5	99	97.040	Colobus_angolensis_palliatus
ENSLAFG00000006348	CHD5	55	96.698	ENSCGRG00001011042	Chd5	100	96.698	Cricetulus_griseus_chok1gshd
ENSLAFG00000006348	CHD5	100	95.228	ENSCGRG00000011341	Chd5	99	94.600	Cricetulus_griseus_crigri
ENSLAFG00000006348	CHD5	98	67.518	ENSDARG00000025789	chd4b	96	66.478	Danio_rerio
ENSLAFG00000006348	CHD5	100	77.231	ENSDARG00000105083	chd5	97	79.701	Danio_rerio
ENSLAFG00000006348	CHD5	99	91.900	ENSDNOG00000046342	CHD5	99	91.848	Dasypus_novemcinctus
ENSLAFG00000006348	CHD5	99	95.641	ENSDORG00000005923	Chd5	99	95.641	Dipodomys_ordii
ENSLAFG00000006348	CHD5	100	95.747	ENSEASG00005021464	CHD5	99	99.170	Equus_asinus_asinus
ENSLAFG00000006348	CHD5	99	95.322	ENSECAG00000025043	CHD5	99	98.765	Equus_caballus
ENSLAFG00000006348	CHD5	77	99.531	ENSEEUG00000002772	CHD5	77	99.531	Erinaceus_europaeus
ENSLAFG00000006348	CHD5	100	75.830	ENSELUG00000010742	chd5	90	91.628	Esox_lucius
ENSLAFG00000006348	CHD5	99	96.519	ENSFCAG00000006319	CHD5	99	96.519	Felis_catus
ENSLAFG00000006348	CHD5	100	88.854	ENSFALG00000009740	CHD5	99	88.493	Ficedula_albicollis
ENSLAFG00000006348	CHD5	100	95.747	ENSFDAG00000012881	CHD5	97	94.087	Fukomys_damarensis
ENSLAFG00000006348	CHD5	99	88.509	ENSGALG00000000747	CHD5	99	88.354	Gallus_gallus
ENSLAFG00000006348	CHD5	61	78.947	ENSGACG00000004389	chd5	93	82.983	Gasterosteus_aculeatus
ENSLAFG00000006348	CHD5	91	95.610	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSLAFG00000006348	CHD5	99	96.779	ENSGGOG00000000708	CHD5	99	96.779	Gorilla_gorilla
ENSLAFG00000006348	CHD5	100	75.791	ENSHBUG00000013453	chd5	96	76.144	Haplochromis_burtoni
ENSLAFG00000006348	CHD5	99	95.630	ENSHGLG00000018184	CHD5	99	95.800	Heterocephalus_glaber_female
ENSLAFG00000006348	CHD5	100	89.124	ENSHGLG00100013261	CHD5	97	89.297	Heterocephalus_glaber_male
ENSLAFG00000006348	CHD5	100	77.396	ENSIPUG00000005446	chd5	98	77.981	Ictalurus_punctatus
ENSLAFG00000006348	CHD5	99	96.625	ENSSTOG00000002778	CHD5	98	96.555	Ictidomys_tridecemlineatus
ENSLAFG00000006348	CHD5	99	95.166	ENSJJAG00000019072	Chd5	99	94.496	Jaculus_jaculus
ENSLAFG00000006348	CHD5	100	80.911	ENSLOCG00000004944	chd5	94	81.339	Lepisosteus_oculatus
ENSLAFG00000006348	CHD5	99	97.040	ENSMFAG00000033993	CHD5	99	97.245	Macaca_fascicularis
ENSLAFG00000006348	CHD5	99	97.040	ENSMMUG00000016838	CHD5	99	97.040	Macaca_mulatta
ENSLAFG00000006348	CHD5	99	97.092	ENSMNEG00000040044	CHD5	99	97.092	Macaca_nemestrina
ENSLAFG00000006348	CHD5	99	93.542	ENSMLEG00000039166	CHD5	99	93.542	Mandrillus_leucophaeus
ENSLAFG00000006348	CHD5	94	80.583	ENSMZEG00005000841	chd5	91	79.905	Maylandia_zebra
ENSLAFG00000006348	CHD5	100	88.223	ENSMGAG00000001055	CHD5	99	88.430	Meleagris_gallopavo
ENSLAFG00000006348	CHD5	97	97.854	ENSMICG00000017862	CHD5	99	97.860	Microcebus_murinus
ENSLAFG00000006348	CHD5	99	95.275	ENSMOCG00000011049	Chd5	99	95.275	Microtus_ochrogaster
ENSLAFG00000006348	CHD5	92	80.802	ENSMODG00000006294	CHD5	78	94.226	Monodelphis_domestica
ENSLAFG00000006348	CHD5	100	77.597	ENSMALG00000002831	chd5	97	77.419	Monopterus_albus
ENSLAFG00000006348	CHD5	99	95.112	MGP_CAROLIEiJ_G0026857	Chd5	99	95.119	Mus_caroli
ENSLAFG00000006348	CHD5	99	94.704	ENSMUSG00000005045	Chd5	99	94.660	Mus_musculus
ENSLAFG00000006348	CHD5	99	94.852	MGP_PahariEiJ_G0029205	Chd5	99	94.860	Mus_pahari
ENSLAFG00000006348	CHD5	99	95.008	MGP_SPRETEiJ_G0027850	Chd5	99	95.016	Mus_spretus
ENSLAFG00000006348	CHD5	99	92.800	ENSMPUG00000007122	CHD5	96	95.968	Mustela_putorius_furo
ENSLAFG00000006348	CHD5	100	94.554	ENSNGAG00000019812	Chd5	96	94.554	Nannospalax_galili
ENSLAFG00000006348	CHD5	99	94.548	ENSNLEG00000010320	CHD5	99	94.338	Nomascus_leucogenys
ENSLAFG00000006348	CHD5	87	90.494	ENSOPRG00000004304	CHD5	87	90.421	Ochotona_princeps
ENSLAFG00000006348	CHD5	99	95.636	ENSODEG00000010262	CHD5	99	95.636	Octodon_degus
ENSLAFG00000006348	CHD5	100	77.918	ENSONIG00000000619	chd5	93	77.881	Oreochromis_niloticus
ENSLAFG00000006348	CHD5	89	88.462	ENSOANG00000001819	CHD5	98	72.519	Ornithorhynchus_anatinus
ENSLAFG00000006348	CHD5	100	94.816	ENSOGAG00000005703	CHD5	99	94.816	Otolemur_garnettii
ENSLAFG00000006348	CHD5	98	95.979	ENSOARG00000013425	CHD5	98	95.979	Ovis_aries
ENSLAFG00000006348	CHD5	99	96.781	ENSPPAG00000034048	CHD5	99	96.781	Pan_paniscus
ENSLAFG00000006348	CHD5	99	95.948	ENSPPRG00000009453	CHD5	99	95.948	Panthera_pardus
ENSLAFG00000006348	CHD5	99	88.946	ENSPTIG00000013926	CHD5	99	88.997	Panthera_tigris_altaica
ENSLAFG00000006348	CHD5	99	96.783	ENSPTRG00000000075	CHD5	99	96.783	Pan_troglodytes
ENSLAFG00000006348	CHD5	99	97.040	ENSPANG00000006765	CHD5	99	97.040	Papio_anubis
ENSLAFG00000006348	CHD5	98	77.815	ENSPKIG00000004282	chd5	98	77.305	Paramormyrops_kingsleyae
ENSLAFG00000006348	CHD5	97	83.227	ENSPSIG00000006414	CHD5	100	83.581	Pelodiscus_sinensis
ENSLAFG00000006348	CHD5	69	96.171	ENSPEMG00000014799	Chd5	100	95.195	Peromyscus_maniculatus_bairdii
ENSLAFG00000006348	CHD5	99	92.654	ENSPCIG00000028310	CHD5	97	92.292	Phascolarctos_cinereus
ENSLAFG00000006348	CHD5	95	87.838	ENSPLAG00000005343	chd5	99	75.065	Poecilia_latipinna
ENSLAFG00000006348	CHD5	99	92.779	ENSPPYG00000001952	CHD5	99	92.260	Pongo_abelii
ENSLAFG00000006348	CHD5	99	97.144	ENSPCOG00000022930	CHD5	99	97.144	Propithecus_coquereli
ENSLAFG00000006348	CHD5	100	76.487	ENSPNYG00000003183	chd5	98	76.719	Pundamilia_nyererei
ENSLAFG00000006348	CHD5	99	95.164	ENSRNOG00000011268	Chd5	99	94.496	Rattus_norvegicus
ENSLAFG00000006348	CHD5	99	93.634	ENSRBIG00000032140	CHD5	96	96.973	Rhinopithecus_bieti
ENSLAFG00000006348	CHD5	99	96.779	ENSRROG00000041146	CHD5	99	96.779	Rhinopithecus_roxellana
ENSLAFG00000006348	CHD5	99	92.539	ENSSBOG00000001955	CHD5	99	96.970	Saimiri_boliviensis_boliviensis
ENSLAFG00000006348	CHD5	98	87.025	ENSSHAG00000018641	CHD5	99	87.110	Sarcophilus_harrisii
ENSLAFG00000006348	CHD5	100	77.676	ENSSFOG00015006296	chd5	92	86.822	Scleropages_formosus
ENSLAFG00000006348	CHD5	100	76.805	ENSSDUG00000017526	chd5	92	90.826	Seriola_dumerili
ENSLAFG00000006348	CHD5	100	80.982	ENSSPUG00000010622	CHD5	98	81.684	Sphenodon_punctatus
ENSLAFG00000006348	CHD5	98	97.034	ENSSSCG00000003366	CHD5	99	97.190	Sus_scrofa
ENSLAFG00000006348	CHD5	97	81.808	ENSTGUG00000002634	-	100	83.609	Taeniopygia_guttata
ENSLAFG00000006348	CHD5	57	78.613	ENSTNIG00000004346	chd5	99	81.158	Tetraodon_nigroviridis
ENSLAFG00000006348	CHD5	99	94.575	ENSTTRG00000010468	CHD5	99	94.600	Tursiops_truncatus
ENSLAFG00000006348	CHD5	99	96.862	ENSUAMG00000024509	CHD5	98	96.862	Ursus_americanus
ENSLAFG00000006348	CHD5	99	91.881	ENSUMAG00000024173	CHD5	98	93.019	Ursus_maritimus
ENSLAFG00000006348	CHD5	100	95.801	ENSVVUG00000026480	CHD5	96	98.374	Vulpes_vulpes
ENSLAFG00000006348	CHD5	100	82.297	ENSXETG00000002904	chd5	97	82.041	Xenopus_tropicalis
ENSLAFG00000006348	CHD5	62	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus