EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000006436 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 2620 bases
Position: chrscaffold_88:353070-355689
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000021616	Ribosomal_L7Ae	PF01248.26	8.2e-24	1	1
ENSLAFP00000005402	Ribosomal_L7Ae	PF01248.26	1.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000036200	-	612	-	ENSLAFP00000021616	204 (aa)	-	G3U1A8
ENSLAFT00000006436	-	810	-	ENSLAFP00000005402	269 (aa)	-	G3SY62

Gene Model

Click here to download ENSLAFG00000006436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006436's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000006436	-	98	77.947	ENSLAFG00000028418	-	93	77.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006436	-	99	96.241	ENSAPLG00000005247	RPL7A	99	96.241	Anas_platyrhynchos
ENSLAFG00000006436	-	99	82.642	ENSANAG00000035965	-	94	82.072	Aotus_nancymaae
ENSLAFG00000006436	-	62	92.913	ENSANAG00000021362	-	97	93.878	Aotus_nancymaae
ENSLAFG00000006436	-	95	90.722	ENSAMXG00000012525	rpl7a	94	89.641	Astyanax_mexicanus
ENSLAFG00000006436	-	100	89.216	ENSBTAG00000047286	-	90	89.216	Bos_taurus
ENSLAFG00000006436	-	95	90.674	ENSCJAG00000048127	-	94	89.641	Callithrix_jacchus
ENSLAFG00000006436	-	62	93.701	ENSCJAG00000044259	-	97	94.558	Callithrix_jacchus
ENSLAFG00000006436	-	62	94.444	ENSCJAG00000040821	-	99	94.521	Callithrix_jacchus
ENSLAFG00000006436	-	53	97.222	ENSCJAG00000014827	-	61	97.656	Callithrix_jacchus
ENSLAFG00000006436	-	53	96.330	ENSCJAG00000039516	-	85	96.875	Callithrix_jacchus
ENSLAFG00000006436	-	97	86.641	ENSCHIG00000023018	-	92	86.853	Capra_hircus
ENSLAFG00000006436	-	61	80.645	ENSTSYG00000029336	-	100	80.137	Carlito_syrichta
ENSLAFG00000006436	-	99	88.679	ENSCCAG00000033718	-	94	88.446	Cebus_capucinus
ENSLAFG00000006436	-	57	64.463	ENSCCAG00000035068	-	87	62.595	Cebus_capucinus
ENSLAFG00000006436	-	61	93.600	ENSCATG00000031343	-	96	94.483	Cercocebus_atys
ENSLAFG00000006436	-	62	95.276	ENSCATG00000032659	-	100	95.918	Cercocebus_atys
ENSLAFG00000006436	-	95	84.536	ENSCSAG00000005053	-	94	86.853	Chlorocebus_sabaeus
ENSLAFG00000006436	-	93	90.800	ENSCSAG00000018506	-	94	90.800	Chlorocebus_sabaeus
ENSLAFG00000006436	-	95	80.829	ENSCSAG00000018485	-	94	82.869	Chlorocebus_sabaeus
ENSLAFG00000006436	-	95	96.373	ENSCSAG00000019115	-	94	96.414	Chlorocebus_sabaeus
ENSLAFG00000006436	-	99	97.358	ENSCPBG00000021161	-	99	97.358	Chrysemys_picta_bellii
ENSLAFG00000006436	-	95	97.423	ENSCGRG00001020617	-	99	92.453	Cricetulus_griseus_chok1gshd
ENSLAFG00000006436	-	95	86.667	ENSCGRG00000003429	-	94	86.853	Cricetulus_griseus_crigri
ENSLAFG00000006436	-	95	92.268	ENSDARG00000019230	rpl7a	94	92.032	Danio_rerio
ENSLAFG00000006436	-	98	62.500	ENSDNOG00000030713	-	93	62.151	Dasypus_novemcinctus
ENSLAFG00000006436	-	94	83.246	ENSDORG00000027559	-	89	83.886	Dipodomys_ordii
ENSLAFG00000006436	-	97	68.199	ENSEBUG00000015826	rpl7a	94	68.127	Eptatretus_burgeri
ENSLAFG00000006436	-	95	91.753	ENSELUG00000023023	rpl7a	94	91.235	Esox_lucius
ENSLAFG00000006436	-	71	72.222	ENSFCAG00000026737	-	95	72.561	Felis_catus
ENSLAFG00000006436	-	96	71.939	ENSFCAG00000029566	-	95	71.939	Felis_catus
ENSLAFG00000006436	-	99	96.226	ENSFALG00000001502	-	87	96.226	Ficedula_albicollis
ENSLAFG00000006436	-	99	95.880	ENSGAGG00000010277	-	96	95.880	Gopherus_agassizii
ENSLAFG00000006436	-	98	89.394	ENSGGOG00000026585	-	99	89.394	Gorilla_gorilla
ENSLAFG00000006436	-	62	95.276	ENSGGOG00000023680	-	100	92.763	Gorilla_gorilla
ENSLAFG00000006436	-	61	94.444	ENSGGOG00000025516	-	95	95.205	Gorilla_gorilla
ENSLAFG00000006436	-	95	77.835	ENSHGLG00000012167	-	100	76.856	Heterocephalus_glaber_female
ENSLAFG00000006436	-	95	76.804	ENSHGLG00000018482	-	93	78.400	Heterocephalus_glaber_female
ENSLAFG00000006436	-	99	98.491	ENSHGLG00000013590	RPL7A	99	98.491	Heterocephalus_glaber_female
ENSLAFG00000006436	-	95	77.835	ENSHGLG00100007133	-	100	76.856	Heterocephalus_glaber_male
ENSLAFG00000006436	-	99	98.491	ENSHGLG00100007783	RPL7A	99	98.491	Heterocephalus_glaber_male
ENSLAFG00000006436	-	95	76.804	ENSHGLG00100004197	-	93	78.400	Heterocephalus_glaber_male
ENSLAFG00000006436	-	95	88.660	ENSIPUG00000008146	rpl7a	94	89.243	Ictalurus_punctatus
ENSLAFG00000006436	-	95	78.351	ENSSTOG00000031997	-	94	77.291	Ictidomys_tridecemlineatus
ENSLAFG00000006436	-	68	77.698	ENSJJAG00000016802	-	99	83.333	Jaculus_jaculus
ENSLAFG00000006436	-	93	82.869	ENSJJAG00000014376	-	94	82.869	Jaculus_jaculus
ENSLAFG00000006436	-	99	83.774	ENSJJAG00000024026	-	94	83.267	Jaculus_jaculus
ENSLAFG00000006436	-	98	74.254	ENSJJAG00000022569	-	94	74.118	Jaculus_jaculus
ENSLAFG00000006436	-	93	73.896	ENSJJAG00000012899	-	98	73.770	Jaculus_jaculus
ENSLAFG00000006436	-	94	91.270	ENSLACG00000018224	rpl7a	91	91.235	Latimeria_chalumnae
ENSLAFG00000006436	-	99	98.113	ENSMFAG00000027988	-	99	98.113	Macaca_fascicularis
ENSLAFG00000006436	-	99	93.962	ENSMFAG00000044607	-	99	93.962	Macaca_fascicularis
ENSLAFG00000006436	-	65	92.424	ENSMMUG00000012379	-	100	93.421	Macaca_mulatta
ENSLAFG00000006436	-	99	94.340	ENSMMUG00000049182	-	100	93.421	Macaca_mulatta
ENSLAFG00000006436	-	65	90.977	ENSMNEG00000037496	-	99	97.222	Macaca_nemestrina
ENSLAFG00000006436	-	99	94.717	ENSMNEG00000025946	-	99	94.717	Macaca_nemestrina
ENSLAFG00000006436	-	99	96.981	ENSMNEG00000005027	-	99	96.981	Macaca_nemestrina
ENSLAFG00000006436	-	93	89.960	ENSMLEG00000012582	-	94	90.040	Mandrillus_leucophaeus
ENSLAFG00000006436	-	62	83.465	ENSMAUG00000019197	-	96	82.069	Mesocricetus_auratus
ENSLAFG00000006436	-	62	94.444	ENSMICG00000026491	-	95	95.205	Microcebus_murinus
ENSLAFG00000006436	-	99	96.604	ENSMOCG00000008541	-	99	96.604	Microtus_ochrogaster
ENSLAFG00000006436	-	95	64.062	ENSMPUG00000009401	-	92	64.400	Mustela_putorius_furo
ENSLAFG00000006436	-	58	93.220	ENSMPUG00000012398	-	98	94.203	Mustela_putorius_furo
ENSLAFG00000006436	-	98	75.758	ENSMPUG00000017429	-	93	76.096	Mustela_putorius_furo
ENSLAFG00000006436	-	99	72.556	ENSMPUG00000003699	-	93	72.908	Mustela_putorius_furo
ENSLAFG00000006436	-	96	65.128	ENSMPUG00000012594	-	94	66.667	Mustela_putorius_furo
ENSLAFG00000006436	-	95	83.420	ENSNLEG00000030063	-	94	84.861	Nomascus_leucogenys
ENSLAFG00000006436	-	95	95.686	ENSNLEG00000030504	-	94	96.016	Nomascus_leucogenys
ENSLAFG00000006436	-	62	94.488	ENSNLEG00000030901	-	100	91.447	Nomascus_leucogenys
ENSLAFG00000006436	-	99	96.981	ENSMEUG00000014550	-	99	96.981	Notamacropus_eugenii
ENSLAFG00000006436	-	95	93.299	ENSOANG00000007060	-	89	93.562	Ornithorhynchus_anatinus
ENSLAFG00000006436	-	95	72.539	ENSOCUG00000025450	-	99	71.121	Oryctolagus_cuniculus
ENSLAFG00000006436	-	95	73.711	ENSOCUG00000027027	-	100	73.303	Oryctolagus_cuniculus
ENSLAFG00000006436	-	95	91.753	ENSOCUG00000022874	-	94	93.227	Oryctolagus_cuniculus
ENSLAFG00000006436	-	97	55.939	ENSOGAG00000029360	-	95	58.000	Otolemur_garnettii
ENSLAFG00000006436	-	95	93.264	ENSOGAG00000007682	-	94	93.227	Otolemur_garnettii
ENSLAFG00000006436	-	97	91.985	ENSOARG00000004560	-	93	92.430	Ovis_aries
ENSLAFG00000006436	-	93	90.945	ENSOARG00000003677	-	94	90.945	Ovis_aries
ENSLAFG00000006436	-	62	90.551	ENSPPAG00000035063	-	97	91.837	Pan_paniscus
ENSLAFG00000006436	-	97	85.496	ENSPPAG00000029689	-	96	86.454	Pan_paniscus
ENSLAFG00000006436	-	99	87.266	ENSPPAG00000030172	-	95	94.521	Pan_paniscus
ENSLAFG00000006436	-	98	89.773	ENSPPAG00000037938	-	99	89.773	Pan_paniscus
ENSLAFG00000006436	-	62	70.635	ENSPPRG00000008233	-	95	73.973	Panthera_pardus
ENSLAFG00000006436	-	99	97.736	ENSPTRG00000029310	-	99	97.736	Pan_troglodytes
ENSLAFG00000006436	-	62	90.551	ENSPTRG00000049410	-	100	88.816	Pan_troglodytes
ENSLAFG00000006436	-	87	92.090	ENSPTRG00000044655	-	99	92.222	Pan_troglodytes
ENSLAFG00000006436	-	98	90.152	ENSPTRG00000051913	-	99	90.152	Pan_troglodytes
ENSLAFG00000006436	-	97	85.496	ENSPTRG00000047886	-	96	86.454	Pan_troglodytes
ENSLAFG00000006436	-	61	96.800	ENSPANG00000003750	-	96	97.241	Papio_anubis
ENSLAFG00000006436	-	62	95.276	ENSPANG00000034498	-	100	95.238	Papio_anubis
ENSLAFG00000006436	-	62	95.238	ENSPEMG00000013592	-	99	95.205	Peromyscus_maniculatus_bairdii
ENSLAFG00000006436	-	99	82.707	ENSPCIG00000026434	-	94	82.869	Phascolarctos_cinereus
ENSLAFG00000006436	-	93	86.056	ENSPCOG00000004337	-	94	86.056	Propithecus_coquereli
ENSLAFG00000006436	-	95	89.691	ENSPNAG00000029194	rpl7a	99	89.041	Pygocentrus_nattereri
ENSLAFG00000006436	-	95	95.855	ENSRNOG00000033652	AABR07045321.1	94	95.618	Rattus_norvegicus
ENSLAFG00000006436	-	97	81.298	ENSRNOG00000014425	AABR07054456.1	95	81.275	Rattus_norvegicus
ENSLAFG00000006436	-	95	92.784	ENSRNOG00000031902	AABR07027819.1	94	93.200	Rattus_norvegicus
ENSLAFG00000006436	-	95	94.902	ENSRNOG00000029130	AABR07057586.1	94	95.219	Rattus_norvegicus
ENSLAFG00000006436	-	97	96.154	ENSRNOG00000029423	AABR07052519.1	97	96.154	Rattus_norvegicus
ENSLAFG00000006436	-	95	94.118	ENSRNOG00000031532	AABR07018167.1	94	94.024	Rattus_norvegicus
ENSLAFG00000006436	-	95	92.268	ENSRNOG00000029310	AABR07049918.1	94	92.032	Rattus_norvegicus
ENSLAFG00000006436	-	99	84.151	ENSRNOG00000022718	AC094246.2	94	84.462	Rattus_norvegicus
ENSLAFG00000006436	-	95	94.330	ENSRNOG00000028826	AC128901.1	94	95.618	Rattus_norvegicus
ENSLAFG00000006436	-	95	93.299	ENSRBIG00000010998	-	94	93.625	Rhinopithecus_bieti
ENSLAFG00000006436	-	61	98.387	ENSRBIG00000007002	-	92	97.222	Rhinopithecus_bieti
ENSLAFG00000006436	-	89	86.813	ENSRBIG00000037343	-	91	87.727	Rhinopithecus_bieti
ENSLAFG00000006436	-	89	86.813	ENSRROG00000041577	-	91	87.727	Rhinopithecus_roxellana
ENSLAFG00000006436	-	62	96.825	ENSRROG00000035341	-	95	97.260	Rhinopithecus_roxellana
ENSLAFG00000006436	-	95	81.347	ENSSBOG00000033255	-	94	80.478	Saimiri_boliviensis_boliviensis
ENSLAFG00000006436	-	90	50.000	ENSSSCG00000034232	-	93	71.171	Sus_scrofa
ENSLAFG00000006436	-	95	94.845	ENSTGUG00000005463	-	93	96.016	Taeniopygia_guttata
ENSLAFG00000006436	-	95	91.237	ENSTNIG00000007501	rpl7a	93	91.235	Tetraodon_nigroviridis
ENSLAFG00000006436	-	62	75.591	ENSTBEG00000003344	-	97	76.712	Tupaia_belangeri