EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLAFG00000006532 (Gene tree)
Gene ID
-
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Minus strand
Length
287841 bases
Position
chrscaffold_14:31836468-32124308
Accession
100669279
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58110
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58210
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58310
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58410
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58510
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58610
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58710
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58810
ENSLAFP00000005482zf-C2H2PF00096.263.7e-58910
ENSLAFP00000005482zf-C2H2PF00096.263.7e-581010
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50110
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50210
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50310
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50410
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50510
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50610
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50710
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50810
ENSLAFP00000028332zf-C2H2PF00096.261.3e-50910
ENSLAFP00000028332zf-C2H2PF00096.261.3e-501010
ENSLAFP00000005482zf-metPF12874.71.6e-2113
ENSLAFP00000005482zf-metPF12874.71.6e-2123
ENSLAFP00000005482zf-metPF12874.71.6e-2133
ENSLAFP00000028332zf-metPF12874.71.3e-1712
ENSLAFP00000028332zf-metPF12874.71.3e-1722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000029959PRDM5-201954-ENSLAFP00000028332317 (aa)-G3UKH3
ENSLAFT00000006534PRDM5-2021797-ENSLAFP00000005482599 (aa)XP_010588830G3SYC7
Gene Model
Click here to download ENSLAFG00000006532's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006532's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLAFG00000006532PRDM59735.714ENSLAFG00000022290ZNF6689533.166
ENSLAFG00000006532PRDM59940.000ENSLAFG00000011186ZNF2357940.000
ENSLAFG00000006532PRDM59837.500ENSLAFG00000008686-10037.168
ENSLAFG00000006532PRDM59938.596ENSLAFG00000010205ZFAT9931.500
ENSLAFG00000006532PRDM59938.095ENSLAFG00000002458GZF15336.816
ENSLAFG00000006532PRDM59837.662ENSLAFG00000002909-8537.662
ENSLAFG00000006532PRDM59540.104ENSLAFG00000022529ZNF62810036.441
ENSLAFG00000006532PRDM57644.615ENSLAFG00000004309SALL45444.615
ENSLAFG00000006532PRDM59442.105ENSLAFG00000006979PRDM126842.353
ENSLAFG00000006532PRDM59933.688ENSLAFG00000002266ZNF3198931.043
ENSLAFG00000006532PRDM59737.963ENSLAFG00000027315GTF3A7235.252
ENSLAFG00000006532PRDM59745.455ENSLAFG00000006959ZNF26745.455
ENSLAFG00000006532PRDM59736.257ENSLAFG00000002317PATZ15436.257
ENSLAFG00000006532PRDM59838.095ENSLAFG00000030700ZNF86510048.052
ENSLAFG00000006532PRDM59736.515ENSLAFG00000002806ZNF3177338.667
ENSLAFG00000006532PRDM59834.767ENSLAFG00000027848ZNF4085135.656
ENSLAFG00000006532PRDM59743.939ENSLAFG00000031653-10043.939
ENSLAFG00000006532PRDM59836.806ENSLAFG00000032306-6536.806
ENSLAFG00000006532PRDM59639.015ENSLAFG00000011022ZFP69B6540.909
ENSLAFG00000006532PRDM59737.037ENSLAFG00000010084ZNF6526233.668
ENSLAFG00000006532PRDM59738.889ENSLAFG00000022367GFI1B5439.130
ENSLAFG00000006532PRDM59830.769ENSLAFG00000000308ZNF5748631.092
ENSLAFG00000006532PRDM59743.137ENSLAFG00000030265SNAI18943.137
ENSLAFG00000006532PRDM59530.742ENSLAFG00000032716-10032.127
ENSLAFG00000006532PRDM59538.272ENSLAFG00000008381ZNF3847334.328
ENSLAFG00000006532PRDM59539.815ENSLAFG00000007048ZIC35239.815
ENSLAFG00000006532PRDM59840.187ENSLAFG00000005117SNAI36337.778
ENSLAFG00000006532PRDM59838.264ENSLAFG00000007752-9838.264
ENSLAFG00000006532PRDM59836.522ENSLAFG00000022960ZFP647436.522
ENSLAFG00000006532PRDM59939.623ENSLAFG00000013445ZNF5219739.623
ENSLAFG00000006532PRDM59937.874ENSLAFG00000014451-8836.385
ENSLAFG00000006532PRDM59741.553ENSLAFG00000003125ZFP17941.553
ENSLAFG00000006532PRDM58740.876ENSLAFG00000009299SNAI26041.606
ENSLAFG00000006532PRDM59830.769ENSLAFG00000018386ZNF4239636.792
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000006532PRDM510097.496ENSG00000138738PRDM510097.496Homo_sapiens
ENSLAFG00000006532PRDM59982.911ENSAPOG00000023220prdm510080.366Acanthochromis_polyacanthus
ENSLAFG00000006532PRDM59985.220ENSAMEG00000003050PRDM510088.636Ailuropoda_melanoleuca
ENSLAFG00000006532PRDM59982.911ENSACIG00000000406prdm510079.333Amphilophus_citrinellus
ENSLAFG00000006532PRDM59982.595ENSAOCG00000014806prdm510081.333Amphiprion_ocellaris
ENSLAFG00000006532PRDM510071.820ENSAPEG00000016846prdm510073.108Amphiprion_percula
ENSLAFG00000006532PRDM59982.911ENSATEG00000013829prdm510081.167Anabas_testudineus
ENSLAFG00000006532PRDM59984.494ENSAPLG00000013828PRDM510081.395Anas_platyrhynchos
ENSLAFG00000006532PRDM59984.494ENSACAG00000012999PRDM510076.349Anolis_carolinensis
ENSLAFG00000006532PRDM510098.418ENSANAG00000027411PRDM510098.000Aotus_nancymaae
ENSLAFG00000006532PRDM59982.911ENSACLG00000017996prdm510081.333Astatotilapia_calliptera
ENSLAFG00000006532PRDM59982.911ENSAMXG00000041864prdm59975.233Astyanax_mexicanus
ENSLAFG00000006532PRDM510092.222ENSBTAG00000012111PRDM510092.222Bos_taurus
ENSLAFG00000006532PRDM510098.418ENSCJAG00000003133PRDM510097.333Callithrix_jacchus
ENSLAFG00000006532PRDM59988.945ENSCAFG00000004179PRDM59686.543Canis_familiaris
ENSLAFG00000006532PRDM510097.663ENSCAFG00020017685PRDM510097.663Canis_lupus_dingo
ENSLAFG00000006532PRDM510096.661ENSCHIG00000018772PRDM510096.661Capra_hircus
ENSLAFG00000006532PRDM59595.720ENSTSYG00000009630PRDM59495.720Carlito_syrichta
ENSLAFG00000006532PRDM59797.333ENSCAPG00000015217PRDM510097.333Cavia_aperea
ENSLAFG00000006532PRDM59797.333ENSCPOG00000012883PRDM510097.333Cavia_porcellus
ENSLAFG00000006532PRDM510098.734ENSCCAG00000023157PRDM510098.000Cebus_capucinus
ENSLAFG00000006532PRDM510099.051ENSCATG00000042510PRDM510098.000Cercocebus_atys
ENSLAFG00000006532PRDM59797.333ENSCLAG00000005392PRDM510097.333Chinchilla_lanigera
ENSLAFG00000006532PRDM510097.329ENSCSAG00000003729PRDM510097.329Chlorocebus_sabaeus
ENSLAFG00000006532PRDM59994.064ENSCHOG00000007801PRDM59188.112Choloepus_hoffmanni
ENSLAFG00000006532PRDM510084.810ENSCPBG00000024735PRDM510080.751Chrysemys_picta_bellii
ENSLAFG00000006532PRDM510099.051ENSCANG00000036807PRDM510098.000Colobus_angolensis_palliatus
ENSLAFG00000006532PRDM510096.835ENSCGRG00001010581Prdm510094.667Cricetulus_griseus_chok1gshd
ENSLAFG00000006532PRDM59988.930ENSCGRG00000010996-9984.588Cricetulus_griseus_crigri
ENSLAFG00000006532PRDM59982.595ENSCSEG00000019979prdm510081.333Cynoglossus_semilaevis
ENSLAFG00000006532PRDM59974.367ENSCVAG00000013692prdm510073.217Cyprinodon_variegatus
ENSLAFG00000006532PRDM59981.962ENSDARG00000006288prdm510075.158Danio_rerio
ENSLAFG00000006532PRDM59991.483ENSDNOG00000002009PRDM510091.652Dasypus_novemcinctus
ENSLAFG00000006532PRDM510097.468ENSDORG00000007739Prdm57697.468Dipodomys_ordii
ENSLAFG00000006532PRDM58589.764ENSETEG00000020268PRDM59089.764Echinops_telfairi
ENSLAFG00000006532PRDM59979.683ENSEBUG00000004301prdm510071.739Eptatretus_burgeri
ENSLAFG00000006532PRDM510099.367ENSEASG00005018365PRDM510098.667Equus_asinus_asinus
ENSLAFG00000006532PRDM510072.222ENSECAG00000024747-10085.981Equus_caballus
ENSLAFG00000006532PRDM59997.271ENSECAG00000011516PRDM58997.271Equus_caballus
ENSLAFG00000006532PRDM59988.168ENSEEUG00000010306PRDM510086.458Erinaceus_europaeus
ENSLAFG00000006532PRDM59980.617ENSELUG00000005894prdm59374.770Esox_lucius
ENSLAFG00000006532PRDM510097.663ENSFCAG00000025656PRDM510097.663Felis_catus
ENSLAFG00000006532PRDM59573.209ENSFALG00000008381PRDM510073.209Ficedula_albicollis
ENSLAFG00000006532PRDM510098.418ENSFDAG00000021361PRDM510097.333Fukomys_damarensis
ENSLAFG00000006532PRDM59982.595ENSFHEG00000013040prdm510081.167Fundulus_heteroclitus
ENSLAFG00000006532PRDM510069.737ENSGMOG00000012038prdm510069.737Gadus_morhua
ENSLAFG00000006532PRDM59984.177ENSGALG00000011963PRDM510081.675Gallus_gallus
ENSLAFG00000006532PRDM59980.617ENSGAFG00000019233prdm510077.500Gambusia_affinis
ENSLAFG00000006532PRDM59981.313ENSGAGG00000020362PRDM59978.544Gopherus_agassizii
ENSLAFG00000006532PRDM510099.051ENSGGOG00000013562PRDM510098.000Gorilla_gorilla
ENSLAFG00000006532PRDM59982.911ENSHBUG00000023375prdm510081.167Haplochromis_burtoni
ENSLAFG00000006532PRDM510086.811ENSHGLG00000003010PRDM510090.818Heterocephalus_glaber_female
ENSLAFG00000006532PRDM510098.101ENSHGLG00100003696PRDM510097.333Heterocephalus_glaber_male
ENSLAFG00000006532PRDM59982.595ENSHCOG00000012131prdm59976.387Hippocampus_comes
ENSLAFG00000006532PRDM59983.228ENSIPUG00000001248prdm510081.333Ictalurus_punctatus
ENSLAFG00000006532PRDM59793.333ENSSTOG00000004741PRDM510093.333Ictidomys_tridecemlineatus
ENSLAFG00000006532PRDM59796.667ENSJJAG00000011464Prdm510096.667Jaculus_jaculus
ENSLAFG00000006532PRDM59982.595ENSKMAG00000013663prdm510081.333Kryptolebias_marmoratus
ENSLAFG00000006532PRDM59982.595ENSLBEG00000022736prdm510077.021Labrus_bergylta
ENSLAFG00000006532PRDM510084.810ENSLACG00000009187PRDM59980.069Latimeria_chalumnae
ENSLAFG00000006532PRDM59981.962ENSLOCG00000009778prdm59977.338Lepisosteus_oculatus
ENSLAFG00000006532PRDM510099.051ENSMFAG00000045845PRDM510098.000Macaca_fascicularis
ENSLAFG00000006532PRDM510099.051ENSMMUG00000003249PRDM510098.000Macaca_mulatta
ENSLAFG00000006532PRDM510099.051ENSMNEG00000019018PRDM510098.000Macaca_nemestrina
ENSLAFG00000006532PRDM59597.183ENSMLEG00000023145PRDM510097.183Mandrillus_leucophaeus
ENSLAFG00000006532PRDM59982.911ENSMAMG00000013419prdm510078.744Mastacembelus_armatus
ENSLAFG00000006532PRDM59982.911ENSMZEG00005020645prdm510081.167Maylandia_zebra
ENSLAFG00000006532PRDM59984.177ENSMGAG00000010710PRDM510081.063Meleagris_gallopavo
ENSLAFG00000006532PRDM510096.835ENSMAUG00000006768Prdm510094.667Mesocricetus_auratus
ENSLAFG00000006532PRDM510098.101ENSMICG00000001459PRDM510097.333Microcebus_murinus
ENSLAFG00000006532PRDM510096.835ENSMOCG00000016267Prdm510094.667Microtus_ochrogaster
ENSLAFG00000006532PRDM510081.333ENSMMOG00000006035prdm510081.333Mola_mola
ENSLAFG00000006532PRDM59983.544ENSMODG00000018942PRDM510077.567Monodelphis_domestica
ENSLAFG00000006532PRDM59982.595ENSMALG00000013934prdm510078.369Monopterus_albus
ENSLAFG00000006532PRDM510097.152MGP_CAROLIEiJ_G0028463Prdm510095.333Mus_caroli
ENSLAFG00000006532PRDM510096.835ENSMUSG00000029913Prdm510095.333Mus_musculus
ENSLAFG00000006532PRDM510097.152MGP_PahariEiJ_G0022203Prdm510095.333Mus_pahari
ENSLAFG00000006532PRDM510096.835MGP_SPRETEiJ_G0029467Prdm510095.333Mus_spretus
ENSLAFG00000006532PRDM510092.540ENSMPUG00000017415PRDM510092.540Mustela_putorius_furo
ENSLAFG00000006532PRDM59984.375ENSMLUG00000006097PRDM510081.315Myotis_lucifugus
ENSLAFG00000006532PRDM510097.468ENSNGAG00000018317Prdm510095.333Nannospalax_galili
ENSLAFG00000006532PRDM510071.921ENSNBRG00000004976prdm510077.409Neolamprologus_brichardi
ENSLAFG00000006532PRDM510099.051ENSNLEG00000009107PRDM510098.000Nomascus_leucogenys
ENSLAFG00000006532PRDM59976.923ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSLAFG00000006532PRDM59595.437ENSOPRG00000011066-8970.722Ochotona_princeps
ENSLAFG00000006532PRDM59998.418ENSODEG00000009133PRDM510097.333Octodon_degus
ENSLAFG00000006532PRDM59982.911ENSONIG00000003111prdm59977.496Oreochromis_niloticus
ENSLAFG00000006532PRDM59981.407ENSOANG00000015109PRDM59780.325Ornithorhynchus_anatinus
ENSLAFG00000006532PRDM58188.889ENSOANG00000006197-10088.889Ornithorhynchus_anatinus
ENSLAFG00000006532PRDM59977.848ENSOCUG00000013454PRDM510084.838Oryctolagus_cuniculus
ENSLAFG00000006532PRDM59982.595ENSORLG00000016247prdm510081.167Oryzias_latipes
ENSLAFG00000006532PRDM59982.595ENSORLG00020018051prdm510081.333Oryzias_latipes_hni
ENSLAFG00000006532PRDM59982.595ENSORLG00015013760prdm510081.167Oryzias_latipes_hsok
ENSLAFG00000006532PRDM59982.911ENSOMEG00000005143prdm510081.198Oryzias_melastigma
ENSLAFG00000006532PRDM59977.215ENSOGAG00000009996PRDM59882.991Otolemur_garnettii
ENSLAFG00000006532PRDM59990.226ENSOARG00000015473PRDM510089.059Ovis_aries
ENSLAFG00000006532PRDM59597.276ENSPPAG00000043045PRDM510097.276Pan_paniscus
ENSLAFG00000006532PRDM510097.663ENSPPRG00000001020PRDM510097.663Panthera_pardus
ENSLAFG00000006532PRDM59597.359ENSPTIG00000010807PRDM59597.359Panthera_tigris_altaica
ENSLAFG00000006532PRDM510099.051ENSPTRG00000016403PRDM510098.000Pan_troglodytes
ENSLAFG00000006532PRDM510099.051ENSPANG00000023612PRDM510098.000Papio_anubis
ENSLAFG00000006532PRDM59453.430ENSPKIG00000015492prdm510051.613Paramormyrops_kingsleyae
ENSLAFG00000006532PRDM510084.810ENSPSIG00000013505PRDM510080.885Pelodiscus_sinensis
ENSLAFG00000006532PRDM59980.696ENSPMGG00000012622prdm510077.833Periophthalmus_magnuspinnatus
ENSLAFG00000006532PRDM59966.160ENSPMAG00000005248prdm510070.342Petromyzon_marinus
ENSLAFG00000006532PRDM59876.203ENSPFOG00000018630prdm59977.005Poecilia_formosa
ENSLAFG00000006532PRDM59982.911ENSPLAG00000014148prdm510077.460Poecilia_latipinna
ENSLAFG00000006532PRDM59982.911ENSPMEG00000018002prdm510081.500Poecilia_mexicana
ENSLAFG00000006532PRDM59982.911ENSPREG00000018366prdm510081.500Poecilia_reticulata
ENSLAFG00000006532PRDM510092.381ENSPPYG00000015031PRDM510092.381Pongo_abelii
ENSLAFG00000006532PRDM59989.557ENSPCAG00000011671PRDM510087.145Procavia_capensis
ENSLAFG00000006532PRDM510098.101ENSPCOG00000022828PRDM510097.333Propithecus_coquereli
ENSLAFG00000006532PRDM59988.291ENSPVAG00000012309PRDM510084.474Pteropus_vampyrus
ENSLAFG00000006532PRDM59982.911ENSPNYG00000012194prdm510081.333Pundamilia_nyererei
ENSLAFG00000006532PRDM59982.911ENSPNAG00000026181prdm510081.000Pygocentrus_nattereri
ENSLAFG00000006532PRDM59978.481ENSPNAG00000023191-9972.449Pygocentrus_nattereri
ENSLAFG00000006532PRDM59989.408ENSRNOG00000023679Prdm59989.408Rattus_norvegicus
ENSLAFG00000006532PRDM510099.051ENSRBIG00000041307PRDM510098.000Rhinopithecus_bieti
ENSLAFG00000006532PRDM59485.047ENSRROG00000035343PRDM510086.268Rhinopithecus_roxellana
ENSLAFG00000006532PRDM510098.734ENSSBOG00000022100PRDM510098.000Saimiri_boliviensis_boliviensis
ENSLAFG00000006532PRDM59981.057ENSSHAG00000003250PRDM510075.615Sarcophilus_harrisii
ENSLAFG00000006532PRDM59982.595ENSSFOG00015020478prdm510075.447Scleropages_formosus
ENSLAFG00000006532PRDM59982.595ENSSMAG00000018844prdm510081.500Scophthalmus_maximus
ENSLAFG00000006532PRDM59982.911ENSSDUG00000020397prdm510081.500Seriola_dumerili
ENSLAFG00000006532PRDM59982.911ENSSLDG00000013353prdm510081.500Seriola_lalandi_dorsalis
ENSLAFG00000006532PRDM59998.291ENSSARG00000014129-6898.291Sorex_araneus
ENSLAFG00000006532PRDM510090.190ENSSPUG00000009941PRDM510090.000Sphenodon_punctatus
ENSLAFG00000006532PRDM59982.595ENSSPAG00000013866prdm510077.338Stegastes_partitus
ENSLAFG00000006532PRDM510097.997ENSSSCG00000009101PRDM510097.997Sus_scrofa
ENSLAFG00000006532PRDM59984.494ENSTGUG00000001920PRDM510080.801Taeniopygia_guttata
ENSLAFG00000006532PRDM59982.278ENSTRUG00000013850prdm510080.699Takifugu_rubripes
ENSLAFG00000006532PRDM59874.297ENSTNIG00000005901prdm510065.890Tetraodon_nigroviridis
ENSLAFG00000006532PRDM59583.836ENSTBEG00000015386PRDM58684.110Tupaia_belangeri
ENSLAFG00000006532PRDM510092.063ENSTTRG00000010996PRDM510092.063Tursiops_truncatus
ENSLAFG00000006532PRDM59597.436ENSUAMG00000009994PRDM58496.296Ursus_americanus
ENSLAFG00000006532PRDM59599.367ENSUMAG00000003733PRDM59997.711Ursus_maritimus
ENSLAFG00000006532PRDM59783.333ENSVPAG00000007435PRDM510083.333Vicugna_pacos
ENSLAFG00000006532PRDM59992.722ENSVVUG00000013192PRDM510092.504Vulpes_vulpes
ENSLAFG00000006532PRDM510076.387ENSXETG00000002101prdm510076.387Xenopus_tropicalis
ENSLAFG00000006532PRDM59982.911ENSXCOG00000008567prdm510081.833Xiphophorus_couchianus
ENSLAFG00000006532PRDM59982.911ENSXMAG00000013825prdm510081.833Xiphophorus_maculatus

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