EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000006598 (Gene tree)
Gene ID: -
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 23110 bases
Position: chrscaffold_5:35066177-35089286
Accession: 100677343
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000028623	RRM_1	PF00076.22	1.4e-19	1	1
ENSLAFP00000005539	RRM_1	PF00076.22	1.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000006597	TRA2A-202	852	-	ENSLAFP00000005539	283 (aa)	XP_010585517	G3SYG5
ENSLAFT00000028968	TRA2A-201	858	-	ENSLAFP00000028623	285 (aa)	-	G3ULB4

Gene Model

Click here to download ENSLAFG00000006598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000006598	TRA2A	60	65.957	ENSLAFG00000017165	TRA2B	53	72.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006598	TRA2A	100	99.647	ENSG00000164548	TRA2A	100	99.647	Homo_sapiens
ENSLAFG00000006598	TRA2A	90	75.000	ENSAPOG00000017425	tra2a	90	75.000	Acanthochromis_polyacanthus
ENSLAFG00000006598	TRA2A	95	97.426	ENSAMEG00000003501	TRA2A	84	97.426	Ailuropoda_melanoleuca
ENSLAFG00000006598	TRA2A	54	86.928	ENSACIG00000001333	tra2a	79	86.928	Amphilophus_citrinellus
ENSLAFG00000006598	TRA2A	90	75.735	ENSAOCG00000015445	tra2a	90	75.735	Amphiprion_ocellaris
ENSLAFG00000006598	TRA2A	90	75.735	ENSAPEG00000018557	tra2a	90	75.735	Amphiprion_percula
ENSLAFG00000006598	TRA2A	90	77.206	ENSATEG00000000671	tra2a	90	77.206	Anabas_testudineus
ENSLAFG00000006598	TRA2A	95	93.704	ENSAPLG00000013689	TRA2A	100	93.704	Anas_platyrhynchos
ENSLAFG00000006598	TRA2A	100	95.088	ENSACAG00000013502	TRA2A	100	95.088	Anolis_carolinensis
ENSLAFG00000006598	TRA2A	90	78.676	ENSACLG00000024845	tra2a	90	78.676	Astatotilapia_calliptera
ENSLAFG00000006598	TRA2A	60	90.173	ENSAMXG00000005553	tra2a	98	81.224	Astyanax_mexicanus
ENSLAFG00000006598	TRA2A	100	99.293	ENSBTAG00000012622	TRA2A	100	99.293	Bos_taurus
ENSLAFG00000006598	TRA2A	94	97.736	ENSCJAG00000045802	-	100	97.736	Callithrix_jacchus
ENSLAFG00000006598	TRA2A	100	99.647	ENSCJAG00000001509	-	100	99.647	Callithrix_jacchus
ENSLAFG00000006598	TRA2A	99	99.286	ENSCAFG00000002788	TRA2A	100	99.286	Canis_familiaris
ENSLAFG00000006598	TRA2A	90	98.431	ENSCAFG00020002745	TRA2A	95	98.431	Canis_lupus_dingo
ENSLAFG00000006598	TRA2A	100	99.647	ENSTSYG00000000388	TRA2A	100	99.647	Carlito_syrichta
ENSLAFG00000006598	TRA2A	86	86.008	ENSCAPG00000017377	TRA2A	87	86.364	Cavia_aperea
ENSLAFG00000006598	TRA2A	100	99.647	ENSCPOG00000010739	TRA2A	100	99.647	Cavia_porcellus
ENSLAFG00000006598	TRA2A	100	99.647	ENSCCAG00000019576	TRA2A	100	99.647	Cebus_capucinus
ENSLAFG00000006598	TRA2A	100	99.647	ENSCATG00000041219	TRA2A	100	99.647	Cercocebus_atys
ENSLAFG00000006598	TRA2A	100	99.647	ENSCLAG00000007917	TRA2A	100	99.647	Chinchilla_lanigera
ENSLAFG00000006598	TRA2A	99	99.643	ENSCSAG00000014051	TRA2A	99	99.643	Chlorocebus_sabaeus
ENSLAFG00000006598	TRA2A	100	99.293	ENSCHOG00000001130	TRA2A	100	99.293	Choloepus_hoffmanni
ENSLAFG00000006598	TRA2A	100	96.140	ENSCPBG00000022466	TRA2A	100	96.140	Chrysemys_picta_bellii
ENSLAFG00000006598	TRA2A	100	99.647	ENSCANG00000031292	TRA2A	100	99.647	Colobus_angolensis_palliatus
ENSLAFG00000006598	TRA2A	100	98.944	ENSCGRG00001019980	Tra2a	100	98.944	Cricetulus_griseus_chok1gshd
ENSLAFG00000006598	TRA2A	96	98.897	ENSCGRG00000006087	Tra2a	100	98.897	Cricetulus_griseus_crigri
ENSLAFG00000006598	TRA2A	90	71.429	ENSCSEG00000012193	tra2a	90	72.161	Cynoglossus_semilaevis
ENSLAFG00000006598	TRA2A	57	81.481	ENSDARG00000007863	tra2a	90	76.190	Danio_rerio
ENSLAFG00000006598	TRA2A	100	99.293	ENSDNOG00000039446	TRA2A	100	99.293	Dasypus_novemcinctus
ENSLAFG00000006598	TRA2A	100	98.940	ENSDORG00000009361	Tra2a	100	98.940	Dipodomys_ordii
ENSLAFG00000006598	TRA2A	100	82.578	ENSETEG00000007250	TRA2A	100	82.578	Echinops_telfairi
ENSLAFG00000006598	TRA2A	100	99.293	ENSEASG00005022002	TRA2A	100	99.293	Equus_asinus_asinus
ENSLAFG00000006598	TRA2A	100	99.293	ENSECAG00000011508	TRA2A	100	99.293	Equus_caballus
ENSLAFG00000006598	TRA2A	100	98.587	ENSEEUG00000015674	TRA2A	100	98.587	Erinaceus_europaeus
ENSLAFG00000006598	TRA2A	76	74.576	ENSELUG00000005846	tra2a	91	69.128	Esox_lucius
ENSLAFG00000006598	TRA2A	100	99.293	ENSFCAG00000005361	TRA2A	100	99.293	Felis_catus
ENSLAFG00000006598	TRA2A	96	94.465	ENSFALG00000009605	TRA2A	100	94.465	Ficedula_albicollis
ENSLAFG00000006598	TRA2A	100	99.647	ENSFDAG00000004949	TRA2A	100	99.647	Fukomys_damarensis
ENSLAFG00000006598	TRA2A	90	70.036	ENSGMOG00000013740	tra2a	91	70.036	Gadus_morhua
ENSLAFG00000006598	TRA2A	100	94.035	ENSGALG00000010973	TRA2A	100	94.035	Gallus_gallus
ENSLAFG00000006598	TRA2A	90	75.581	ENSGACG00000006878	tra2a	89	75.969	Gasterosteus_aculeatus
ENSLAFG00000006598	TRA2A	100	95.439	ENSGAGG00000005793	TRA2A	100	95.439	Gopherus_agassizii
ENSLAFG00000006598	TRA2A	100	99.647	ENSGGOG00000009053	TRA2A	100	99.647	Gorilla_gorilla
ENSLAFG00000006598	TRA2A	90	79.412	ENSHBUG00000018234	tra2a	90	79.412	Haplochromis_burtoni
ENSLAFG00000006598	TRA2A	100	99.647	ENSHGLG00000012168	TRA2A	100	99.647	Heterocephalus_glaber_female
ENSLAFG00000006598	TRA2A	100	99.647	ENSHGLG00100014577	TRA2A	100	99.647	Heterocephalus_glaber_male
ENSLAFG00000006598	TRA2A	64	64.921	ENSHCOG00000006314	tra2a	66	66.892	Hippocampus_comes
ENSLAFG00000006598	TRA2A	62	61.979	ENSHCOG00000006320	tra2a	96	61.979	Hippocampus_comes
ENSLAFG00000006598	TRA2A	100	99.647	ENSSTOG00000012073	TRA2A	100	99.647	Ictidomys_tridecemlineatus
ENSLAFG00000006598	TRA2A	100	98.940	ENSJJAG00000022787	Tra2a	100	98.940	Jaculus_jaculus
ENSLAFG00000006598	TRA2A	85	75.862	ENSLBEG00000005297	tra2a	88	76.628	Labrus_bergylta
ENSLAFG00000006598	TRA2A	90	88.189	ENSLACG00000014765	TRA2A	90	88.189	Latimeria_chalumnae
ENSLAFG00000006598	TRA2A	90	77.206	ENSLOCG00000011615	-	90	77.206	Lepisosteus_oculatus
ENSLAFG00000006598	TRA2A	100	99.647	ENSMFAG00000043211	TRA2A	100	99.647	Macaca_fascicularis
ENSLAFG00000006598	TRA2A	100	99.647	ENSMMUG00000006286	TRA2A	100	99.647	Macaca_mulatta
ENSLAFG00000006598	TRA2A	100	99.647	ENSMNEG00000040670	TRA2A	100	99.647	Macaca_nemestrina
ENSLAFG00000006598	TRA2A	100	99.647	ENSMLEG00000032154	TRA2A	100	99.647	Mandrillus_leucophaeus
ENSLAFG00000006598	TRA2A	76	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSLAFG00000006598	TRA2A	90	78.676	ENSMZEG00005009142	tra2a	90	78.676	Maylandia_zebra
ENSLAFG00000006598	TRA2A	96	93.773	ENSMGAG00000010514	TRA2A	100	93.773	Meleagris_gallopavo
ENSLAFG00000006598	TRA2A	100	99.293	ENSMICG00000043639	-	100	99.451	Microcebus_murinus
ENSLAFG00000006598	TRA2A	100	77.032	ENSMICG00000036849	-	88	76.378	Microcebus_murinus
ENSLAFG00000006598	TRA2A	70	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSLAFG00000006598	TRA2A	63	90.449	ENSMOCG00000010249	-	63	89.881	Microtus_ochrogaster
ENSLAFG00000006598	TRA2A	87	79.352	ENSMMOG00000020174	tra2a	83	79.253	Mola_mola
ENSLAFG00000006598	TRA2A	100	97.880	ENSMODG00000000807	TRA2A	100	97.880	Monodelphis_domestica
ENSLAFG00000006598	TRA2A	85	77.308	ENSMALG00000020875	tra2a	90	77.372	Monopterus_albus
ENSLAFG00000006598	TRA2A	100	98.944	ENSMUSG00000029817	Tra2a	100	98.944	Mus_musculus
ENSLAFG00000006598	TRA2A	100	98.592	MGP_PahariEiJ_G0022115	Tra2a	100	98.592	Mus_pahari
ENSLAFG00000006598	TRA2A	100	98.944	MGP_SPRETEiJ_G0029368	Tra2a	100	98.944	Mus_spretus
ENSLAFG00000006598	TRA2A	100	98.940	ENSMPUG00000013480	TRA2A	100	98.940	Mustela_putorius_furo
ENSLAFG00000006598	TRA2A	100	98.940	ENSMLUG00000013972	TRA2A	100	98.940	Myotis_lucifugus
ENSLAFG00000006598	TRA2A	100	98.233	ENSNGAG00000023805	Tra2a	100	98.233	Nannospalax_galili
ENSLAFG00000006598	TRA2A	54	90.196	ENSNBRG00000005992	tra2a	73	90.196	Neolamprologus_brichardi
ENSLAFG00000006598	TRA2A	100	99.647	ENSNLEG00000014794	TRA2A	100	99.647	Nomascus_leucogenys
ENSLAFG00000006598	TRA2A	64	71.429	ENSNLEG00000029659	-	88	75.817	Nomascus_leucogenys
ENSLAFG00000006598	TRA2A	100	97.880	ENSMEUG00000001202	TRA2A	100	97.880	Notamacropus_eugenii
ENSLAFG00000006598	TRA2A	100	98.233	ENSOPRG00000007606	TRA2A	100	98.233	Ochotona_princeps
ENSLAFG00000006598	TRA2A	100	99.647	ENSODEG00000008335	TRA2A	100	99.647	Octodon_degus
ENSLAFG00000006598	TRA2A	90	78.545	ENSONIG00000004503	tra2a	90	78.545	Oreochromis_niloticus
ENSLAFG00000006598	TRA2A	89	88.760	ENSOANG00000014202	TRA2A	90	87.597	Ornithorhynchus_anatinus
ENSLAFG00000006598	TRA2A	100	99.293	ENSOCUG00000024139	TRA2A	100	99.293	Oryctolagus_cuniculus
ENSLAFG00000006598	TRA2A	82	69.397	ENSORLG00000022191	tra2a	60	73.810	Oryzias_latipes
ENSLAFG00000006598	TRA2A	82	68.966	ENSORLG00020003490	tra2a	60	73.214	Oryzias_latipes_hni
ENSLAFG00000006598	TRA2A	82	68.534	ENSORLG00015015485	tra2a	60	72.619	Oryzias_latipes_hsok
ENSLAFG00000006598	TRA2A	82	67.672	ENSOMEG00000017864	tra2a	60	71.429	Oryzias_melastigma
ENSLAFG00000006598	TRA2A	99	96.797	ENSOGAG00000009733	TRA2A	99	96.797	Otolemur_garnettii
ENSLAFG00000006598	TRA2A	100	90.526	ENSOARG00000002323	-	100	90.526	Ovis_aries
ENSLAFG00000006598	TRA2A	100	98.233	ENSOARG00000013147	TRA2A	100	98.233	Ovis_aries
ENSLAFG00000006598	TRA2A	99	99.643	ENSPPAG00000034382	TRA2A	99	99.643	Pan_paniscus
ENSLAFG00000006598	TRA2A	100	99.293	ENSPPRG00000015216	TRA2A	100	99.293	Panthera_pardus
ENSLAFG00000006598	TRA2A	100	99.293	ENSPTIG00000021114	TRA2A	100	99.293	Panthera_tigris_altaica
ENSLAFG00000006598	TRA2A	100	99.647	ENSPTRG00000046098	-	100	99.647	Pan_troglodytes
ENSLAFG00000006598	TRA2A	100	99.647	ENSPTRG00000018988	TRA2A	100	99.647	Pan_troglodytes
ENSLAFG00000006598	TRA2A	100	99.647	ENSPANG00000014541	TRA2A	100	99.647	Papio_anubis
ENSLAFG00000006598	TRA2A	90	76.103	ENSPKIG00000012298	tra2a	90	75.368	Paramormyrops_kingsleyae
ENSLAFG00000006598	TRA2A	88	94.000	ENSPSIG00000014993	TRA2A	90	94.000	Pelodiscus_sinensis
ENSLAFG00000006598	TRA2A	100	99.293	ENSPEMG00000008564	-	100	99.293	Peromyscus_maniculatus_bairdii
ENSLAFG00000006598	TRA2A	63	69.274	ENSPMAG00000007947	tra2a	59	69.277	Petromyzon_marinus
ENSLAFG00000006598	TRA2A	100	97.880	ENSPCIG00000007917	TRA2A	100	97.880	Phascolarctos_cinereus
ENSLAFG00000006598	TRA2A	100	99.647	ENSPPYG00000017728	TRA2A	100	99.647	Pongo_abelii
ENSLAFG00000006598	TRA2A	99	99.286	ENSPCAG00000004148	TRA2A	100	99.286	Procavia_capensis
ENSLAFG00000006598	TRA2A	100	85.159	ENSPCOG00000020465	TRA2A	100	85.159	Propithecus_coquereli
ENSLAFG00000006598	TRA2A	100	99.647	ENSPVAG00000011298	TRA2A	100	99.647	Pteropus_vampyrus
ENSLAFG00000006598	TRA2A	54	88.462	ENSPNYG00000020134	tra2a	76	88.462	Pundamilia_nyererei
ENSLAFG00000006598	TRA2A	90	73.162	ENSPNAG00000000482	tra2a	90	70.956	Pygocentrus_nattereri
ENSLAFG00000006598	TRA2A	100	98.944	ENSRNOG00000009156	Tra2a	100	98.944	Rattus_norvegicus
ENSLAFG00000006598	TRA2A	100	99.293	ENSRROG00000030758	TRA2A	100	99.451	Rhinopithecus_roxellana
ENSLAFG00000006598	TRA2A	100	99.647	ENSSBOG00000031562	TRA2A	100	99.647	Saimiri_boliviensis_boliviensis
ENSLAFG00000006598	TRA2A	89	95.219	ENSSHAG00000005727	TRA2A	88	95.219	Sarcophilus_harrisii
ENSLAFG00000006598	TRA2A	90	79.921	ENSSFOG00015014004	tra2a	90	74.632	Scleropages_formosus
ENSLAFG00000006598	TRA2A	93	73.498	ENSSMAG00000014242	tra2a	90	73.162	Scophthalmus_maximus
ENSLAFG00000006598	TRA2A	90	83.984	ENSSDUG00000005610	tra2a	89	83.984	Seriola_dumerili
ENSLAFG00000006598	TRA2A	54	87.582	ENSSLDG00000025577	tra2a	81	87.582	Seriola_lalandi_dorsalis
ENSLAFG00000006598	TRA2A	80	100.000	ENSSARG00000012900	TRA2A	80	100.000	Sorex_araneus
ENSLAFG00000006598	TRA2A	100	96.864	ENSSPUG00000006143	TRA2A	100	96.864	Sphenodon_punctatus
ENSLAFG00000006598	TRA2A	90	78.676	ENSSPAG00000004184	tra2a	90	78.676	Stegastes_partitus
ENSLAFG00000006598	TRA2A	100	99.293	ENSSSCG00000015387	TRA2A	100	99.293	Sus_scrofa
ENSLAFG00000006598	TRA2A	60	89.474	ENSTGUG00000002795	TRA2A	62	88.690	Taeniopygia_guttata
ENSLAFG00000006598	TRA2A	100	83.039	ENSTBEG00000013773	TRA2A	100	83.039	Tupaia_belangeri
ENSLAFG00000006598	TRA2A	100	98.940	ENSTTRG00000008922	TRA2A	100	98.940	Tursiops_truncatus
ENSLAFG00000006598	TRA2A	64	98.901	ENSUMAG00000001181	TRA2A	94	98.901	Ursus_maritimus
ENSLAFG00000006598	TRA2A	100	85.159	ENSVPAG00000001829	TRA2A	100	85.159	Vicugna_pacos
ENSLAFG00000006598	TRA2A	100	99.293	ENSVVUG00000001045	TRA2A	100	99.293	Vulpes_vulpes
ENSLAFG00000006598	TRA2A	90	83.650	ENSXETG00000007397	tra2a	90	83.650	Xenopus_tropicalis