EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000006682 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 1306 bases
Position: chrscaffold_19:42869461-42870766
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005611	RRM_1	PF00076.22	1.4e-13	1	1
ENSLAFP00000024295	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000006681	SRSF6-202	777	-	ENSLAFP00000005611	258 (aa)	-	G3SYM1
ENSLAFT00000034613	SRSF6-201	786	-	ENSLAFP00000024295	261 (aa)	-	G3U8Y7

Gene Model

Click here to download ENSLAFG00000006682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006682	SRSF6	89	95.652	ENSG00000124193	SRSF6	69	95.816	Homo_sapiens
ENSLAFG00000006682	SRSF6	91	96.581	ENSAMEG00000003710	SRSF6	69	96.234	Ailuropoda_melanoleuca
ENSLAFG00000006682	SRSF6	89	85.281	ENSACAG00000002061	SRSF6	67	84.810	Anolis_carolinensis
ENSLAFG00000006682	SRSF6	89	94.348	ENSANAG00000024080	SRSF6	69	94.561	Aotus_nancymaae
ENSLAFG00000006682	SRSF6	88	96.476	ENSBTAG00000008527	SRSF6	69	96.234	Bos_taurus
ENSLAFG00000006682	SRSF6	71	96.703	ENSCJAG00000048403	SRSF6	67	96.703	Callithrix_jacchus
ENSLAFG00000006682	SRSF6	89	96.507	ENSCAFG00000009289	SRSF6	69	96.234	Canis_familiaris
ENSLAFG00000006682	SRSF6	89	96.507	ENSCAFG00020013559	SRSF6	69	96.234	Canis_lupus_dingo
ENSLAFG00000006682	SRSF6	100	95.753	ENSCHIG00000009148	-	75	95.753	Capra_hircus
ENSLAFG00000006682	SRSF6	100	95.753	ENSCHIG00000015890	-	75	95.753	Capra_hircus
ENSLAFG00000006682	SRSF6	100	95.769	ENSTSYG00000026476	SRSF6	88	95.769	Carlito_syrichta
ENSLAFG00000006682	SRSF6	89	94.783	ENSCCAG00000026018	-	69	94.979	Cebus_capucinus
ENSLAFG00000006682	SRSF6	89	95.197	ENSCATG00000030794	SRSF6	69	94.979	Cercocebus_atys
ENSLAFG00000006682	SRSF6	89	94.323	ENSCLAG00000010247	SRSF6	70	94.142	Chinchilla_lanigera
ENSLAFG00000006682	SRSF6	89	95.197	ENSCSAG00000014022	SRSF6	69	94.979	Chlorocebus_sabaeus
ENSLAFG00000006682	SRSF6	91	95.319	ENSCHOG00000000561	SRSF6	69	95.397	Choloepus_hoffmanni
ENSLAFG00000006682	SRSF6	87	86.726	ENSCPBG00000018200	SRSF6	67	85.654	Chrysemys_picta_bellii
ENSLAFG00000006682	SRSF6	92	95.798	ENSCANG00000042529	-	81	95.397	Colobus_angolensis_palliatus
ENSLAFG00000006682	SRSF6	89	94.760	ENSCANG00000037774	-	69	94.561	Colobus_angolensis_palliatus
ENSLAFG00000006682	SRSF6	89	93.886	ENSCGRG00001022339	Srsf6	70	94.142	Cricetulus_griseus_chok1gshd
ENSLAFG00000006682	SRSF6	76	93.333	ENSCGRG00000006618	Srsf6	92	93.367	Cricetulus_griseus_crigri
ENSLAFG00000006682	SRSF6	89	93.450	ENSDNOG00000008410	SRSF6	69	93.697	Dasypus_novemcinctus
ENSLAFG00000006682	SRSF6	89	95.652	ENSDORG00000028378	Srsf6	69	95.816	Dipodomys_ordii
ENSLAFG00000006682	SRSF6	87	92.889	ENSETEG00000006221	SRSF6	70	91.632	Echinops_telfairi
ENSLAFG00000006682	SRSF6	89	70.306	ENSEASG00005023429	SRSF6	69	95.397	Equus_asinus_asinus
ENSLAFG00000006682	SRSF6	89	70.306	ENSECAG00000023932	SRSF6	69	95.397	Equus_caballus
ENSLAFG00000006682	SRSF6	76	92.308	ENSEEUG00000002324	SRSF6	90	91.919	Erinaceus_europaeus
ENSLAFG00000006682	SRSF6	89	96.507	ENSFCAG00000032814	SRSF6	69	96.234	Felis_catus
ENSLAFG00000006682	SRSF6	92	94.118	ENSFDAG00000012191	SRSF6	82	93.724	Fukomys_damarensis
ENSLAFG00000006682	SRSF6	87	86.726	ENSGAGG00000003238	SRSF6	67	85.654	Gopherus_agassizii
ENSLAFG00000006682	SRSF6	58	88.667	ENSGGOG00000043139	-	99	83.696	Gorilla_gorilla
ENSLAFG00000006682	SRSF6	89	95.652	ENSGGOG00000009808	SRSF6	69	95.816	Gorilla_gorilla
ENSLAFG00000006682	SRSF6	89	94.323	ENSHGLG00000007348	SRSF6	70	94.142	Heterocephalus_glaber_female
ENSLAFG00000006682	SRSF6	92	94.538	ENSHGLG00100005043	SRSF6	82	94.142	Heterocephalus_glaber_male
ENSLAFG00000006682	SRSF6	89	94.783	ENSSTOG00000010866	SRSF6	69	94.979	Ictidomys_tridecemlineatus
ENSLAFG00000006682	SRSF6	75	91.192	ENSJJAG00000020690	Srsf6	91	90.256	Jaculus_jaculus
ENSLAFG00000006682	SRSF6	89	95.197	ENSMFAG00000036925	SRSF6	69	94.979	Macaca_fascicularis
ENSLAFG00000006682	SRSF6	89	95.197	ENSMMUG00000006742	SRSF6	69	94.979	Macaca_mulatta
ENSLAFG00000006682	SRSF6	88	94.273	ENSMNEG00000038270	-	69	94.142	Macaca_nemestrina
ENSLAFG00000006682	SRSF6	89	95.197	ENSMNEG00000027392	-	69	94.979	Macaca_nemestrina
ENSLAFG00000006682	SRSF6	76	94.872	ENSMLEG00000031524	SRSF6	91	94.388	Mandrillus_leucophaeus
ENSLAFG00000006682	SRSF6	89	95.652	ENSMICG00000008537	SRSF6	69	95.816	Microcebus_murinus
ENSLAFG00000006682	SRSF6	76	93.333	ENSMOCG00000018738	Srsf6	92	93.367	Microtus_ochrogaster
ENSLAFG00000006682	SRSF6	89	93.450	MGP_CAROLIEiJ_G0024606	Srsf6	70	93.305	Mus_caroli
ENSLAFG00000006682	SRSF6	89	93.886	ENSMUSG00000016921	Srsf6	70	93.724	Mus_musculus
ENSLAFG00000006682	SRSF6	89	93.886	MGP_PahariEiJ_G0026050	Srsf6	70	93.305	Mus_pahari
ENSLAFG00000006682	SRSF6	89	93.886	MGP_SPRETEiJ_G0025528	Srsf6	70	93.724	Mus_spretus
ENSLAFG00000006682	SRSF6	78	97.512	ENSMPUG00000017692	SRSF6	69	97.512	Mustela_putorius_furo
ENSLAFG00000006682	SRSF6	91	95.339	ENSMLUG00000016618	SRSF6	69	94.979	Myotis_lucifugus
ENSLAFG00000006682	SRSF6	89	92.576	ENSNGAG00000017560	Srsf6	70	91.632	Nannospalax_galili
ENSLAFG00000006682	SRSF6	89	95.652	ENSNLEG00000006524	SRSF6	69	95.816	Nomascus_leucogenys
ENSLAFG00000006682	SRSF6	93	96.653	ENSOPRG00000002017	-	93	96.653	Ochotona_princeps
ENSLAFG00000006682	SRSF6	79	97.537	ENSOCUG00000009785	-	67	97.537	Oryctolagus_cuniculus
ENSLAFG00000006682	SRSF6	90	94.372	ENSOGAG00000014468	SRSF6	69	94.979	Otolemur_garnettii
ENSLAFG00000006682	SRSF6	90	96.970	ENSOARG00000003117	SRSF6	70	96.653	Ovis_aries
ENSLAFG00000006682	SRSF6	82	85.377	ENSPPAG00000043131	-	70	83.111	Pan_paniscus
ENSLAFG00000006682	SRSF6	89	95.652	ENSPPAG00000034327	-	69	95.816	Pan_paniscus
ENSLAFG00000006682	SRSF6	89	96.507	ENSPPRG00000008917	SRSF6	69	96.234	Panthera_pardus
ENSLAFG00000006682	SRSF6	76	96.410	ENSPTIG00000019153	SRSF6	91	95.918	Panthera_tigris_altaica
ENSLAFG00000006682	SRSF6	82	85.377	ENSPTRG00000046274	-	70	83.111	Pan_troglodytes
ENSLAFG00000006682	SRSF6	89	95.217	ENSPTRG00000044686	-	69	95.397	Pan_troglodytes
ENSLAFG00000006682	SRSF6	89	95.197	ENSPANG00000035224	SRSF6	69	94.979	Papio_anubis
ENSLAFG00000006682	SRSF6	89	95.652	ENSPPYG00000011019	SRSF6	69	95.816	Pongo_abelii
ENSLAFG00000006682	SRSF6	89	96.087	ENSPCOG00000026364	SRSF6	69	96.234	Propithecus_coquereli
ENSLAFG00000006682	SRSF6	89	93.886	ENSPVAG00000015232	SRSF6	69	93.724	Pteropus_vampyrus
ENSLAFG00000006682	SRSF6	89	93.886	ENSRNOG00000006380	Srsf6	70	93.724	Rattus_norvegicus
ENSLAFG00000006682	SRSF6	88	95.154	ENSRBIG00000041414	SRSF6	70	94.979	Rhinopithecus_bieti
ENSLAFG00000006682	SRSF6	89	95.197	ENSRROG00000029989	SRSF6	69	94.979	Rhinopithecus_roxellana
ENSLAFG00000006682	SRSF6	89	94.348	ENSSBOG00000033708	-	69	94.561	Saimiri_boliviensis_boliviensis
ENSLAFG00000006682	SRSF6	92	94.958	ENSSARG00000001602	SRSF6	92	94.142	Sorex_araneus
ENSLAFG00000006682	SRSF6	89	96.507	ENSSSCG00000007362	SRSF6	69	96.234	Sus_scrofa
ENSLAFG00000006682	SRSF6	100	95.769	ENSTBEG00000013448	SRSF6	82	95.769	Tupaia_belangeri
ENSLAFG00000006682	SRSF6	91	96.596	ENSTTRG00000015410	SRSF6	92	96.234	Tursiops_truncatus
ENSLAFG00000006682	SRSF6	89	96.507	ENSUAMG00000003559	SRSF6	69	96.234	Ursus_americanus
ENSLAFG00000006682	SRSF6	76	96.410	ENSUMAG00000001154	SRSF6	91	95.918	Ursus_maritimus
ENSLAFG00000006682	SRSF6	90	95.259	ENSVPAG00000003016	SRSF6	69	94.979	Vicugna_pacos