EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000006979 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 13193 bases
Position: chrscaffold_6:27532018-27545210
Accession: 100655431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005864	zf-C2H2	PF00096.26	8.8e-13	1	2
ENSLAFP00000005864	zf-C2H2	PF00096.26	8.8e-13	2	2
ENSLAFP00000005864	zf-met	PF12874.7	7.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000006980	PRDM12-201	1119	XM_003407564	ENSLAFP00000005864	373 (aa)	XP_003407612	G3SZ86

Gene Model

Click here to download ENSLAFG00000006979's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000006979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000006979	PRDM12	68	42.353	ENSLAFG00000006532	PRDM5	94	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000006979	PRDM12	91	97.353	ENSG00000130711	PRDM12	91	97.353	Homo_sapiens
ENSLAFG00000006979	PRDM12	90	77.809	ENSAPOG00000016051	prdm12b	90	79.143	Acanthochromis_polyacanthus
ENSLAFG00000006979	PRDM12	97	64.228	ENSAPOG00000018234	-	93	65.330	Acanthochromis_polyacanthus
ENSLAFG00000006979	PRDM12	88	93.617	ENSAMEG00000016234	PRDM12	99	93.617	Ailuropoda_melanoleuca
ENSLAFG00000006979	PRDM12	95	75.066	ENSACIG00000005193	-	91	78.571	Amphilophus_citrinellus
ENSLAFG00000006979	PRDM12	90	78.754	ENSACIG00000019578	prdm12b	93	80.692	Amphilophus_citrinellus
ENSLAFG00000006979	PRDM12	90	79.772	ENSAOCG00000015040	prdm12b	90	82.544	Amphiprion_ocellaris
ENSLAFG00000006979	PRDM12	90	80.460	ENSAPEG00000015092	prdm12b	90	82.985	Amphiprion_percula
ENSLAFG00000006979	PRDM12	89	78.070	ENSAPEG00000022849	-	89	77.364	Amphiprion_percula
ENSLAFG00000006979	PRDM12	92	80.523	ENSATEG00000014595	-	96	81.873	Anabas_testudineus
ENSLAFG00000006979	PRDM12	93	97.688	ENSANAG00000020616	PRDM12	100	97.688	Aotus_nancymaae
ENSLAFG00000006979	PRDM12	92	80.172	ENSACLG00000011876	prdm12b	92	80.994	Astatotilapia_calliptera
ENSLAFG00000006979	PRDM12	88	79.827	ENSACLG00000007631	-	87	79.827	Astatotilapia_calliptera
ENSLAFG00000006979	PRDM12	95	79.379	ENSAMXG00000008540	PRDM12	90	82.831	Astyanax_mexicanus
ENSLAFG00000006979	PRDM12	90	86.726	ENSAMXG00000033665	prdm12b	90	87.059	Astyanax_mexicanus
ENSLAFG00000006979	PRDM12	94	98.011	ENSBTAG00000023797	PRDM12	96	98.011	Bos_taurus
ENSLAFG00000006979	PRDM12	94	97.727	ENSCJAG00000020540	PRDM12	96	97.727	Callithrix_jacchus
ENSLAFG00000006979	PRDM12	80	96.970	ENSCAFG00000023076	PRDM12	90	96.970	Canis_familiaris
ENSLAFG00000006979	PRDM12	99	94.624	ENSCAFG00020024046	PRDM12	99	94.624	Canis_lupus_dingo
ENSLAFG00000006979	PRDM12	97	96.667	ENSCHIG00000025005	PRDM12	98	96.667	Capra_hircus
ENSLAFG00000006979	PRDM12	86	96.238	ENSCPOG00000005901	PRDM12	95	96.238	Cavia_porcellus
ENSLAFG00000006979	PRDM12	98	95.082	ENSCCAG00000037485	PRDM12	99	95.082	Cebus_capucinus
ENSLAFG00000006979	PRDM12	98	95.082	ENSCATG00000020327	PRDM12	99	95.082	Cercocebus_atys
ENSLAFG00000006979	PRDM12	91	96.176	ENSCLAG00000005499	PRDM12	92	96.176	Chinchilla_lanigera
ENSLAFG00000006979	PRDM12	91	97.647	ENSCSAG00000014756	PRDM12	92	97.647	Chlorocebus_sabaeus
ENSLAFG00000006979	PRDM12	93	91.643	ENSCPBG00000022628	PRDM12	94	91.765	Chrysemys_picta_bellii
ENSLAFG00000006979	PRDM12	91	97.353	ENSCGRG00001015005	Prdm12	91	97.353	Cricetulus_griseus_chok1gshd
ENSLAFG00000006979	PRDM12	90	81.050	ENSCVAG00000017166	prdm12b	92	81.525	Cyprinodon_variegatus
ENSLAFG00000006979	PRDM12	90	76.685	ENSCVAG00000000944	-	90	76.404	Cyprinodon_variegatus
ENSLAFG00000006979	PRDM12	95	82.692	ENSDARG00000007430	prdm12b	93	84.438	Danio_rerio
ENSLAFG00000006979	PRDM12	91	97.353	ENSDNOG00000042302	PRDM12	92	97.353	Dasypus_novemcinctus
ENSLAFG00000006979	PRDM12	98	59.091	ENSEBUG00000016780	prdm12b	78	64.205	Eptatretus_burgeri
ENSLAFG00000006979	PRDM12	97	96.389	ENSEASG00005008472	PRDM12	98	96.389	Equus_asinus_asinus
ENSLAFG00000006979	PRDM12	97	96.111	ENSECAG00000005933	PRDM12	98	96.111	Equus_caballus
ENSLAFG00000006979	PRDM12	88	81.818	ENSELUG00000013674	PRDM12	89	81.818	Esox_lucius
ENSLAFG00000006979	PRDM12	99	77.573	ENSELUG00000009905	prdm12b	91	83.284	Esox_lucius
ENSLAFG00000006979	PRDM12	98	95.628	ENSFCAG00000043086	PRDM12	99	95.628	Felis_catus
ENSLAFG00000006979	PRDM12	93	91.931	ENSFALG00000001445	PRDM12	84	92.059	Ficedula_albicollis
ENSLAFG00000006979	PRDM12	88	81.287	ENSFHEG00000003944	prdm12b	92	80.814	Fundulus_heteroclitus
ENSLAFG00000006979	PRDM12	94	75.543	ENSFHEG00000007746	-	89	78.797	Fundulus_heteroclitus
ENSLAFG00000006979	PRDM12	91	81.065	ENSGMOG00000011797	prdm12b	94	81.065	Gadus_morhua
ENSLAFG00000006979	PRDM12	93	91.931	ENSGALG00000003895	PRDM12	94	92.059	Gallus_gallus
ENSLAFG00000006979	PRDM12	91	82.891	ENSGAFG00000010827	prdm12b	90	82.891	Gambusia_affinis
ENSLAFG00000006979	PRDM12	93	80.508	ENSGACG00000016713	prdm12b	91	82.216	Gasterosteus_aculeatus
ENSLAFG00000006979	PRDM12	93	91.931	ENSGAGG00000014083	PRDM12	94	92.059	Gopherus_agassizii
ENSLAFG00000006979	PRDM12	91	97.059	ENSGGOG00000010568	PRDM12	91	97.059	Gorilla_gorilla
ENSLAFG00000006979	PRDM12	92	78.552	ENSHBUG00000022878	prdm12b	93	82.029	Haplochromis_burtoni
ENSLAFG00000006979	PRDM12	88	79.827	ENSHBUG00000022537	-	80	79.827	Haplochromis_burtoni
ENSLAFG00000006979	PRDM12	91	95.882	ENSHGLG00000013939	PRDM12	92	95.882	Heterocephalus_glaber_female
ENSLAFG00000006979	PRDM12	91	74.928	ENSHCOG00000021167	-	95	74.855	Hippocampus_comes
ENSLAFG00000006979	PRDM12	88	80.347	ENSHCOG00000003663	prdm12b	89	79.603	Hippocampus_comes
ENSLAFG00000006979	PRDM12	90	85.841	ENSIPUG00000017053	prdm12b	91	85.882	Ictalurus_punctatus
ENSLAFG00000006979	PRDM12	96	76.880	ENSIPUG00000019544	PRDM12	90	81.515	Ictalurus_punctatus
ENSLAFG00000006979	PRDM12	95	95.531	ENSSTOG00000005986	PRDM12	92	95.531	Ictidomys_tridecemlineatus
ENSLAFG00000006979	PRDM12	90	97.321	ENSJJAG00000005424	Prdm12	100	97.321	Jaculus_jaculus
ENSLAFG00000006979	PRDM12	88	79.880	ENSKMAG00000021205	-	92	79.880	Kryptolebias_marmoratus
ENSLAFG00000006979	PRDM12	89	77.410	ENSKMAG00000016921	prdm12b	89	77.686	Kryptolebias_marmoratus
ENSLAFG00000006979	PRDM12	88	82.891	ENSLBEG00000017769	prdm12b	88	84.132	Labrus_bergylta
ENSLAFG00000006979	PRDM12	95	77.562	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSLAFG00000006979	PRDM12	93	88.728	ENSLACG00000017560	PRDM12	94	88.791	Latimeria_chalumnae
ENSLAFG00000006979	PRDM12	91	84.302	ENSLOCG00000005429	prdm12b	93	84.593	Lepisosteus_oculatus
ENSLAFG00000006979	PRDM12	94	97.727	ENSMFAG00000040322	PRDM12	94	97.727	Macaca_fascicularis
ENSLAFG00000006979	PRDM12	98	95.082	ENSMNEG00000037234	PRDM12	99	95.082	Macaca_nemestrina
ENSLAFG00000006979	PRDM12	88	79.825	ENSMAMG00000018988	-	86	80.117	Mastacembelus_armatus
ENSLAFG00000006979	PRDM12	90	80.925	ENSMAMG00000013212	prdm12b	90	81.871	Mastacembelus_armatus
ENSLAFG00000006979	PRDM12	88	79.827	ENSMZEG00005000415	PRDM12	86	79.827	Maylandia_zebra
ENSLAFG00000006979	PRDM12	93	91.931	ENSMGAG00000005438	PRDM12	94	92.059	Meleagris_gallopavo
ENSLAFG00000006979	PRDM12	93	97.118	ENSMAUG00000013040	Prdm12	92	97.059	Mesocricetus_auratus
ENSLAFG00000006979	PRDM12	94	97.727	ENSMICG00000015480	PRDM12	96	97.727	Microcebus_murinus
ENSLAFG00000006979	PRDM12	95	95.225	ENSMOCG00000021026	Prdm12	93	97.126	Microtus_ochrogaster
ENSLAFG00000006979	PRDM12	93	93.948	ENSMODG00000012108	PRDM12	94	94.118	Monodelphis_domestica
ENSLAFG00000006979	PRDM12	92	67.705	ENSMALG00000021901	prdm12b	88	69.822	Monopterus_albus
ENSLAFG00000006979	PRDM12	91	97.059	MGP_CAROLIEiJ_G0023414	Prdm12	92	97.059	Mus_caroli
ENSLAFG00000006979	PRDM12	91	97.059	ENSMUSG00000079466	Prdm12	92	97.059	Mus_musculus
ENSLAFG00000006979	PRDM12	91	97.059	MGP_PahariEiJ_G0024871	Prdm12	92	97.059	Mus_pahari
ENSLAFG00000006979	PRDM12	91	97.059	MGP_SPRETEiJ_G0024331	Prdm12	92	97.059	Mus_spretus
ENSLAFG00000006979	PRDM12	89	96.697	ENSNGAG00000018480	Prdm12	94	96.726	Nannospalax_galili
ENSLAFG00000006979	PRDM12	90	74.928	ENSNBRG00000024312	-	95	74.928	Neolamprologus_brichardi
ENSLAFG00000006979	PRDM12	90	78.814	ENSNBRG00000006727	prdm12b	93	81.322	Neolamprologus_brichardi
ENSLAFG00000006979	PRDM12	93	83.285	ENSMEUG00000003828	PRDM12	94	83.235	Notamacropus_eugenii
ENSLAFG00000006979	PRDM12	90	97.024	ENSOPRG00000008680	PRDM12	100	97.024	Ochotona_princeps
ENSLAFG00000006979	PRDM12	94	96.562	ENSODEG00000016282	PRDM12	63	96.765	Octodon_degus
ENSLAFG00000006979	PRDM12	56	93.810	ENSOANG00000001043	PRDM12	94	93.810	Ornithorhynchus_anatinus
ENSLAFG00000006979	PRDM12	86	91.850	ENSOCUG00000008241	PRDM12	98	92.926	Oryctolagus_cuniculus
ENSLAFG00000006979	PRDM12	95	77.358	ENSORLG00000007114	prdm12b	91	81.977	Oryzias_latipes
ENSLAFG00000006979	PRDM12	88	78.035	ENSORLG00000017558	-	87	78.613	Oryzias_latipes
ENSLAFG00000006979	PRDM12	89	80.229	ENSORLG00020019565	prdm12b	91	80.692	Oryzias_latipes_hni
ENSLAFG00000006979	PRDM12	88	78.098	ENSORLG00020013167	-	87	78.386	Oryzias_latipes_hni
ENSLAFG00000006979	PRDM12	89	79.943	ENSORLG00015007621	prdm12b	92	80.403	Oryzias_latipes_hsok
ENSLAFG00000006979	PRDM12	88	78.035	ENSORLG00015003435	-	87	78.613	Oryzias_latipes_hsok
ENSLAFG00000006979	PRDM12	92	75.204	ENSOMEG00000007762	-	94	76.966	Oryzias_melastigma
ENSLAFG00000006979	PRDM12	89	79.545	ENSOMEG00000004134	prdm12b	91	79.714	Oryzias_melastigma
ENSLAFG00000006979	PRDM12	91	98.230	ENSOGAG00000007557	PRDM12	100	98.230	Otolemur_garnettii
ENSLAFG00000006979	PRDM12	79	96.587	ENSPPAG00000031506	-	97	96.587	Pan_paniscus
ENSLAFG00000006979	PRDM12	94	89.744	ENSPPRG00000023024	PRDM12	86	90.029	Panthera_pardus
ENSLAFG00000006979	PRDM12	91	97.353	ENSPTRG00000043324	-	91	97.353	Pan_troglodytes
ENSLAFG00000006979	PRDM12	91	97.353	ENSPTRG00000021475	PRDM12	91	97.353	Pan_troglodytes
ENSLAFG00000006979	PRDM12	98	95.082	ENSPANG00000025967	PRDM12	99	95.082	Papio_anubis
ENSLAFG00000006979	PRDM12	93	78.736	ENSPKIG00000004305	PRDM12	94	80.967	Paramormyrops_kingsleyae
ENSLAFG00000006979	PRDM12	91	83.853	ENSPKIG00000007228	prdm12b	94	83.853	Paramormyrops_kingsleyae
ENSLAFG00000006979	PRDM12	93	91.066	ENSPSIG00000006739	PRDM12	94	91.176	Pelodiscus_sinensis
ENSLAFG00000006979	PRDM12	90	83.086	ENSPMGG00000008867	prdm12b	91	83.680	Periophthalmus_magnuspinnatus
ENSLAFG00000006979	PRDM12	90	78.655	ENSPMGG00000002356	-	88	78.655	Periophthalmus_magnuspinnatus
ENSLAFG00000006979	PRDM12	95	93.838	ENSPEMG00000009969	Prdm12	91	97.337	Peromyscus_maniculatus_bairdii
ENSLAFG00000006979	PRDM12	93	94.236	ENSPCIG00000024119	PRDM12	94	94.412	Phascolarctos_cinereus
ENSLAFG00000006979	PRDM12	92	80.571	ENSPFOG00000019841	prdm12b	93	81.341	Poecilia_formosa
ENSLAFG00000006979	PRDM12	90	83.631	ENSPLAG00000016626	prdm12b	90	83.186	Poecilia_latipinna
ENSLAFG00000006979	PRDM12	88	82.675	ENSPMEG00000016698	prdm12b	89	82.675	Poecilia_mexicana
ENSLAFG00000006979	PRDM12	90	83.631	ENSPREG00000015073	prdm12b	89	83.186	Poecilia_reticulata
ENSLAFG00000006979	PRDM12	90	74.783	ENSPREG00000003211	-	90	76.577	Poecilia_reticulata
ENSLAFG00000006979	PRDM12	94	95.739	ENSPPYG00000019694	PRDM12	99	95.739	Pongo_abelii
ENSLAFG00000006979	PRDM12	91	98.235	ENSPCOG00000022255	PRDM12	91	98.235	Propithecus_coquereli
ENSLAFG00000006979	PRDM12	91	97.941	ENSPVAG00000001511	PRDM12	91	97.941	Pteropus_vampyrus
ENSLAFG00000006979	PRDM12	88	79.827	ENSPNYG00000013589	-	86	79.827	Pundamilia_nyererei
ENSLAFG00000006979	PRDM12	92	77.839	ENSPNYG00000009607	prdm12b	93	80.980	Pundamilia_nyererei
ENSLAFG00000006979	PRDM12	90	87.316	ENSPNAG00000024532	prdm12b	91	87.353	Pygocentrus_nattereri
ENSLAFG00000006979	PRDM12	88	79.701	ENSPNAG00000013396	PRDM12	88	79.104	Pygocentrus_nattereri
ENSLAFG00000006979	PRDM12	91	97.059	ENSRNOG00000009218	Prdm12	92	97.059	Rattus_norvegicus
ENSLAFG00000006979	PRDM12	87	97.523	ENSRBIG00000042712	PRDM12	91	95.224	Rhinopithecus_bieti
ENSLAFG00000006979	PRDM12	88	97.554	ENSRROG00000043554	PRDM12	100	97.554	Rhinopithecus_roxellana
ENSLAFG00000006979	PRDM12	93	93.391	ENSSHAG00000015972	PRDM12	94	93.548	Sarcophilus_harrisii
ENSLAFG00000006979	PRDM12	90	78.652	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSLAFG00000006979	PRDM12	92	77.384	ENSSDUG00000023498	prdm12b	90	81.341	Seriola_dumerili
ENSLAFG00000006979	PRDM12	94	79.661	ENSSDUG00000019071	-	90	83.030	Seriola_dumerili
ENSLAFG00000006979	PRDM12	88	82.477	ENSSLDG00000013562	-	93	82.477	Seriola_lalandi_dorsalis
ENSLAFG00000006979	PRDM12	92	77.686	ENSSLDG00000009557	prdm12b	90	80.460	Seriola_lalandi_dorsalis
ENSLAFG00000006979	PRDM12	93	91.354	ENSSPUG00000013424	PRDM12	94	91.471	Sphenodon_punctatus
ENSLAFG00000006979	PRDM12	88	80.460	ENSSPAG00000018824	prdm12b	90	82.596	Stegastes_partitus
ENSLAFG00000006979	PRDM12	88	70.317	ENSSPAG00000022420	-	87	73.414	Stegastes_partitus
ENSLAFG00000006979	PRDM12	99	94.624	ENSSSCG00000005703	PRDM12	99	94.624	Sus_scrofa
ENSLAFG00000006979	PRDM12	88	79.882	ENSTRUG00000013239	-	93	80.178	Takifugu_rubripes
ENSLAFG00000006979	PRDM12	90	81.871	ENSTRUG00000018659	prdm12b	92	80.980	Takifugu_rubripes
ENSLAFG00000006979	PRDM12	92	76.045	ENSTNIG00000005859	-	92	79.464	Tetraodon_nigroviridis
ENSLAFG00000006979	PRDM12	90	82.507	ENSTNIG00000009020	prdm12b	91	81.792	Tetraodon_nigroviridis
ENSLAFG00000006979	PRDM12	94	97.443	ENSUAMG00000009653	PRDM12	96	97.443	Ursus_americanus
ENSLAFG00000006979	PRDM12	91	98.225	ENSVVUG00000027662	PRDM12	79	98.225	Vulpes_vulpes
ENSLAFG00000006979	PRDM12	90	83.333	ENSXCOG00000002836	prdm12b	91	82.891	Xiphophorus_couchianus
ENSLAFG00000006979	PRDM12	90	78.551	ENSXMAG00000028012	-	88	78.551	Xiphophorus_maculatus
ENSLAFG00000006979	PRDM12	90	81.657	ENSXMAG00000005537	prdm12b	91	81.232	Xiphophorus_maculatus