EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000007048 (Gene tree)
Gene ID: -
Gene Symbol: ZIC3
Alias: HTX|HTX1|ZNF203
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 3141 bases
Position: chrscaffold_89:3583586-3586726
Accession: 12874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005920	zf-C2H2	PF00096.26	7.9e-23	1	4
ENSLAFP00000005920	zf-C2H2	PF00096.26	7.9e-23	2	4
ENSLAFP00000005920	zf-C2H2	PF00096.26	7.9e-23	3	4
ENSLAFP00000005920	zf-C2H2	PF00096.26	7.9e-23	4	4
ENSLAFP00000019907	zf-C2H2	PF00096.26	8e-23	1	4
ENSLAFP00000019907	zf-C2H2	PF00096.26	8e-23	2	4
ENSLAFP00000019907	zf-C2H2	PF00096.26	8e-23	3	4
ENSLAFP00000019907	zf-C2H2	PF00096.26	8e-23	4	4
ENSLAFP00000005920	zf-met	PF12874.7	4.9e-05	1	1
ENSLAFP00000019907	zf-met	PF12874.7	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007045	ZIC3-202	1164	-	ENSLAFP00000005920	387 (aa)	-	G3SZD0
ENSLAFT00000030303	ZIC3-201	1236	-	ENSLAFP00000019907	411 (aa)	-	G3TWE9

Gene Model

Click here to download ENSLAFG00000007048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000007048	ZIC3	52	39.815	ENSLAFG00000006532	PRDM5	95	39.815
ENSLAFG00000007048	ZIC3	51	37.037	ENSLAFG00000031653	-	99	45.872
ENSLAFG00000007048	ZIC3	51	31.933	ENSLAFG00000032716	-	85	32.258

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007048	ZIC3	99	93.917	ENSG00000156925	ZIC3	88	93.917	Homo_sapiens
ENSLAFG00000007048	ZIC3	99	94.891	ENSANAG00000019614	ZIC3	88	94.891	Aotus_nancymaae
ENSLAFG00000007048	ZIC3	99	94.647	ENSCJAG00000013792	ZIC3	88	94.647	Callithrix_jacchus
ENSLAFG00000007048	ZIC3	99	95.134	ENSCAFG00000018979	ZIC3	88	95.134	Canis_familiaris
ENSLAFG00000007048	ZIC3	99	94.891	ENSTSYG00000003356	ZIC3	88	94.891	Carlito_syrichta
ENSLAFG00000007048	ZIC3	64	97.154	ENSCPOG00000002374	ZIC3	100	97.154	Cavia_porcellus
ENSLAFG00000007048	ZIC3	99	94.647	ENSCCAG00000025983	ZIC3	88	94.647	Cebus_capucinus
ENSLAFG00000007048	ZIC3	99	94.404	ENSCATG00000036569	ZIC3	88	94.404	Cercocebus_atys
ENSLAFG00000007048	ZIC3	100	93.216	ENSCLAG00000001934	ZIC3	88	94.161	Chinchilla_lanigera
ENSLAFG00000007048	ZIC3	99	85.714	ENSCPBG00000026115	ZIC3	96	85.714	Chrysemys_picta_bellii
ENSLAFG00000007048	ZIC3	99	94.161	ENSCANG00000017505	ZIC3	88	94.161	Colobus_angolensis_palliatus
ENSLAFG00000007048	ZIC3	99	93.917	ENSCGRG00001024527	Zic3	88	93.917	Cricetulus_griseus_chok1gshd
ENSLAFG00000007048	ZIC3	100	92.211	ENSDORG00000025481	Zic3	88	93.187	Dipodomys_ordii
ENSLAFG00000007048	ZIC3	99	95.134	ENSFCAG00000025684	ZIC3	88	95.134	Felis_catus
ENSLAFG00000007048	ZIC3	96	96.757	ENSFDAG00000014929	ZIC3	100	98.780	Fukomys_damarensis
ENSLAFG00000007048	ZIC3	95	77.608	ENSGAGG00000004149	ZIC3	82	77.608	Gopherus_agassizii
ENSLAFG00000007048	ZIC3	99	94.161	ENSGGOG00000011914	ZIC3	88	94.161	Gorilla_gorilla
ENSLAFG00000007048	ZIC3	99	93.674	ENSHGLG00000006298	ZIC3	88	93.674	Heterocephalus_glaber_female
ENSLAFG00000007048	ZIC3	81	67.197	ENSHGLG00100002829	ZIC3	100	76.115	Heterocephalus_glaber_male
ENSLAFG00000007048	ZIC3	100	92.965	ENSJJAG00000022714	Zic3	88	93.917	Jaculus_jaculus
ENSLAFG00000007048	ZIC3	99	80.513	ENSLACG00000014597	ZIC3	87	80.513	Latimeria_chalumnae
ENSLAFG00000007048	ZIC3	99	94.404	ENSMFAG00000027018	ZIC3	88	94.404	Macaca_fascicularis
ENSLAFG00000007048	ZIC3	86	93.484	ENSMMUG00000002023	ZIC3	77	93.750	Macaca_mulatta
ENSLAFG00000007048	ZIC3	99	94.404	ENSMNEG00000040682	ZIC3	88	94.404	Macaca_nemestrina
ENSLAFG00000007048	ZIC3	99	94.404	ENSMLEG00000004378	ZIC3	88	94.404	Mandrillus_leucophaeus
ENSLAFG00000007048	ZIC3	100	92.714	ENSMAUG00000009402	Zic3	88	93.674	Mesocricetus_auratus
ENSLAFG00000007048	ZIC3	99	94.647	ENSMICG00000042529	ZIC3	88	94.647	Microcebus_murinus
ENSLAFG00000007048	ZIC3	100	92.947	ENSMOCG00000020544	Zic3	88	93.431	Microtus_ochrogaster
ENSLAFG00000007048	ZIC3	100	92.462	MGP_CAROLIEiJ_G0033101	Zic3	100	97.967	Mus_caroli
ENSLAFG00000007048	ZIC3	100	92.462	ENSMUSG00000067860	Zic3	100	97.967	Mus_musculus
ENSLAFG00000007048	ZIC3	100	92.462	MGP_PahariEiJ_G0031644	Zic3	100	97.967	Mus_pahari
ENSLAFG00000007048	ZIC3	100	92.462	MGP_SPRETEiJ_G0034256	Zic3	100	97.967	Mus_spretus
ENSLAFG00000007048	ZIC3	99	93.431	ENSNGAG00000023346	Zic3	88	93.431	Nannospalax_galili
ENSLAFG00000007048	ZIC3	73	97.509	ENSNLEG00000003005	-	78	97.509	Nomascus_leucogenys
ENSLAFG00000007048	ZIC3	100	92.965	ENSODEG00000005556	ZIC3	88	93.917	Octodon_degus
ENSLAFG00000007048	ZIC3	99	94.161	ENSPPAG00000030013	ZIC3	88	94.161	Pan_paniscus
ENSLAFG00000007048	ZIC3	99	94.891	ENSPPRG00000010839	ZIC3	88	94.891	Panthera_pardus
ENSLAFG00000007048	ZIC3	99	94.161	ENSPTRG00000043849	ZIC3	88	94.161	Pan_troglodytes
ENSLAFG00000007048	ZIC3	99	94.404	ENSPANG00000011357	ZIC3	88	94.404	Papio_anubis
ENSLAFG00000007048	ZIC3	99	76.531	ENSPKIG00000017705	zic3	89	74.634	Paramormyrops_kingsleyae
ENSLAFG00000007048	ZIC3	75	89.384	ENSPSIG00000011896	ZIC3	99	89.384	Pelodiscus_sinensis
ENSLAFG00000007048	ZIC3	100	92.714	ENSPEMG00000022168	Zic3	88	93.674	Peromyscus_maniculatus_bairdii
ENSLAFG00000007048	ZIC3	99	94.404	ENSPCOG00000021557	ZIC3	88	94.404	Propithecus_coquereli
ENSLAFG00000007048	ZIC3	100	92.462	ENSRNOG00000000861	Zic3	88	93.431	Rattus_norvegicus
ENSLAFG00000007048	ZIC3	99	94.161	ENSRBIG00000030660	ZIC3	88	94.161	Rhinopithecus_bieti
ENSLAFG00000007048	ZIC3	99	94.161	ENSRROG00000028410	ZIC3	88	94.161	Rhinopithecus_roxellana
ENSLAFG00000007048	ZIC3	99	94.647	ENSSBOG00000024684	ZIC3	88	94.647	Saimiri_boliviensis_boliviensis
ENSLAFG00000007048	ZIC3	87	81.121	ENSSFOG00015008079	zic3	85	81.121	Scleropages_formosus
ENSLAFG00000007048	ZIC3	100	75.888	ENSSFOG00015011731	zic3	89	74.029	Scleropages_formosus
ENSLAFG00000007048	ZIC3	98	81.122	ENSTGUG00000002155	ZIC3	100	82.323	Taeniopygia_guttata
ENSLAFG00000007048	ZIC3	99	95.134	ENSVVUG00000021378	ZIC3	88	95.134	Vulpes_vulpes
ENSLAFG00000007048	ZIC3	99	78.149	ENSXETG00000024458	zic3	89	75.303	Xenopus_tropicalis