EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000007049 (Gene tree)
Gene ID: -
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 43539 bases
Position: chrscaffold_10:23937601-23981139
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000005926	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007052	HELLS-201	2469	-	ENSLAFP00000005926	822 (aa)	-	G5E6T6

Gene Model

Click here to download ENSLAFG00000007049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000007049	HELLS	56	50.259	ENSLAFG00000023183	CHD1	50	42.199
ENSLAFG00000007049	HELLS	63	48.718	ENSLAFG00000016885	-	60	48.718
ENSLAFG00000007049	HELLS	66	47.809	ENSLAFG00000000896	SMARCA1	53	47.809
ENSLAFG00000007049	HELLS	67	40.179	ENSLAFG00000018136	CHD1L	56	40.142

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007049	HELLS	100	95.255	ENSG00000119969	HELLS	100	95.798	Homo_sapiens
ENSLAFG00000007049	HELLS	93	67.750	ENSAPOG00000007707	hells	99	63.682	Acanthochromis_polyacanthus
ENSLAFG00000007049	HELLS	100	94.654	ENSAMEG00000013525	HELLS	98	94.897	Ailuropoda_melanoleuca
ENSLAFG00000007049	HELLS	83	67.789	ENSACIG00000018996	hells	99	66.525	Amphilophus_citrinellus
ENSLAFG00000007049	HELLS	96	65.443	ENSAOCG00000006348	hells	96	65.483	Amphiprion_ocellaris
ENSLAFG00000007049	HELLS	96	65.063	ENSAPEG00000001422	hells	96	64.994	Amphiprion_percula
ENSLAFG00000007049	HELLS	98	65.640	ENSATEG00000008107	hells	99	63.681	Anabas_testudineus
ENSLAFG00000007049	HELLS	95	82.420	ENSAPLG00000002649	HELLS	99	81.911	Anas_platyrhynchos
ENSLAFG00000007049	HELLS	87	74.861	ENSACAG00000028785	HELLS	96	74.861	Anolis_carolinensis
ENSLAFG00000007049	HELLS	100	93.431	ENSANAG00000034765	-	100	93.000	Aotus_nancymaae
ENSLAFG00000007049	HELLS	98	63.704	ENSACLG00000007613	hells	99	63.457	Astatotilapia_calliptera
ENSLAFG00000007049	HELLS	84	67.391	ENSAMXG00000002088	hells	99	67.286	Astyanax_mexicanus
ENSLAFG00000007049	HELLS	82	93.890	ENSBTAG00000005979	HELLS	100	93.890	Bos_taurus
ENSLAFG00000007049	HELLS	100	93.431	ENSCJAG00000015819	HELLS	100	93.143	Callithrix_jacchus
ENSLAFG00000007049	HELLS	99	94.647	ENSCAFG00000008090	HELLS	98	94.647	Canis_familiaris
ENSLAFG00000007049	HELLS	96	95.044	ENSCAFG00020004809	HELLS	98	95.299	Canis_lupus_dingo
ENSLAFG00000007049	HELLS	100	90.998	ENSCHIG00000019462	HELLS	98	90.998	Capra_hircus
ENSLAFG00000007049	HELLS	100	91.971	ENSTSYG00000005811	-	99	91.971	Carlito_syrichta
ENSLAFG00000007049	HELLS	100	92.579	ENSCPOG00000003043	HELLS	98	92.579	Cavia_porcellus
ENSLAFG00000007049	HELLS	56	92.388	ENSCCAG00000026761	HELLS	97	92.388	Cebus_capucinus
ENSLAFG00000007049	HELLS	100	89.977	ENSCATG00000033830	HELLS	100	95.518	Cercocebus_atys
ENSLAFG00000007049	HELLS	100	92.579	ENSCLAG00000003938	HELLS	100	92.579	Chinchilla_lanigera
ENSLAFG00000007049	HELLS	87	95.518	ENSCSAG00000006181	HELLS	100	95.518	Chlorocebus_sabaeus
ENSLAFG00000007049	HELLS	87	82.542	ENSCPBG00000025739	HELLS	99	84.343	Chrysemys_picta_bellii
ENSLAFG00000007049	HELLS	100	89.747	ENSCANG00000037736	HELLS	100	95.238	Colobus_angolensis_palliatus
ENSLAFG00000007049	HELLS	100	91.363	ENSCGRG00001017410	Hells	100	90.024	Cricetulus_griseus_chok1gshd
ENSLAFG00000007049	HELLS	95	65.045	ENSCSEG00000016985	hells	99	65.045	Cynoglossus_semilaevis
ENSLAFG00000007049	HELLS	64	62.998	ENSCVAG00000000159	hells	97	62.921	Cyprinodon_variegatus
ENSLAFG00000007049	HELLS	95	66.455	ENSDARG00000057738	hells	95	66.340	Danio_rerio
ENSLAFG00000007049	HELLS	77	95.261	ENSDNOG00000017758	HELLS	100	95.261	Dasypus_novemcinctus
ENSLAFG00000007049	HELLS	100	90.389	ENSDORG00000011812	Hells	98	90.389	Dipodomys_ordii
ENSLAFG00000007049	HELLS	75	53.712	ENSEBUG00000016152	hells	93	53.712	Eptatretus_burgeri
ENSLAFG00000007049	HELLS	100	94.775	ENSEASG00005011764	HELLS	100	93.674	Equus_asinus_asinus
ENSLAFG00000007049	HELLS	100	94.647	ENSECAG00000018810	HELLS	98	94.647	Equus_caballus
ENSLAFG00000007049	HELLS	81	93.478	ENSEEUG00000007680	HELLS	90	93.478	Erinaceus_europaeus
ENSLAFG00000007049	HELLS	96	65.239	ENSELUG00000014909	hells	93	64.409	Esox_lucius
ENSLAFG00000007049	HELLS	87	95.378	ENSFCAG00000005206	HELLS	100	95.378	Felis_catus
ENSLAFG00000007049	HELLS	99	82.238	ENSFALG00000007136	HELLS	99	81.630	Ficedula_albicollis
ENSLAFG00000007049	HELLS	100	91.606	ENSFDAG00000010042	HELLS	100	92.092	Fukomys_damarensis
ENSLAFG00000007049	HELLS	99	64.049	ENSFHEG00000022950	hells	97	63.904	Fundulus_heteroclitus
ENSLAFG00000007049	HELLS	99	78.266	ENSGALG00000005451	HELLS	100	83.119	Gallus_gallus
ENSLAFG00000007049	HELLS	98	64.207	ENSGAFG00000001204	hells	94	64.084	Gambusia_affinis
ENSLAFG00000007049	HELLS	95	64.923	ENSGACG00000003897	hells	91	64.923	Gasterosteus_aculeatus
ENSLAFG00000007049	HELLS	87	82.238	ENSGAGG00000010269	HELLS	100	83.954	Gopherus_agassizii
ENSLAFG00000007049	HELLS	100	90.146	ENSGGOG00000008103	HELLS	100	95.378	Gorilla_gorilla
ENSLAFG00000007049	HELLS	98	65.148	ENSHBUG00000010270	hells	99	63.457	Haplochromis_burtoni
ENSLAFG00000007049	HELLS	100	92.579	ENSHGLG00000011377	-	100	92.579	Heterocephalus_glaber_female
ENSLAFG00000007049	HELLS	74	91.104	ENSHGLG00000006537	-	100	91.104	Heterocephalus_glaber_female
ENSLAFG00000007049	HELLS	100	92.336	ENSHGLG00100017230	-	100	92.336	Heterocephalus_glaber_male
ENSLAFG00000007049	HELLS	90	82.210	ENSHGLG00100001957	-	95	82.030	Heterocephalus_glaber_male
ENSLAFG00000007049	HELLS	86	65.303	ENSHCOG00000001119	hells	96	65.303	Hippocampus_comes
ENSLAFG00000007049	HELLS	99	64.921	ENSIPUG00000002634	HELLS	95	64.799	Ictalurus_punctatus
ENSLAFG00000007049	HELLS	100	93.187	ENSSTOG00000021976	HELLS	100	93.187	Ictidomys_tridecemlineatus
ENSLAFG00000007049	HELLS	99	86.012	ENSJJAG00000000865	Hells	99	85.521	Jaculus_jaculus
ENSLAFG00000007049	HELLS	99	65.644	ENSKMAG00000017279	hells	94	66.012	Kryptolebias_marmoratus
ENSLAFG00000007049	HELLS	98	65.887	ENSLBEG00000027807	hells	94	65.887	Labrus_bergylta
ENSLAFG00000007049	HELLS	100	95.012	ENSMFAG00000044053	HELLS	99	95.245	Macaca_fascicularis
ENSLAFG00000007049	HELLS	100	86.982	ENSMMUG00000017255	HELLS	100	95.382	Macaca_mulatta
ENSLAFG00000007049	HELLS	100	89.977	ENSMNEG00000042628	HELLS	100	95.518	Macaca_nemestrina
ENSLAFG00000007049	HELLS	100	95.012	ENSMLEG00000041751	HELLS	99	95.245	Mandrillus_leucophaeus
ENSLAFG00000007049	HELLS	95	64.331	ENSMAMG00000009850	hells	98	66.715	Mastacembelus_armatus
ENSLAFG00000007049	HELLS	98	65.148	ENSMZEG00005018414	hells	99	63.457	Maylandia_zebra
ENSLAFG00000007049	HELLS	97	80.497	ENSMGAG00000006818	HELLS	97	83.710	Meleagris_gallopavo
ENSLAFG00000007049	HELLS	98	89.277	ENSMAUG00000021941	Hells	97	89.599	Mesocricetus_auratus
ENSLAFG00000007049	HELLS	70	92.334	ENSMICG00000046554	-	95	92.334	Microcebus_murinus
ENSLAFG00000007049	HELLS	100	89.903	ENSMOCG00000019342	Hells	100	89.781	Microtus_ochrogaster
ENSLAFG00000007049	HELLS	99	60.073	ENSMMOG00000007950	hells	97	60.317	Mola_mola
ENSLAFG00000007049	HELLS	98	84.826	ENSMODG00000005589	-	51	85.232	Monodelphis_domestica
ENSLAFG00000007049	HELLS	98	61.728	ENSMALG00000010244	hells	94	61.605	Monopterus_albus
ENSLAFG00000007049	HELLS	100	91.119	MGP_CAROLIEiJ_G0022930	Hells	100	91.119	Mus_caroli
ENSLAFG00000007049	HELLS	100	90.876	ENSMUSG00000025001	Hells	100	90.876	Mus_musculus
ENSLAFG00000007049	HELLS	100	91.727	MGP_PahariEiJ_G0014423	Hells	100	91.727	Mus_pahari
ENSLAFG00000007049	HELLS	100	91.363	MGP_SPRETEiJ_G0023848	Hells	100	91.363	Mus_spretus
ENSLAFG00000007049	HELLS	100	94.769	ENSMPUG00000017131	HELLS	98	94.769	Mustela_putorius_furo
ENSLAFG00000007049	HELLS	99	91.819	ENSMLUG00000030511	HELLS	98	91.819	Myotis_lucifugus
ENSLAFG00000007049	HELLS	100	90.754	ENSNGAG00000014049	Hells	98	90.754	Nannospalax_galili
ENSLAFG00000007049	HELLS	98	60.494	ENSNBRG00000024242	hells	99	60.370	Neolamprologus_brichardi
ENSLAFG00000007049	HELLS	100	89.747	ENSNLEG00000012987	HELLS	100	95.378	Nomascus_leucogenys
ENSLAFG00000007049	HELLS	100	89.294	ENSODEG00000015916	HELLS	98	89.294	Octodon_degus
ENSLAFG00000007049	HELLS	99	64.663	ENSONIG00000013166	hells	94	65.031	Oreochromis_niloticus
ENSLAFG00000007049	HELLS	100	85.298	ENSOANG00000005139	HELLS	99	85.298	Ornithorhynchus_anatinus
ENSLAFG00000007049	HELLS	100	93.552	ENSOCUG00000026731	HELLS	98	93.552	Oryctolagus_cuniculus
ENSLAFG00000007049	HELLS	98	64.084	ENSORLG00000000987	hells	96	63.827	Oryzias_latipes
ENSLAFG00000007049	HELLS	98	64.207	ENSORLG00020003952	hells	96	63.457	Oryzias_latipes_hni
ENSLAFG00000007049	HELLS	98	64.084	ENSORLG00015010960	hells	96	63.210	Oryzias_latipes_hsok
ENSLAFG00000007049	HELLS	99	63.814	ENSOMEG00000000135	hells	94	64.548	Oryzias_melastigma
ENSLAFG00000007049	HELLS	100	92.944	ENSOGAG00000017145	HELLS	99	92.944	Otolemur_garnettii
ENSLAFG00000007049	HELLS	100	93.796	ENSOARG00000004495	HELLS	98	93.796	Ovis_aries
ENSLAFG00000007049	HELLS	100	90.389	ENSPPAG00000001726	HELLS	100	95.658	Pan_paniscus
ENSLAFG00000007049	HELLS	87	94.958	ENSPPRG00000005839	HELLS	100	95.238	Panthera_pardus
ENSLAFG00000007049	HELLS	99	94.641	ENSPTIG00000007647	HELLS	100	95.238	Panthera_tigris_altaica
ENSLAFG00000007049	HELLS	100	90.389	ENSPTRG00000002778	HELLS	99	94.850	Pan_troglodytes
ENSLAFG00000007049	HELLS	100	89.977	ENSPANG00000033528	HELLS	100	95.518	Papio_anubis
ENSLAFG00000007049	HELLS	99	64.103	ENSPKIG00000010890	hells	98	62.945	Paramormyrops_kingsleyae
ENSLAFG00000007049	HELLS	96	81.715	ENSPSIG00000005462	HELLS	100	81.841	Pelodiscus_sinensis
ENSLAFG00000007049	HELLS	98	60.741	ENSPMGG00000014690	hells	98	66.424	Periophthalmus_magnuspinnatus
ENSLAFG00000007049	HELLS	100	84.063	ENSPEMG00000017579	Hells	100	84.063	Peromyscus_maniculatus_bairdii
ENSLAFG00000007049	HELLS	97	61.567	ENSPMAG00000004376	hells	96	61.567	Petromyzon_marinus
ENSLAFG00000007049	HELLS	99	85.455	ENSPCIG00000013361	HELLS	98	85.455	Phascolarctos_cinereus
ENSLAFG00000007049	HELLS	99	63.280	ENSPFOG00000001954	hells	94	63.770	Poecilia_formosa
ENSLAFG00000007049	HELLS	99	63.158	ENSPLAG00000006504	hells	97	63.624	Poecilia_latipinna
ENSLAFG00000007049	HELLS	99	63.280	ENSPMEG00000003024	hells	97	63.764	Poecilia_mexicana
ENSLAFG00000007049	HELLS	99	63.035	ENSPREG00000020337	hells	94	63.525	Poecilia_reticulata
ENSLAFG00000007049	HELLS	100	89.862	ENSPPYG00000002502	HELLS	98	89.862	Pongo_abelii
ENSLAFG00000007049	HELLS	100	89.903	ENSPCAG00000013618	HELLS	98	89.903	Procavia_capensis
ENSLAFG00000007049	HELLS	100	90.734	ENSPCOG00000023985	HELLS	99	94.380	Propithecus_coquereli
ENSLAFG00000007049	HELLS	92	92.818	ENSPVAG00000017899	HELLS	90	92.818	Pteropus_vampyrus
ENSLAFG00000007049	HELLS	98	62.917	ENSPNYG00000009100	hells	99	62.917	Pundamilia_nyererei
ENSLAFG00000007049	HELLS	96	64.810	ENSPNAG00000029968	hells	96	64.385	Pygocentrus_nattereri
ENSLAFG00000007049	HELLS	100	91.606	ENSRNOG00000047692	LOC100911660	100	91.606	Rattus_norvegicus
ENSLAFG00000007049	HELLS	100	91.606	ENSRNOG00000047104	Hells	98	91.606	Rattus_norvegicus
ENSLAFG00000007049	HELLS	100	88.542	ENSRBIG00000041080	HELLS	100	93.651	Rhinopithecus_bieti
ENSLAFG00000007049	HELLS	100	90.210	ENSRROG00000040169	HELLS	100	95.238	Rhinopithecus_roxellana
ENSLAFG00000007049	HELLS	99	85.818	ENSSHAG00000014358	HELLS	100	85.818	Sarcophilus_harrisii
ENSLAFG00000007049	HELLS	96	66.917	ENSSFOG00015017895	hells	98	66.340	Scleropages_formosus
ENSLAFG00000007049	HELLS	99	64.785	ENSSMAG00000017423	hells	99	63.100	Scophthalmus_maximus
ENSLAFG00000007049	HELLS	98	65.517	ENSSDUG00000016924	hells	99	63.490	Seriola_dumerili
ENSLAFG00000007049	HELLS	98	63.132	ENSSLDG00000018960	hells	94	63.009	Seriola_lalandi_dorsalis
ENSLAFG00000007049	HELLS	100	78.615	ENSSPUG00000017425	HELLS	100	81.211	Sphenodon_punctatus
ENSLAFG00000007049	HELLS	96	66.667	ENSSPAG00000015579	hells	99	66.230	Stegastes_partitus
ENSLAFG00000007049	HELLS	100	94.526	ENSSSCG00000010486	HELLS	98	94.526	Sus_scrofa
ENSLAFG00000007049	HELLS	100	81.939	ENSTGUG00000007157	HELLS	99	81.455	Taeniopygia_guttata
ENSLAFG00000007049	HELLS	95	66.412	ENSTRUG00000000350	hells	94	65.640	Takifugu_rubripes
ENSLAFG00000007049	HELLS	98	56.083	ENSTNIG00000003738	hells	98	56.629	Tetraodon_nigroviridis
ENSLAFG00000007049	HELLS	100	94.039	ENSUAMG00000003343	HELLS	100	94.039	Ursus_americanus
ENSLAFG00000007049	HELLS	100	94.647	ENSUMAG00000004748	HELLS	99	94.913	Ursus_maritimus
ENSLAFG00000007049	HELLS	100	92.701	ENSVPAG00000010115	HELLS	98	92.944	Vicugna_pacos
ENSLAFG00000007049	HELLS	99	94.884	ENSVVUG00000022808	HELLS	98	95.128	Vulpes_vulpes
ENSLAFG00000007049	HELLS	99	62.116	ENSXCOG00000013840	hells	97	62.239	Xiphophorus_couchianus
ENSLAFG00000007049	HELLS	99	63.158	ENSXMAG00000005731	hells	97	64.698	Xiphophorus_maculatus