EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSLAFG00000007150 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Loxodonta_africana
Status
putative
Strand
Minus strand
Length
31571 bases
Position
chrscaffold_11:60584476-60616046
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLAFP00000006015CSDPF00313.227.2e-8315
ENSLAFP00000006015CSDPF00313.227.2e-8325
ENSLAFP00000006015CSDPF00313.227.2e-8335
ENSLAFP00000006015CSDPF00313.227.2e-8345
ENSLAFP00000006015CSDPF00313.227.2e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLAFT00000007150CSDE1-2012397-ENSLAFP00000006015799 (aa)-G3SZH0
Gene Model
Click here to download ENSLAFG00000007150's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007150's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLAFG00000007150CSDE19697.784ENSG00000009307CSDE1100100.000Homo_sapiens
ENSLAFG00000007150CSDE19677.143ENSAPOG00000015538csde110077.143Acanthochromis_polyacanthus
ENSLAFG00000007150CSDE19696.498ENSAMEG00000017129CSDE19596.498Ailuropoda_melanoleuca
ENSLAFG00000007150CSDE18676.757ENSACIG00000015175csde110076.757Amphilophus_citrinellus
ENSLAFG00000007150CSDE19677.273ENSAOCG00000011510csde110077.273Amphiprion_ocellaris
ENSLAFG00000007150CSDE19677.273ENSAPEG00000007194csde110077.273Amphiprion_percula
ENSLAFG00000007150CSDE19676.883ENSATEG00000003864csde110076.883Anabas_testudineus
ENSLAFG00000007150CSDE19691.786ENSAPLG00000008797CSDE110091.786Anas_platyrhynchos
ENSLAFG00000007150CSDE19687.218ENSACAG00000003120CSDE110087.218Anolis_carolinensis
ENSLAFG00000007150CSDE19897.452ENSANAG00000024665CSDE19897.452Aotus_nancymaae
ENSLAFG00000007150CSDE18972.695ENSANAG00000028396-9072.695Aotus_nancymaae
ENSLAFG00000007150CSDE19677.243ENSACLG00000013296csde110077.243Astatotilapia_calliptera
ENSLAFG00000007150CSDE19676.783ENSAMXG00000007436csde110076.783Astyanax_mexicanus
ENSLAFG00000007150CSDE19697.132ENSBTAG00000000678CSDE110097.132Bos_taurus
ENSLAFG00000007150CSDE19697.147ENSCJAG00000012565CSDE19597.147Callithrix_jacchus
ENSLAFG00000007150CSDE19597.487ENSCAFG00000009618CSDE19597.487Canis_familiaris
ENSLAFG00000007150CSDE19697.914ENSCAFG00020000481CSDE110097.914Canis_lupus_dingo
ENSLAFG00000007150CSDE19697.132ENSCHIG00000017250CSDE110097.132Capra_hircus
ENSLAFG00000007150CSDE19697.132ENSTSYG00000003747CSDE110097.132Carlito_syrichta
ENSLAFG00000007150CSDE19667.337ENSCAPG00000015128CSDE110067.337Cavia_aperea
ENSLAFG00000007150CSDE19691.001ENSCPOG00000040388CSDE110091.001Cavia_porcellus
ENSLAFG00000007150CSDE19175.248ENSCCAG00000033677-9974.822Cebus_capucinus
ENSLAFG00000007150CSDE19372.383ENSCCAG00000030878-9172.383Cebus_capucinus
ENSLAFG00000007150CSDE19697.147ENSCCAG00000036794CSDE110096.437Cebus_capucinus
ENSLAFG00000007150CSDE19897.577ENSCATG00000036962CSDE19997.577Cercocebus_atys
ENSLAFG00000007150CSDE19697.132ENSCLAG00000006618CSDE110097.132Chinchilla_lanigera
ENSLAFG00000007150CSDE19693.641ENSCSAG00000001658CSDE19593.641Chlorocebus_sabaeus
ENSLAFG00000007150CSDE19690.343ENSCHOG00000000918CSDE18990.343Choloepus_hoffmanni
ENSLAFG00000007150CSDE19691.656ENSCPBG00000016547CSDE110091.656Chrysemys_picta_bellii
ENSLAFG00000007150CSDE19341.328ENSCING00000014465-9641.328Ciona_intestinalis
ENSLAFG00000007150CSDE19241.699ENSCSAVG00000008100-9841.699Ciona_savignyi
ENSLAFG00000007150CSDE19897.577ENSCANG00000035096CSDE19997.577Colobus_angolensis_palliatus
ENSLAFG00000007150CSDE19591.956ENSCANG00000031069-10091.956Colobus_angolensis_palliatus
ENSLAFG00000007150CSDE19680.052ENSCGRG00001014011-10080.052Cricetulus_griseus_chok1gshd
ENSLAFG00000007150CSDE19697.001ENSCGRG00001016833-10097.001Cricetulus_griseus_chok1gshd
ENSLAFG00000007150CSDE19395.991ENSCGRG00000002225-10095.991Cricetulus_griseus_crigri
ENSLAFG00000007150CSDE19684.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSLAFG00000007150CSDE19676.723ENSCSEG00000002620csde110076.723Cynoglossus_semilaevis
ENSLAFG00000007150CSDE19676.494ENSCVAG00000001344csde110076.494Cyprinodon_variegatus
ENSLAFG00000007150CSDE19675.094ENSDARG00000074758csde110075.094Danio_rerio
ENSLAFG00000007150CSDE17475.217ENSDNOG00000034464-10075.217Dasypus_novemcinctus
ENSLAFG00000007150CSDE110097.129ENSDNOG00000010287-9797.129Dasypus_novemcinctus
ENSLAFG00000007150CSDE19596.707ENSDORG00000011609Csde110096.707Dipodomys_ordii
ENSLAFG00000007150CSDE19348.847FBgn0263352Unr7747.590Drosophila_melanogaster
ENSLAFG00000007150CSDE19675.718ENSETEG00000013678-9975.718Echinops_telfairi
ENSLAFG00000007150CSDE18686.076ENSETEG00000006280-10086.076Echinops_telfairi
ENSLAFG00000007150CSDE17667.384ENSETEG00000007109-9967.384Echinops_telfairi
ENSLAFG00000007150CSDE19098.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSLAFG00000007150CSDE19554.187ENSEBUG00000008647csde19952.506Eptatretus_burgeri
ENSLAFG00000007150CSDE19697.147ENSEASG00005006284CSDE110093.734Equus_asinus_asinus
ENSLAFG00000007150CSDE19697.147ENSECAG00000020885CSDE19997.331Equus_caballus
ENSLAFG00000007150CSDE18998.429ENSEEUG00000006286CSDE17098.429Erinaceus_europaeus
ENSLAFG00000007150CSDE19675.420ENSELUG00000015507csde110075.420Esox_lucius
ENSLAFG00000007150CSDE19697.784ENSFCAG00000029266CSDE110097.784Felis_catus
ENSLAFG00000007150CSDE19687.594ENSFALG00000003407CSDE110087.594Ficedula_albicollis
ENSLAFG00000007150CSDE19597.156ENSFDAG00000007882CSDE110097.156Fukomys_damarensis
ENSLAFG00000007150CSDE19476.923ENSFHEG00000010799csde19976.923Fundulus_heteroclitus
ENSLAFG00000007150CSDE19673.902ENSGMOG00000012731csde110073.902Gadus_morhua
ENSLAFG00000007150CSDE19487.980ENSGALG00000002139CSDE19887.980Gallus_gallus
ENSLAFG00000007150CSDE18975.915ENSGAFG00000005241csde19575.915Gambusia_affinis
ENSLAFG00000007150CSDE19674.561ENSGACG00000004544csde110074.561Gasterosteus_aculeatus
ENSLAFG00000007150CSDE19690.921ENSGAGG00000017685CSDE110087.719Gopherus_agassizii
ENSLAFG00000007150CSDE19697.784ENSGGOG00000002164CSDE110097.784Gorilla_gorilla
ENSLAFG00000007150CSDE19677.243ENSHBUG00000020315csde110077.243Haplochromis_burtoni
ENSLAFG00000007150CSDE19584.231ENSHGLG00000007471-9884.231Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19675.659ENSHGLG00000000650-9975.659Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19287.528ENSHGLG00000010039-10087.528Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19587.575ENSHGLG00000008555-10087.575Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19679.545ENSHGLG00000019549-10079.545Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19688.396ENSHGLG00000003829-10088.396Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19687.484ENSHGLG00000009620-10087.744Heterocephalus_glaber_female
ENSLAFG00000007150CSDE19679.557ENSHGLG00100001846-10079.557Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19683.703ENSHGLG00100012072-10083.703Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19082.566ENSHGLG00100004195-10082.566Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19697.523ENSHGLG00100019438-10097.523Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19581.735ENSHGLG00100007287-9881.735Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19379.733ENSHGLG00100004833-10079.733Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19287.305ENSHGLG00100006910-10087.305Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19679.975ENSHGLG00100002245-9979.975Heterocephalus_glaber_male
ENSLAFG00000007150CSDE19676.073ENSHCOG00000004158csde110076.073Hippocampus_comes
ENSLAFG00000007150CSDE19676.265ENSIPUG00000000355csde110076.265Ictalurus_punctatus
ENSLAFG00000007150CSDE19679.284ENSSTOG00000030994-10079.284Ictidomys_tridecemlineatus
ENSLAFG00000007150CSDE18880.860ENSSTOG00000032722-9880.860Ictidomys_tridecemlineatus
ENSLAFG00000007150CSDE19597.006ENSJJAG00000019571Csde110097.006Jaculus_jaculus
ENSLAFG00000007150CSDE19673.730ENSKMAG00000005685csde110073.606Kryptolebias_marmoratus
ENSLAFG00000007150CSDE19677.403ENSLBEG00000014770csde110077.403Labrus_bergylta
ENSLAFG00000007150CSDE19675.525ENSLACG00000018452CSDE19475.525Latimeria_chalumnae
ENSLAFG00000007150CSDE19677.029ENSLOCG00000010413csde19577.029Lepisosteus_oculatus
ENSLAFG00000007150CSDE19897.577ENSMFAG00000003674CSDE110097.784Macaca_fascicularis
ENSLAFG00000007150CSDE19897.577ENSMMUG00000001974CSDE110097.784Macaca_mulatta
ENSLAFG00000007150CSDE19897.577ENSMNEG00000045247CSDE19997.577Macaca_nemestrina
ENSLAFG00000007150CSDE19697.147ENSMLEG00000038673CSDE19597.147Mandrillus_leucophaeus
ENSLAFG00000007150CSDE19678.052ENSMAMG00000008821csde110078.052Mastacembelus_armatus
ENSLAFG00000007150CSDE19677.243ENSMZEG00005021675csde110077.243Maylandia_zebra
ENSLAFG00000007150CSDE19691.536ENSMGAG00000016381CSDE110091.536Meleagris_gallopavo
ENSLAFG00000007150CSDE19596.856ENSMAUG00000014031Csde110096.856Mesocricetus_auratus
ENSLAFG00000007150CSDE19895.775ENSMICG00000002050CSDE19996.429Microcebus_murinus
ENSLAFG00000007150CSDE19697.001ENSMOCG00000018960Csde110097.001Microtus_ochrogaster
ENSLAFG00000007150CSDE19677.143ENSMMOG00000015075csde110077.143Mola_mola
ENSLAFG00000007150CSDE19993.985ENSMODG00000004685CSDE110091.103Monodelphis_domestica
ENSLAFG00000007150CSDE19677.403ENSMALG00000007132csde110077.403Monopterus_albus
ENSLAFG00000007150CSDE19696.741MGP_CAROLIEiJ_G0025444Csde110097.351Mus_caroli
ENSLAFG00000007150CSDE19697.132ENSMUSG00000068823Csde110097.351Mus_musculus
ENSLAFG00000007150CSDE19697.132MGP_PahariEiJ_G0026888Csde110097.351Mus_pahari
ENSLAFG00000007150CSDE19697.132MGP_SPRETEiJ_G0026394Csde110097.351Mus_spretus
ENSLAFG00000007150CSDE19493.870ENSMPUG00000005753CSDE19993.870Mustela_putorius_furo
ENSLAFG00000007150CSDE19696.498ENSMLUG00000005681CSDE19596.498Myotis_lucifugus
ENSLAFG00000007150CSDE19596.856ENSNGAG00000021929Csde110096.856Nannospalax_galili
ENSLAFG00000007150CSDE19368.820ENSNGAG00000012599-10068.820Nannospalax_galili
ENSLAFG00000007150CSDE19677.243ENSNBRG00000020808csde110077.243Neolamprologus_brichardi
ENSLAFG00000007150CSDE19897.449ENSNLEG00000004842CSDE19997.449Nomascus_leucogenys
ENSLAFG00000007150CSDE19490.691ENSMEUG00000002677CSDE110090.691Notamacropus_eugenii
ENSLAFG00000007150CSDE19592.460ENSOPRG00000005002CSDE18392.460Ochotona_princeps
ENSLAFG00000007150CSDE19596.856ENSODEG00000007383-10096.856Octodon_degus
ENSLAFG00000007150CSDE19365.929ENSODEG00000005979-9865.929Octodon_degus
ENSLAFG00000007150CSDE19672.705ENSONIG00000009309csde110072.705Oreochromis_niloticus
ENSLAFG00000007150CSDE19674.938ENSOANG00000003346-10074.938Ornithorhynchus_anatinus
ENSLAFG00000007150CSDE110097.121ENSOCUG00000016438CSDE19897.121Oryctolagus_cuniculus
ENSLAFG00000007150CSDE19677.373ENSORLG00000000707csde110077.373Oryzias_latipes
ENSLAFG00000007150CSDE19674.314ENSORLG00020005148csde110072.827Oryzias_latipes_hni
ENSLAFG00000007150CSDE19677.373ENSORLG00015019415csde110077.373Oryzias_latipes_hsok
ENSLAFG00000007150CSDE19677.922ENSOMEG00000015656csde110077.922Oryzias_melastigma
ENSLAFG00000007150CSDE19697.406ENSOGAG00000012127CSDE19597.406Otolemur_garnettii
ENSLAFG00000007150CSDE19696.887ENSOARG00000020034CSDE19596.887Ovis_aries
ENSLAFG00000007150CSDE19697.784ENSPPAG00000025861CSDE110097.784Pan_paniscus
ENSLAFG00000007150CSDE19697.406ENSPPRG00000006747CSDE19597.406Panthera_pardus
ENSLAFG00000007150CSDE19697.406ENSPTIG00000015468CSDE110093.985Panthera_tigris_altaica
ENSLAFG00000007150CSDE19697.784ENSPTRG00000033721CSDE19797.784Pan_troglodytes
ENSLAFG00000007150CSDE19697.784ENSPANG00000018873CSDE110097.784Papio_anubis
ENSLAFG00000007150CSDE19676.593ENSPKIG00000009459csde110076.593Paramormyrops_kingsleyae
ENSLAFG00000007150CSDE19288.496ENSPSIG00000003823CSDE19688.496Pelodiscus_sinensis
ENSLAFG00000007150CSDE19676.753ENSPMGG00000000772csde110076.753Periophthalmus_magnuspinnatus
ENSLAFG00000007150CSDE19596.856ENSPEMG00000020357-10096.856Peromyscus_maniculatus_bairdii
ENSLAFG00000007150CSDE19691.228ENSPCIG00000022587CSDE110091.228Phascolarctos_cinereus
ENSLAFG00000007150CSDE19575.000ENSPFOG00000012664csde110075.466Poecilia_formosa
ENSLAFG00000007150CSDE19370.968ENSPLAG00000017680csde19370.968Poecilia_latipinna
ENSLAFG00000007150CSDE19471.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSLAFG00000007150CSDE19673.201ENSPREG00000011631csde110071.325Poecilia_reticulata
ENSLAFG00000007150CSDE19693.860ENSPPYG00000000996CSDE110093.860Pongo_abelii
ENSLAFG00000007150CSDE19692.477ENSPCAG00000014368CSDE19592.477Procavia_capensis
ENSLAFG00000007150CSDE19697.653ENSPCOG00000017893CSDE110097.653Propithecus_coquereli
ENSLAFG00000007150CSDE18682.117ENSPCOG00000008223-9282.117Propithecus_coquereli
ENSLAFG00000007150CSDE19691.051ENSPVAG00000008225CSDE19591.051Pteropus_vampyrus
ENSLAFG00000007150CSDE19677.243ENSPNYG00000013745csde110077.243Pundamilia_nyererei
ENSLAFG00000007150CSDE19677.013ENSPNAG00000001958csde110077.013Pygocentrus_nattereri
ENSLAFG00000007150CSDE19693.233ENSRNOG00000061058Csde110093.233Rattus_norvegicus
ENSLAFG00000007150CSDE19691.969ENSRBIG00000038966-9591.969Rhinopithecus_bieti
ENSLAFG00000007150CSDE19694.010ENSRBIG00000038088-9995.161Rhinopithecus_bieti
ENSLAFG00000007150CSDE19897.577ENSRROG00000043101CSDE19997.577Rhinopithecus_roxellana
ENSLAFG00000007150CSDE19697.526ENSSBOG00000035592CSDE19597.526Saimiri_boliviensis_boliviensis
ENSLAFG00000007150CSDE19694.785ENSSHAG00000009831CSDE110094.785Sarcophilus_harrisii
ENSLAFG00000007150CSDE19676.463ENSSFOG00015007498csde110076.463Scleropages_formosus
ENSLAFG00000007150CSDE19677.662ENSSMAG00000007203csde110077.662Scophthalmus_maximus
ENSLAFG00000007150CSDE19677.403ENSSDUG00000015380csde110077.403Seriola_dumerili
ENSLAFG00000007150CSDE19677.403ENSSLDG00000008819csde110077.403Seriola_lalandi_dorsalis
ENSLAFG00000007150CSDE19696.109ENSSARG00000000738CSDE19596.109Sorex_araneus
ENSLAFG00000007150CSDE19691.004ENSSPUG00000008714CSDE110091.004Sphenodon_punctatus
ENSLAFG00000007150CSDE19677.403ENSSPAG00000000716csde110077.403Stegastes_partitus
ENSLAFG00000007150CSDE19697.523ENSSSCG00000006752CSDE110097.523Sus_scrofa
ENSLAFG00000007150CSDE19686.625ENSTGUG00000000972CSDE110086.625Taeniopygia_guttata
ENSLAFG00000007150CSDE19674.512ENSTRUG00000007996csde110074.512Takifugu_rubripes
ENSLAFG00000007150CSDE18973.563ENSTNIG00000010878csde110073.563Tetraodon_nigroviridis
ENSLAFG00000007150CSDE18998.718ENSTBEG00000011880-6298.718Tupaia_belangeri
ENSLAFG00000007150CSDE19696.498ENSTTRG00000015583CSDE19596.498Tursiops_truncatus
ENSLAFG00000007150CSDE18692.754ENSUAMG00000024289-9992.754Ursus_americanus
ENSLAFG00000007150CSDE18298.071ENSUAMG00000021779-10098.071Ursus_americanus
ENSLAFG00000007150CSDE19790.065ENSUMAG00000009720-9890.065Ursus_maritimus
ENSLAFG00000007150CSDE18396.675ENSUMAG00000011714-9996.675Ursus_maritimus
ENSLAFG00000007150CSDE19698.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSLAFG00000007150CSDE18693.421ENSVVUG00000009890CSDE19493.421Vulpes_vulpes
ENSLAFG00000007150CSDE19682.022ENSXETG00000021448csde110082.022Xenopus_tropicalis
ENSLAFG00000007150CSDE18887.273ENSXCOG00000000035csde18587.273Xiphophorus_couchianus
ENSLAFG00000007150CSDE19477.454ENSXMAG00000009080csde19877.454Xiphophorus_maculatus

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