EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000007201 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 11258 bases
Position: chrscaffold_71:4707167-4718424
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000022983	KH_1	PF00013.29	2.3e-07	1	1
ENSLAFP00000006058	KH_1	PF00013.29	2.5e-07	1	1
ENSLAFP00000022983	zf-CCHC	PF00098.23	0.00015	1	1
ENSLAFP00000006058	zf-CCHC	PF00098.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007203	SF1-202	1935	-	ENSLAFP00000006058	645 (aa)	-	G3SZK7
ENSLAFT00000028813	SF1-201	1797	-	ENSLAFP00000022983	598 (aa)	-	G3U575

Gene Model

Click here to download ENSLAFG00000007201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007201	SF1	63	83.733	ENSAPOG00000012341	sf1	59	79.376	Acanthochromis_polyacanthus
ENSLAFG00000007201	SF1	100	94.574	ENSAMEG00000017828	SF1	100	94.018	Ailuropoda_melanoleuca
ENSLAFG00000007201	SF1	63	81.266	ENSACIG00000016514	sf1	61	78.780	Amphilophus_citrinellus
ENSLAFG00000007201	SF1	63	83.733	ENSAOCG00000010934	sf1	59	79.376	Amphiprion_ocellaris
ENSLAFG00000007201	SF1	63	83.733	ENSAPEG00000009498	sf1	59	79.376	Amphiprion_percula
ENSLAFG00000007201	SF1	63	82.759	ENSATEG00000001894	sf1	60	78.795	Anabas_testudineus
ENSLAFG00000007201	SF1	86	87.748	ENSANAG00000022607	-	92	87.207	Aotus_nancymaae
ENSLAFG00000007201	SF1	100	95.504	ENSANAG00000026664	-	99	95.504	Aotus_nancymaae
ENSLAFG00000007201	SF1	62	84.097	ENSACLG00000007633	sf1	61	80.488	Astatotilapia_calliptera
ENSLAFG00000007201	SF1	62	86.059	ENSAMXG00000003630	sf1	50	80.392	Astyanax_mexicanus
ENSLAFG00000007201	SF1	90	99.654	ENSBTAG00000001035	SF1	90	99.654	Bos_taurus
ENSLAFG00000007201	SF1	100	95.659	ENSCJAG00000002780	SF1	99	95.659	Callithrix_jacchus
ENSLAFG00000007201	SF1	100	95.659	ENSCAFG00000014239	SF1	99	95.659	Canis_familiaris
ENSLAFG00000007201	SF1	100	95.659	ENSCAFG00020014381	SF1	99	95.659	Canis_lupus_dingo
ENSLAFG00000007201	SF1	90	99.654	ENSCHIG00000025867	SF1	95	99.232	Capra_hircus
ENSLAFG00000007201	SF1	57	98.566	ENSTSYG00000033618	SF1	91	98.039	Carlito_syrichta
ENSLAFG00000007201	SF1	75	98.636	ENSCAPG00000010762	SF1	87	98.636	Cavia_aperea
ENSLAFG00000007201	SF1	100	95.194	ENSCPOG00000012290	SF1	98	98.095	Cavia_porcellus
ENSLAFG00000007201	SF1	100	95.659	ENSCCAG00000037881	SF1	99	95.659	Cebus_capucinus
ENSLAFG00000007201	SF1	87	84.902	ENSCCAG00000023781	-	93	84.767	Cebus_capucinus
ENSLAFG00000007201	SF1	100	97.385	ENSCATG00000011564	SF1	99	97.385	Cercocebus_atys
ENSLAFG00000007201	SF1	81	99.232	ENSCSAG00000007258	SF1	95	99.232	Chlorocebus_sabaeus
ENSLAFG00000007201	SF1	71	89.070	ENSCHOG00000006008	SF1	79	93.301	Choloepus_hoffmanni
ENSLAFG00000007201	SF1	80	86.293	ENSCPBG00000023763	SF1	66	84.942	Chrysemys_picta_bellii
ENSLAFG00000007201	SF1	64	57.584	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSLAFG00000007201	SF1	72	56.077	ENSCSAVG00000009055	-	56	65.465	Ciona_savignyi
ENSLAFG00000007201	SF1	100	95.659	ENSCANG00000042201	SF1	99	95.659	Colobus_angolensis_palliatus
ENSLAFG00000007201	SF1	99	98.137	ENSCGRG00001003677	Sf1	99	98.137	Cricetulus_griseus_chok1gshd
ENSLAFG00000007201	SF1	81	97.524	ENSCGRG00000001708	Sf1	97	97.524	Cricetulus_griseus_crigri
ENSLAFG00000007201	SF1	67	79.901	ENSCSEG00000014375	sf1	57	77.778	Cynoglossus_semilaevis
ENSLAFG00000007201	SF1	63	84.043	ENSCVAG00000001670	sf1	63	79.518	Cyprinodon_variegatus
ENSLAFG00000007201	SF1	66	81.934	ENSDARG00000008188	sf1	97	74.144	Danio_rerio
ENSLAFG00000007201	SF1	82	97.727	ENSDNOG00000001282	SF1	96	97.727	Dasypus_novemcinctus
ENSLAFG00000007201	SF1	99	97.823	ENSDORG00000016334	Sf1	99	97.823	Dipodomys_ordii
ENSLAFG00000007201	SF1	86	92.072	ENSETEG00000012830	SF1	77	90.991	Echinops_telfairi
ENSLAFG00000007201	SF1	81	98.848	ENSEASG00005018272	SF1	95	98.848	Equus_asinus_asinus
ENSLAFG00000007201	SF1	81	99.040	ENSECAG00000024544	SF1	95	99.040	Equus_caballus
ENSLAFG00000007201	SF1	67	94.321	ENSEEUG00000001058	SF1	100	98.982	Erinaceus_europaeus
ENSLAFG00000007201	SF1	63	82.493	ENSELUG00000013225	sf1	54	79.475	Esox_lucius
ENSLAFG00000007201	SF1	100	95.659	ENSFCAG00000012231	SF1	99	95.659	Felis_catus
ENSLAFG00000007201	SF1	99	94.081	ENSFDAG00000009833	SF1	99	94.081	Fukomys_damarensis
ENSLAFG00000007201	SF1	63	83.069	ENSFHEG00000022656	sf1	59	78.810	Fundulus_heteroclitus
ENSLAFG00000007201	SF1	81	70.204	ENSGMOG00000007469	sf1	60	87.651	Gadus_morhua
ENSLAFG00000007201	SF1	63	84.309	ENSGAFG00000019284	sf1	76	79.412	Gambusia_affinis
ENSLAFG00000007201	SF1	72	89.044	ENSGAGG00000021691	SF1	72	84.942	Gopherus_agassizii
ENSLAFG00000007201	SF1	63	84.309	ENSHBUG00000011598	sf1	59	80.723	Haplochromis_burtoni
ENSLAFG00000007201	SF1	100	95.814	ENSHGLG00000009541	SF1	99	95.814	Heterocephalus_glaber_female
ENSLAFG00000007201	SF1	83	76.596	ENSHGLG00100008255	-	92	86.325	Heterocephalus_glaber_male
ENSLAFG00000007201	SF1	67	88.966	ENSHGLG00100008076	-	87	86.806	Heterocephalus_glaber_male
ENSLAFG00000007201	SF1	96	82.686	ENSHGLG00100013879	-	87	98.636	Heterocephalus_glaber_male
ENSLAFG00000007201	SF1	64	81.510	ENSHCOG00000011388	sf1	58	77.859	Hippocampus_comes
ENSLAFG00000007201	SF1	72	96.667	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSLAFG00000007201	SF1	99	95.327	ENSSTOG00000009790	-	100	95.327	Ictidomys_tridecemlineatus
ENSLAFG00000007201	SF1	100	95.349	ENSJJAG00000011788	Sf1	99	95.349	Jaculus_jaculus
ENSLAFG00000007201	SF1	64	83.594	ENSKMAG00000005854	sf1	62	79.714	Kryptolebias_marmoratus
ENSLAFG00000007201	SF1	61	82.787	ENSLBEG00000019836	sf1	84	72.125	Labrus_bergylta
ENSLAFG00000007201	SF1	69	79.327	ENSLACG00000018493	SF1	86	75.460	Latimeria_chalumnae
ENSLAFG00000007201	SF1	63	85.561	ENSLOCG00000002130	sf1	59	81.034	Lepisosteus_oculatus
ENSLAFG00000007201	SF1	100	97.385	ENSMFAG00000033122	SF1	99	97.385	Macaca_fascicularis
ENSLAFG00000007201	SF1	100	95.659	ENSMMUG00000022606	SF1	99	99.017	Macaca_mulatta
ENSLAFG00000007201	SF1	100	97.385	ENSMNEG00000037901	SF1	99	97.385	Macaca_nemestrina
ENSLAFG00000007201	SF1	99	97.222	ENSMLEG00000040706	SF1	99	97.222	Mandrillus_leucophaeus
ENSLAFG00000007201	SF1	63	83.511	ENSMAMG00000001780	sf1	58	79.707	Mastacembelus_armatus
ENSLAFG00000007201	SF1	63	84.043	ENSMZEG00005009196	sf1	59	80.482	Maylandia_zebra
ENSLAFG00000007201	SF1	100	94.884	ENSMAUG00000014064	Sf1	99	94.884	Mesocricetus_auratus
ENSLAFG00000007201	SF1	100	95.659	ENSMICG00000001202	SF1	99	95.659	Microcebus_murinus
ENSLAFG00000007201	SF1	100	94.884	ENSMOCG00000022038	Sf1	99	94.884	Microtus_ochrogaster
ENSLAFG00000007201	SF1	63	80.851	ENSMMOG00000020474	sf1	60	76.812	Mola_mola
ENSLAFG00000007201	SF1	72	93.622	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSLAFG00000007201	SF1	63	81.266	ENSMALG00000020521	sf1	68	77.143	Monopterus_albus
ENSLAFG00000007201	SF1	100	94.884	MGP_CAROLIEiJ_G0022607	Sf1	100	99.251	Mus_caroli
ENSLAFG00000007201	SF1	100	94.884	ENSMUSG00000024949	Sf1	100	99.251	Mus_musculus
ENSLAFG00000007201	SF1	100	94.884	MGP_PahariEiJ_G0014101	Sf1	100	99.251	Mus_pahari
ENSLAFG00000007201	SF1	100	94.884	MGP_SPRETEiJ_G0023518	Sf1	100	99.251	Mus_spretus
ENSLAFG00000007201	SF1	90	99.481	ENSMPUG00000012684	SF1	90	99.481	Mustela_putorius_furo
ENSLAFG00000007201	SF1	90	99.481	ENSMLUG00000015217	-	90	99.481	Myotis_lucifugus
ENSLAFG00000007201	SF1	93	73.554	ENSMLUG00000029800	-	77	94.619	Myotis_lucifugus
ENSLAFG00000007201	SF1	100	95.349	ENSNGAG00000005550	Sf1	99	95.349	Nannospalax_galili
ENSLAFG00000007201	SF1	63	83.511	ENSNBRG00000017606	sf1	60	80.488	Neolamprologus_brichardi
ENSLAFG00000007201	SF1	100	96.899	ENSNLEG00000005236	-	99	96.899	Nomascus_leucogenys
ENSLAFG00000007201	SF1	80	97.856	ENSMEUG00000013424	SF1	97	97.856	Notamacropus_eugenii
ENSLAFG00000007201	SF1	74	98.737	ENSOPRG00000005008	SF1	96	98.737	Ochotona_princeps
ENSLAFG00000007201	SF1	100	92.093	ENSODEG00000006102	-	99	92.093	Octodon_degus
ENSLAFG00000007201	SF1	63	84.309	ENSONIG00000015728	sf1	59	80.723	Oreochromis_niloticus
ENSLAFG00000007201	SF1	63	84.975	ENSOANG00000002909	SF1	96	87.468	Ornithorhynchus_anatinus
ENSLAFG00000007201	SF1	100	95.814	ENSOCUG00000026486	SF1	100	95.814	Oryctolagus_cuniculus
ENSLAFG00000007201	SF1	65	81.654	ENSORLG00000011853	sf1	58	78.208	Oryzias_latipes
ENSLAFG00000007201	SF1	65	81.654	ENSORLG00020011834	sf1	58	78.208	Oryzias_latipes_hni
ENSLAFG00000007201	SF1	63	81.481	ENSORLG00015012855	sf1	59	77.966	Oryzias_latipes_hsok
ENSLAFG00000007201	SF1	63	83.069	ENSOMEG00000005210	sf1	60	80.145	Oryzias_melastigma
ENSLAFG00000007201	SF1	100	95.814	ENSOGAG00000016196	SF1	99	95.814	Otolemur_garnettii
ENSLAFG00000007201	SF1	81	94.689	ENSOARG00000009166	SF1	80	99.564	Ovis_aries
ENSLAFG00000007201	SF1	100	95.209	ENSPPAG00000002799	-	95	99.499	Pan_paniscus
ENSLAFG00000007201	SF1	99	95.639	ENSPPRG00000013566	SF1	98	95.639	Panthera_pardus
ENSLAFG00000007201	SF1	79	98.646	ENSPTIG00000016141	SF1	91	98.646	Panthera_tigris_altaica
ENSLAFG00000007201	SF1	100	95.659	ENSPTRG00000003846	SF1	97	99.522	Pan_troglodytes
ENSLAFG00000007201	SF1	100	97.385	ENSPANG00000020754	SF1	99	97.385	Papio_anubis
ENSLAFG00000007201	SF1	57	75.714	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSLAFG00000007201	SF1	54	86.895	ENSPSIG00000003610	SF1	84	82.477	Pelodiscus_sinensis
ENSLAFG00000007201	SF1	99	98.447	ENSPEMG00000010463	Sf1	98	98.447	Peromyscus_maniculatus_bairdii
ENSLAFG00000007201	SF1	100	92.403	ENSPCIG00000018173	SF1	99	91.176	Phascolarctos_cinereus
ENSLAFG00000007201	SF1	63	84.574	ENSPFOG00000013683	sf1	68	79.245	Poecilia_formosa
ENSLAFG00000007201	SF1	63	84.574	ENSPLAG00000018076	sf1	61	80.288	Poecilia_latipinna
ENSLAFG00000007201	SF1	63	84.574	ENSPMEG00000005726	sf1	62	80.529	Poecilia_mexicana
ENSLAFG00000007201	SF1	63	84.043	ENSPREG00000004155	sf1	59	80.048	Poecilia_reticulata
ENSLAFG00000007201	SF1	100	95.504	ENSPPYG00000003098	-	98	99.423	Pongo_abelii
ENSLAFG00000007201	SF1	82	98.289	ENSPCAG00000013631	SF1	78	98.289	Procavia_capensis
ENSLAFG00000007201	SF1	100	95.814	ENSPCOG00000027546	SF1	99	95.814	Propithecus_coquereli
ENSLAFG00000007201	SF1	82	97.719	ENSPVAG00000016938	SF1	79	97.719	Pteropus_vampyrus
ENSLAFG00000007201	SF1	63	84.043	ENSPNYG00000004673	sf1	59	80.482	Pundamilia_nyererei
ENSLAFG00000007201	SF1	63	85.411	ENSPNAG00000013072	sf1	59	80.241	Pygocentrus_nattereri
ENSLAFG00000007201	SF1	90	98.962	ENSRNOG00000021085	Sf1	90	98.962	Rattus_norvegicus
ENSLAFG00000007201	SF1	100	91.628	ENSRBIG00000042818	SF1	99	91.628	Rhinopithecus_bieti
ENSLAFG00000007201	SF1	99	86.625	ENSRROG00000045655	SF1	98	98.039	Rhinopithecus_roxellana
ENSLAFG00000007201	SF1	64	37.674	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSLAFG00000007201	SF1	97	73.984	ENSSBOG00000022267	-	97	81.127	Saimiri_boliviensis_boliviensis
ENSLAFG00000007201	SF1	69	93.659	ENSSHAG00000006841	SF1	75	93.659	Sarcophilus_harrisii
ENSLAFG00000007201	SF1	67	81.546	ENSSFOG00015021978	sf1	55	75.656	Scleropages_formosus
ENSLAFG00000007201	SF1	69	78.251	ENSSMAG00000007549	sf1	63	78.199	Scophthalmus_maximus
ENSLAFG00000007201	SF1	64	81.558	ENSSDUG00000003903	sf1	63	77.778	Seriola_dumerili
ENSLAFG00000007201	SF1	58	80.577	ENSSLDG00000013075	sf1	61	77.778	Seriola_lalandi_dorsalis
ENSLAFG00000007201	SF1	80	95.358	ENSSARG00000008180	SF1	100	95.358	Sorex_araneus
ENSLAFG00000007201	SF1	78	82.567	ENSSPUG00000012907	SF1	86	81.034	Sphenodon_punctatus
ENSLAFG00000007201	SF1	63	82.933	ENSSPAG00000019060	sf1	58	77.566	Stegastes_partitus
ENSLAFG00000007201	SF1	100	95.504	ENSSSCG00000013021	SF1	99	95.504	Sus_scrofa
ENSLAFG00000007201	SF1	82	62.243	ENSTNIG00000004820	sf1	78	68.974	Tetraodon_nigroviridis
ENSLAFG00000007201	SF1	92	99.099	ENSTBEG00000013133	SF1	80	99.099	Tupaia_belangeri
ENSLAFG00000007201	SF1	80	94.788	ENSTTRG00000008857	SF1	96	95.155	Tursiops_truncatus
ENSLAFG00000007201	SF1	73	96.391	ENSUAMG00000011977	SF1	90	96.391	Ursus_americanus
ENSLAFG00000007201	SF1	79	99.542	ENSUMAG00000007268	SF1	92	99.536	Ursus_maritimus
ENSLAFG00000007201	SF1	56	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSLAFG00000007201	SF1	81	99.232	ENSVVUG00000028585	SF1	95	99.232	Vulpes_vulpes
ENSLAFG00000007201	SF1	96	71.619	ENSXETG00000008434	sf1	68	81.598	Xenopus_tropicalis
ENSLAFG00000007201	SF1	62	83.602	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSLAFG00000007201	SF1	63	83.820	ENSXMAG00000007822	sf1	61	80.529	Xiphophorus_maculatus