EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000007628 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Plus strand
Length: 27565 bases
Position: chrscaffold_34:6683848-6711412
Accession: 100659554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000006412	RRM_1	PF00076.22	9.3e-28	1	2
ENSLAFP00000006412	RRM_1	PF00076.22	9.3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007629	TRNAU1AP-201	864	-	ENSLAFP00000006412	287 (aa)	XP_003415488	G3T0D1

Gene Model

Click here to download ENSLAFG00000007628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000007628	TRNAU1AP	60	34.586	ENSLAFG00000003412	TIAL1	56	34.586

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSG00000180098	TRNAU1AP	100	99.652	Homo_sapiens
ENSLAFG00000007628	TRNAU1AP	98	58.746	ENSAPOG00000007148	TRNAU1AP	98	58.746	Acanthochromis_polyacanthus
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSAMEG00000011367	TRNAU1AP	100	98.606	Ailuropoda_melanoleuca
ENSLAFG00000007628	TRNAU1AP	91	71.264	ENSACIG00000004161	trnau1apa	93	71.264	Amphilophus_citrinellus
ENSLAFG00000007628	TRNAU1AP	98	58.746	ENSAOCG00000008056	trnau1apa	98	58.746	Amphiprion_ocellaris
ENSLAFG00000007628	TRNAU1AP	98	58.746	ENSAPEG00000008868	trnau1apa	98	58.923	Amphiprion_percula
ENSLAFG00000007628	TRNAU1AP	98	58.521	ENSATEG00000012140	trnau1apa	98	56.592	Anabas_testudineus
ENSLAFG00000007628	TRNAU1AP	94	93.704	ENSAPLG00000002606	TRNAU1AP	99	93.704	Anas_platyrhynchos
ENSLAFG00000007628	TRNAU1AP	67	52.083	ENSACAG00000004205	-	73	52.083	Anolis_carolinensis
ENSLAFG00000007628	TRNAU1AP	99	75.874	ENSACAG00000003995	-	99	75.874	Anolis_carolinensis
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSANAG00000018976	TRNAU1AP	100	99.652	Aotus_nancymaae
ENSLAFG00000007628	TRNAU1AP	98	59.333	ENSACLG00000018515	trnau1apa	98	60.738	Astatotilapia_calliptera
ENSLAFG00000007628	TRNAU1AP	95	66.667	ENSAMXG00000029240	-	98	66.667	Astyanax_mexicanus
ENSLAFG00000007628	TRNAU1AP	95	58.123	ENSAMXG00000013750	trnau1apa	90	58.123	Astyanax_mexicanus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSBTAG00000010393	TRNAU1AP	100	99.303	Bos_taurus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSCJAG00000009717	TRNAU1AP	100	99.652	Callithrix_jacchus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSCAFG00000011735	TRNAU1AP	100	99.303	Canis_familiaris
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSCAFG00020023584	TRNAU1AP	100	99.303	Canis_lupus_dingo
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSCHIG00000023215	TRNAU1AP	100	98.955	Capra_hircus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSTSYG00000003506	TRNAU1AP	100	99.303	Carlito_syrichta
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSCPOG00000001925	TRNAU1AP	100	98.955	Cavia_porcellus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSCCAG00000037506	TRNAU1AP	100	99.652	Cebus_capucinus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSCATG00000044617	TRNAU1AP	100	99.303	Cercocebus_atys
ENSLAFG00000007628	TRNAU1AP	100	98.258	ENSCLAG00000008223	TRNAU1AP	100	98.258	Chinchilla_lanigera
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSCSAG00000001014	TRNAU1AP	100	99.303	Chlorocebus_sabaeus
ENSLAFG00000007628	TRNAU1AP	95	94.891	ENSCPBG00000000121	TRNAU1AP	100	94.891	Chrysemys_picta_bellii
ENSLAFG00000007628	TRNAU1AP	59	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSLAFG00000007628	TRNAU1AP	100	87.805	ENSCANG00000041949	TRNAU1AP	100	100.000	Colobus_angolensis_palliatus
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSCGRG00001004713	Trnau1ap	100	98.955	Cricetulus_griseus_chok1gshd
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSCGRG00000014532	Trnau1ap	100	98.955	Cricetulus_griseus_crigri
ENSLAFG00000007628	TRNAU1AP	98	58.667	ENSCSEG00000006663	trnau1apa	95	57.285	Cynoglossus_semilaevis
ENSLAFG00000007628	TRNAU1AP	97	58.163	ENSCVAG00000018069	trnau1apa	94	59.707	Cyprinodon_variegatus
ENSLAFG00000007628	TRNAU1AP	95	53.929	ENSDARG00000101323	trnau1apa	88	52.313	Danio_rerio
ENSLAFG00000007628	TRNAU1AP	67	77.083	ENSDNOG00000047959	-	97	77.540	Dasypus_novemcinctus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSDNOG00000033009	TRNAU1AP	100	99.303	Dasypus_novemcinctus
ENSLAFG00000007628	TRNAU1AP	99	91.259	ENSDORG00000006349	Trnau1ap	100	99.567	Dipodomys_ordii
ENSLAFG00000007628	TRNAU1AP	96	38.344	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSLAFG00000007628	TRNAU1AP	85	94.694	ENSETEG00000012594	TRNAU1AP	100	94.694	Echinops_telfairi
ENSLAFG00000007628	TRNAU1AP	55	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSEASG00005010062	TRNAU1AP	100	99.652	Equus_asinus_asinus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSECAG00000012980	TRNAU1AP	100	99.652	Equus_caballus
ENSLAFG00000007628	TRNAU1AP	96	71.579	ENSELUG00000022790	-	94	52.740	Esox_lucius
ENSLAFG00000007628	TRNAU1AP	96	63.415	ENSELUG00000017686	trnau1apa	94	63.066	Esox_lucius
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSFCAG00000013401	TRNAU1AP	100	99.652	Felis_catus
ENSLAFG00000007628	TRNAU1AP	95	93.796	ENSFALG00000001371	TRNAU1AP	100	93.796	Ficedula_albicollis
ENSLAFG00000007628	TRNAU1AP	100	98.258	ENSFDAG00000018599	TRNAU1AP	100	98.258	Fukomys_damarensis
ENSLAFG00000007628	TRNAU1AP	79	61.224	ENSFHEG00000018232	trnau1apa	86	57.143	Fundulus_heteroclitus
ENSLAFG00000007628	TRNAU1AP	95	53.846	ENSGMOG00000016508	trnau1apa	93	54.930	Gadus_morhua
ENSLAFG00000007628	TRNAU1AP	68	49.296	ENSGALG00000012721	C2H6orf52	95	44.788	Gallus_gallus
ENSLAFG00000007628	TRNAU1AP	100	93.380	ENSGALG00000001310	-	100	93.380	Gallus_gallus
ENSLAFG00000007628	TRNAU1AP	78	58.824	ENSGAFG00000004928	trnau1apa	90	59.664	Gambusia_affinis
ENSLAFG00000007628	TRNAU1AP	98	60.616	ENSGACG00000001443	trnau1apa	95	60.274	Gasterosteus_aculeatus
ENSLAFG00000007628	TRNAU1AP	95	95.255	ENSGAGG00000004940	TRNAU1AP	100	95.255	Gopherus_agassizii
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSGGOG00000003511	TRNAU1AP	100	99.652	Gorilla_gorilla
ENSLAFG00000007628	TRNAU1AP	98	58.361	ENSHBUG00000002510	trnau1apa	98	59.736	Haplochromis_burtoni
ENSLAFG00000007628	TRNAU1AP	100	98.258	ENSHGLG00000010380	TRNAU1AP	100	98.258	Heterocephalus_glaber_female
ENSLAFG00000007628	TRNAU1AP	100	95.819	ENSHGLG00100012699	TRNAU1AP	100	95.819	Heterocephalus_glaber_male
ENSLAFG00000007628	TRNAU1AP	99	57.426	ENSHCOG00000014770	trnau1apa	97	55.519	Hippocampus_comes
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSSTOG00000000079	TRNAU1AP	100	99.652	Ictidomys_tridecemlineatus
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSJJAG00000010128	Trnau1ap	100	98.606	Jaculus_jaculus
ENSLAFG00000007628	TRNAU1AP	95	60.554	ENSKMAG00000001230	trnau1apa	93	58.824	Kryptolebias_marmoratus
ENSLAFG00000007628	TRNAU1AP	95	61.092	ENSLBEG00000011683	trnau1apa	93	60.204	Labrus_bergylta
ENSLAFG00000007628	TRNAU1AP	99	72.281	ENSLACG00000005541	TRNAU1AP	99	72.281	Latimeria_chalumnae
ENSLAFG00000007628	TRNAU1AP	99	72.378	ENSLOCG00000004041	trnau1apa	99	71.329	Lepisosteus_oculatus
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMFAG00000043751	TRNAU1AP	100	99.303	Macaca_fascicularis
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMMUG00000006561	TRNAU1AP	100	99.303	Macaca_mulatta
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMNEG00000044201	TRNAU1AP	100	99.303	Macaca_nemestrina
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMLEG00000015649	TRNAU1AP	100	99.303	Mandrillus_leucophaeus
ENSLAFG00000007628	TRNAU1AP	98	59.283	ENSMAMG00000001247	trnau1apa	98	59.170	Mastacembelus_armatus
ENSLAFG00000007628	TRNAU1AP	98	59.333	ENSMZEG00005017722	trnau1apa	98	60.738	Maylandia_zebra
ENSLAFG00000007628	TRNAU1AP	97	93.165	ENSMGAG00000002105	TRNAU1AP	100	93.165	Meleagris_gallopavo
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMICG00000008386	TRNAU1AP	100	99.435	Microcebus_murinus
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSMOCG00000011189	Trnau1ap	100	98.606	Microtus_ochrogaster
ENSLAFG00000007628	TRNAU1AP	95	58.088	ENSMMOG00000012107	trnau1apa	92	58.088	Mola_mola
ENSLAFG00000007628	TRNAU1AP	100	95.470	ENSMODG00000010927	TRNAU1AP	100	95.470	Monodelphis_domestica
ENSLAFG00000007628	TRNAU1AP	96	61.433	ENSMALG00000016778	trnau1apa	94	58.703	Monopterus_albus
ENSLAFG00000007628	TRNAU1AP	100	98.606	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	98.913	Mus_caroli
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSMUSG00000028898	Trnau1ap	100	98.913	Mus_musculus
ENSLAFG00000007628	TRNAU1AP	100	98.955	MGP_PahariEiJ_G0028896	Trnau1ap	100	98.955	Mus_pahari
ENSLAFG00000007628	TRNAU1AP	100	98.258	MGP_SPRETEiJ_G0027544	Trnau1ap	100	98.913	Mus_spretus
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSMPUG00000015511	TRNAU1AP	100	98.955	Mustela_putorius_furo
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSMLUG00000012586	TRNAU1AP	100	99.303	Myotis_lucifugus
ENSLAFG00000007628	TRNAU1AP	100	97.213	ENSNGAG00000015881	Trnau1ap	100	97.213	Nannospalax_galili
ENSLAFG00000007628	TRNAU1AP	99	57.338	ENSNBRG00000001758	trnau1apa	98	57.338	Neolamprologus_brichardi
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSNLEG00000009822	TRNAU1AP	100	99.652	Nomascus_leucogenys
ENSLAFG00000007628	TRNAU1AP	97	94.245	ENSMEUG00000006117	TRNAU1AP	100	94.245	Notamacropus_eugenii
ENSLAFG00000007628	TRNAU1AP	70	98.182	ENSOPRG00000007084	-	69	98.182	Ochotona_princeps
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSODEG00000002970	TRNAU1AP	100	98.606	Octodon_degus
ENSLAFG00000007628	TRNAU1AP	80	60.082	ENSONIG00000004715	trnau1apa	95	60.331	Oreochromis_niloticus
ENSLAFG00000007628	TRNAU1AP	99	74.476	ENSOANG00000005325	-	99	74.476	Ornithorhynchus_anatinus
ENSLAFG00000007628	TRNAU1AP	100	77.778	ENSOCUG00000002353	-	100	77.778	Oryctolagus_cuniculus
ENSLAFG00000007628	TRNAU1AP	89	76.953	ENSOCUG00000006834	-	100	75.000	Oryctolagus_cuniculus
ENSLAFG00000007628	TRNAU1AP	100	97.561	ENSOCUG00000011704	-	100	97.561	Oryctolagus_cuniculus
ENSLAFG00000007628	TRNAU1AP	98	59.220	ENSORLG00000010428	trnau1apa	95	57.394	Oryzias_latipes
ENSLAFG00000007628	TRNAU1AP	98	58.362	ENSORLG00020000926	trnau1ap	95	57.192	Oryzias_latipes_hni
ENSLAFG00000007628	TRNAU1AP	98	58.362	ENSORLG00015009858	trnau1ap	95	57.192	Oryzias_latipes_hsok
ENSLAFG00000007628	TRNAU1AP	98	59.386	ENSOMEG00000007873	trnau1apa	95	56.507	Oryzias_melastigma
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSOGAG00000002274	TRNAU1AP	100	99.303	Otolemur_garnettii
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSOARG00000002843	TRNAU1AP	100	98.955	Ovis_aries
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSPPAG00000033927	TRNAU1AP	100	99.652	Pan_paniscus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSPPRG00000004416	TRNAU1AP	100	99.652	Panthera_pardus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSPTIG00000016677	TRNAU1AP	100	99.652	Panthera_tigris_altaica
ENSLAFG00000007628	TRNAU1AP	93	80.812	ENSPTRG00000000434	-	97	79.336	Pan_troglodytes
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSPANG00000016019	TRNAU1AP	100	99.303	Papio_anubis
ENSLAFG00000007628	TRNAU1AP	94	75.532	ENSPKIG00000022205	-	93	78.652	Paramormyrops_kingsleyae
ENSLAFG00000007628	TRNAU1AP	95	60.071	ENSPKIG00000015511	trnau1apa	92	58.304	Paramormyrops_kingsleyae
ENSLAFG00000007628	TRNAU1AP	95	95.255	ENSPSIG00000006864	TRNAU1AP	100	95.255	Pelodiscus_sinensis
ENSLAFG00000007628	TRNAU1AP	94	61.765	ENSPMGG00000023893	trnau1apa	91	60.886	Periophthalmus_magnuspinnatus
ENSLAFG00000007628	TRNAU1AP	100	98.606	ENSPEMG00000007877	Trnau1ap	100	98.606	Peromyscus_maniculatus_bairdii
ENSLAFG00000007628	TRNAU1AP	78	61.435	ENSPMAG00000005934	trnau1apa	96	60.648	Petromyzon_marinus
ENSLAFG00000007628	TRNAU1AP	60	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSLAFG00000007628	TRNAU1AP	95	57.292	ENSPFOG00000008100	trnau1apa	93	57.986	Poecilia_formosa
ENSLAFG00000007628	TRNAU1AP	91	57.040	ENSPLAG00000010236	trnau1apa	93	57.762	Poecilia_latipinna
ENSLAFG00000007628	TRNAU1AP	96	56.207	ENSPMEG00000016387	trnau1apa	92	56.897	Poecilia_mexicana
ENSLAFG00000007628	TRNAU1AP	93	54.275	ENSPREG00000019821	trnau1apa	86	65.476	Poecilia_reticulata
ENSLAFG00000007628	TRNAU1AP	100	78.397	ENSPPYG00000001639	-	100	86.822	Pongo_abelii
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSPCOG00000027712	-	100	99.435	Propithecus_coquereli
ENSLAFG00000007628	TRNAU1AP	98	82.206	ENSPCOG00000023470	-	100	82.206	Propithecus_coquereli
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSPVAG00000017214	TRNAU1AP	100	99.652	Pteropus_vampyrus
ENSLAFG00000007628	TRNAU1AP	98	58.361	ENSPNYG00000010130	trnau1apa	98	60.079	Pundamilia_nyererei
ENSLAFG00000007628	TRNAU1AP	95	55.124	ENSPNAG00000024905	trnau1apa	91	54.317	Pygocentrus_nattereri
ENSLAFG00000007628	TRNAU1AP	94	90.406	ENSRNOG00000055344	Trnau1ap	92	90.406	Rattus_norvegicus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSRBIG00000029083	TRNAU1AP	100	99.652	Rhinopithecus_bieti
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSRROG00000029128	TRNAU1AP	100	99.652	Rhinopithecus_roxellana
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSSBOG00000021299	TRNAU1AP	100	99.652	Saimiri_boliviensis_boliviensis
ENSLAFG00000007628	TRNAU1AP	100	94.774	ENSSHAG00000008108	TRNAU1AP	100	94.774	Sarcophilus_harrisii
ENSLAFG00000007628	TRNAU1AP	98	54.045	ENSSMAG00000020851	trnau1apa	98	57.377	Scophthalmus_maximus
ENSLAFG00000007628	TRNAU1AP	96	59.184	ENSSDUG00000011734	trnau1apa	94	57.823	Seriola_dumerili
ENSLAFG00000007628	TRNAU1AP	96	46.909	ENSSLDG00000012101	trnau1apa	92	50.896	Seriola_lalandi_dorsalis
ENSLAFG00000007628	TRNAU1AP	97	98.201	ENSSARG00000007536	TRNAU1AP	100	98.201	Sorex_araneus
ENSLAFG00000007628	TRNAU1AP	61	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSLAFG00000007628	TRNAU1AP	99	86.364	ENSSPUG00000010400	-	100	86.364	Sphenodon_punctatus
ENSLAFG00000007628	TRNAU1AP	98	58.306	ENSSPAG00000005029	trnau1apa	98	58.306	Stegastes_partitus
ENSLAFG00000007628	TRNAU1AP	100	99.652	ENSSSCG00000030284	TRNAU1AP	100	100.000	Sus_scrofa
ENSLAFG00000007628	TRNAU1AP	97	94.245	ENSTGUG00000000735	-	100	94.245	Taeniopygia_guttata
ENSLAFG00000007628	TRNAU1AP	68	53.061	ENSTGUG00000005908	-	100	53.061	Taeniopygia_guttata
ENSLAFG00000007628	TRNAU1AP	98	59.468	ENSTRUG00000003352	trnau1apa	98	58.804	Takifugu_rubripes
ENSLAFG00000007628	TRNAU1AP	98	57.426	ENSTNIG00000006129	trnau1apa	98	57.426	Tetraodon_nigroviridis
ENSLAFG00000007628	TRNAU1AP	85	88.163	ENSTBEG00000008049	-	100	88.163	Tupaia_belangeri
ENSLAFG00000007628	TRNAU1AP	100	99.303	ENSTTRG00000001854	TRNAU1AP	100	99.303	Tursiops_truncatus
ENSLAFG00000007628	TRNAU1AP	95	99.270	ENSUAMG00000008789	TRNAU1AP	100	99.270	Ursus_americanus
ENSLAFG00000007628	TRNAU1AP	100	98.955	ENSUMAG00000011068	TRNAU1AP	100	98.955	Ursus_maritimus
ENSLAFG00000007628	TRNAU1AP	100	89.041	ENSVPAG00000006778	TRNAU1AP	100	89.041	Vicugna_pacos
ENSLAFG00000007628	TRNAU1AP	99	97.535	ENSVVUG00000012518	TRNAU1AP	93	97.535	Vulpes_vulpes
ENSLAFG00000007628	TRNAU1AP	95	56.250	ENSXMAG00000017361	trnau1apa	93	57.986	Xiphophorus_maculatus