EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000007725 (Gene tree)
Gene ID: -
Gene Symbol: SRRT
Alias: ARS2|Asr2|serrate
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 12653 bases
Position: chrscaffold_152:73052-85704
Accession: 24101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000024667	ARS2	PF04959.13	1.3e-91	1	1
ENSLAFP00000006489	ARS2	PF04959.13	9.2e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007726	SRRT-202	2622	-	ENSLAFP00000006489	874 (aa)	-	G3T0I8
ENSLAFT00000031260	SRRT-201	2625	-	ENSLAFP00000024667	874 (aa)	-	G3UA09

Gene Model

Click here to download ENSLAFG00000007725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007725	SRRT	100	98.400	ENSG00000087087	SRRT	99	100.000	Homo_sapiens
ENSLAFG00000007725	SRRT	53	76.129	ENSAPOG00000002304	srrt	51	76.129	Acanthochromis_polyacanthus
ENSLAFG00000007725	SRRT	100	93.916	ENSAMEG00000014506	SRRT	100	93.916	Ailuropoda_melanoleuca
ENSLAFG00000007725	SRRT	95	64.868	ENSACIG00000015795	srrt	85	73.276	Amphilophus_citrinellus
ENSLAFG00000007725	SRRT	93	55.889	ENSAOCG00000009189	-	96	57.889	Amphiprion_ocellaris
ENSLAFG00000007725	SRRT	81	73.276	ENSAOCG00000009693	srrt	85	73.276	Amphiprion_ocellaris
ENSLAFG00000007725	SRRT	84	75.914	ENSAPEG00000003646	srrt	85	75.914	Amphiprion_percula
ENSLAFG00000007725	SRRT	93	55.889	ENSAPEG00000020016	-	96	57.889	Amphiprion_percula
ENSLAFG00000007725	SRRT	84	73.763	ENSATEG00000014425	srrt	86	74.624	Anabas_testudineus
ENSLAFG00000007725	SRRT	55	62.298	ENSATEG00000003652	-	85	64.092	Anabas_testudineus
ENSLAFG00000007725	SRRT	95	76.896	ENSACAG00000001014	SRRT	96	77.005	Anolis_carolinensis
ENSLAFG00000007725	SRRT	100	98.174	ENSANAG00000031718	SRRT	100	98.174	Aotus_nancymaae
ENSLAFG00000007725	SRRT	53	74.624	ENSACLG00000013156	srrt	50	74.624	Astatotilapia_calliptera
ENSLAFG00000007725	SRRT	93	52.257	ENSACLG00000009423	-	52	63.636	Astatotilapia_calliptera
ENSLAFG00000007725	SRRT	52	75.381	ENSAMXG00000016671	srrt	50	75.870	Astyanax_mexicanus
ENSLAFG00000007725	SRRT	100	97.374	ENSBTAG00000001134	SRRT	100	97.374	Bos_taurus
ENSLAFG00000007725	SRRT	61	47.656	WBGene00017085	E01A2.2	85	42.505	Caenorhabditis_elegans
ENSLAFG00000007725	SRRT	100	97.489	ENSCJAG00000014917	SRRT	100	97.489	Callithrix_jacchus
ENSLAFG00000007725	SRRT	100	98.288	ENSCAFG00000023538	SRRT	100	98.288	Canis_familiaris
ENSLAFG00000007725	SRRT	100	97.717	ENSCAFG00020013358	SRRT	100	97.717	Canis_lupus_dingo
ENSLAFG00000007725	SRRT	100	97.374	ENSCHIG00000010495	SRRT	100	97.374	Capra_hircus
ENSLAFG00000007725	SRRT	96	91.667	ENSTSYG00000036426	SRRT	99	92.464	Carlito_syrichta
ENSLAFG00000007725	SRRT	95	95.923	ENSCAPG00000013586	SRRT	100	95.923	Cavia_aperea
ENSLAFG00000007725	SRRT	100	97.719	ENSCPOG00000001739	SRRT	100	97.719	Cavia_porcellus
ENSLAFG00000007725	SRRT	100	97.945	ENSCCAG00000015877	SRRT	100	97.945	Cebus_capucinus
ENSLAFG00000007725	SRRT	100	97.829	ENSCATG00000036306	SRRT	100	97.829	Cercocebus_atys
ENSLAFG00000007725	SRRT	100	97.831	ENSCLAG00000007568	SRRT	100	97.831	Chinchilla_lanigera
ENSLAFG00000007725	SRRT	100	97.945	ENSCSAG00000017996	SRRT	100	97.945	Chlorocebus_sabaeus
ENSLAFG00000007725	SRRT	56	95.294	ENSCHOG00000007815	SRRT	67	95.294	Choloepus_hoffmanni
ENSLAFG00000007725	SRRT	75	81.679	ENSCPBG00000011553	SRRT	83	81.648	Chrysemys_picta_bellii
ENSLAFG00000007725	SRRT	100	43.063	ENSCING00000003506	-	54	52.075	Ciona_intestinalis
ENSLAFG00000007725	SRRT	100	41.056	ENSCSAVG00000008394	-	79	55.172	Ciona_savignyi
ENSLAFG00000007725	SRRT	100	97.260	ENSCANG00000034556	SRRT	100	97.260	Colobus_angolensis_palliatus
ENSLAFG00000007725	SRRT	100	97.035	ENSCGRG00001001594	Srrt	100	97.035	Cricetulus_griseus_chok1gshd
ENSLAFG00000007725	SRRT	98	87.311	ENSCGRG00000007292	Srrt	100	90.057	Cricetulus_griseus_crigri
ENSLAFG00000007725	SRRT	96	60.850	ENSCSEG00000017878	srrt	96	60.964	Cynoglossus_semilaevis
ENSLAFG00000007725	SRRT	90	55.499	ENSCVAG00000017344	-	95	55.244	Cyprinodon_variegatus
ENSLAFG00000007725	SRRT	95	64.657	ENSCVAG00000019848	srrt	54	74.839	Cyprinodon_variegatus
ENSLAFG00000007725	SRRT	53	75.751	ENSDARG00000017762	srrt	51	77.253	Danio_rerio
ENSLAFG00000007725	SRRT	100	98.174	ENSDNOG00000003851	SRRT	100	98.174	Dasypus_novemcinctus
ENSLAFG00000007725	SRRT	100	96.241	ENSDORG00000005584	Srrt	100	96.241	Dipodomys_ordii
ENSLAFG00000007725	SRRT	100	39.676	FBgn0033062	Ars2	67	52.966	Drosophila_melanogaster
ENSLAFG00000007725	SRRT	86	93.860	ENSETEG00000016175	SRRT	82	92.857	Echinops_telfairi
ENSLAFG00000007725	SRRT	78	53.540	ENSEBUG00000008517	-	76	65.278	Eptatretus_burgeri
ENSLAFG00000007725	SRRT	100	98.288	ENSEASG00005016956	SRRT	100	98.288	Equus_asinus_asinus
ENSLAFG00000007725	SRRT	100	98.402	ENSECAG00000012292	SRRT	100	98.402	Equus_caballus
ENSLAFG00000007725	SRRT	85	97.727	ENSEEUG00000009117	SRRT	85	97.727	Erinaceus_europaeus
ENSLAFG00000007725	SRRT	95	64.739	ENSELUG00000006651	srrt	96	64.246	Esox_lucius
ENSLAFG00000007725	SRRT	93	55.803	ENSELUG00000021216	-	53	64.449	Esox_lucius
ENSLAFG00000007725	SRRT	100	98.402	ENSFCAG00000006855	SRRT	100	98.402	Felis_catus
ENSLAFG00000007725	SRRT	57	52.564	ENSFALG00000007524	-	81	70.115	Ficedula_albicollis
ENSLAFG00000007725	SRRT	100	93.151	ENSFDAG00000021347	SRRT	98	90.070	Fukomys_damarensis
ENSLAFG00000007725	SRRT	55	55.031	ENSFHEG00000004105	-	93	55.508	Fundulus_heteroclitus
ENSLAFG00000007725	SRRT	74	74.672	ENSFHEG00000002756	srrt	89	74.402	Fundulus_heteroclitus
ENSLAFG00000007725	SRRT	95	60.686	ENSGMOG00000018619	srrt	51	70.108	Gadus_morhua
ENSLAFG00000007725	SRRT	53	74.839	ENSGAFG00000005423	srrt	51	74.839	Gambusia_affinis
ENSLAFG00000007725	SRRT	93	53.178	ENSGAFG00000020383	-	54	61.017	Gambusia_affinis
ENSLAFG00000007725	SRRT	95	63.014	ENSGACG00000020387	srrt	51	74.573	Gasterosteus_aculeatus
ENSLAFG00000007725	SRRT	93	51.939	ENSGACG00000001100	-	53	61.345	Gasterosteus_aculeatus
ENSLAFG00000007725	SRRT	100	98.288	ENSGGOG00000001508	SRRT	99	98.288	Gorilla_gorilla
ENSLAFG00000007725	SRRT	53	74.839	ENSHBUG00000002942	srrt	50	74.839	Haplochromis_burtoni
ENSLAFG00000007725	SRRT	100	97.149	ENSHGLG00000008344	Srrt	100	97.149	Heterocephalus_glaber_female
ENSLAFG00000007725	SRRT	100	97.257	ENSHGLG00100018857	Srrt	100	97.257	Heterocephalus_glaber_male
ENSLAFG00000007725	SRRT	98	63.563	ENSHCOG00000005403	srrt	56	71.613	Hippocampus_comes
ENSLAFG00000007725	SRRT	93	52.580	ENSHCOG00000008904	-	56	60.805	Hippocampus_comes
ENSLAFG00000007725	SRRT	100	97.374	ENSSTOG00000013776	SRRT	100	97.374	Ictidomys_tridecemlineatus
ENSLAFG00000007725	SRRT	100	96.000	ENSJJAG00000010446	Srrt	100	96.000	Jaculus_jaculus
ENSLAFG00000007725	SRRT	95	64.755	ENSKMAG00000013599	srrt	54	74.409	Kryptolebias_marmoratus
ENSLAFG00000007725	SRRT	93	53.791	ENSKMAG00000008468	-	53	62.346	Kryptolebias_marmoratus
ENSLAFG00000007725	SRRT	96	64.894	ENSLBEG00000016308	srrt	54	76.180	Labrus_bergylta
ENSLAFG00000007725	SRRT	95	64.447	ENSLACG00000001089	SRRT	96	64.865	Latimeria_chalumnae
ENSLAFG00000007725	SRRT	67	81.346	ENSLOCG00000013658	srrt	100	61.383	Lepisosteus_oculatus
ENSLAFG00000007725	SRRT	100	97.374	ENSMFAG00000033745	SRRT	100	97.374	Macaca_fascicularis
ENSLAFG00000007725	SRRT	100	97.945	ENSMMUG00000021255	SRRT	100	97.945	Macaca_mulatta
ENSLAFG00000007725	SRRT	100	98.057	ENSMNEG00000041864	SRRT	100	98.057	Macaca_nemestrina
ENSLAFG00000007725	SRRT	100	97.374	ENSMLEG00000029479	SRRT	100	97.374	Mandrillus_leucophaeus
ENSLAFG00000007725	SRRT	53	73.548	ENSMAMG00000014311	srrt	96	65.313	Mastacembelus_armatus
ENSLAFG00000007725	SRRT	93	54.675	ENSMAMG00000010681	-	52	65.328	Mastacembelus_armatus
ENSLAFG00000007725	SRRT	53	74.624	ENSMZEG00005016135	srrt	50	74.624	Maylandia_zebra
ENSLAFG00000007725	SRRT	93	52.257	ENSMZEG00005028002	-	52	63.636	Maylandia_zebra
ENSLAFG00000007725	SRRT	100	96.686	ENSMAUG00000011386	Srrt	100	96.686	Mesocricetus_auratus
ENSLAFG00000007725	SRRT	100	98.059	ENSMICG00000009471	SRRT	100	98.059	Microcebus_murinus
ENSLAFG00000007725	SRRT	100	96.800	ENSMOCG00000001971	Srrt	100	96.800	Microtus_ochrogaster
ENSLAFG00000007725	SRRT	95	65.517	ENSMMOG00000016399	srrt	96	64.066	Mola_mola
ENSLAFG00000007725	SRRT	87	55.284	ENSMMOG00000011137	-	55	65.672	Mola_mola
ENSLAFG00000007725	SRRT	54	89.518	ENSMODG00000004862	SRRT	90	90.814	Monodelphis_domestica
ENSLAFG00000007725	SRRT	90	62.149	ENSMALG00000018604	srrt	80	71.613	Monopterus_albus
ENSLAFG00000007725	SRRT	59	49.123	ENSMALG00000005567	-	84	52.043	Monopterus_albus
ENSLAFG00000007725	SRRT	100	97.257	MGP_CAROLIEiJ_G0027870	Srrt	100	97.794	Mus_caroli
ENSLAFG00000007725	SRRT	100	97.257	ENSMUSG00000037364	Srrt	100	97.257	Mus_musculus
ENSLAFG00000007725	SRRT	100	97.029	MGP_PahariEiJ_G0024456	Srrt	100	97.426	Mus_pahari
ENSLAFG00000007725	SRRT	100	97.257	MGP_SPRETEiJ_G0028875	Srrt	100	97.794	Mus_spretus
ENSLAFG00000007725	SRRT	100	98.288	ENSMPUG00000015839	SRRT	100	98.288	Mustela_putorius_furo
ENSLAFG00000007725	SRRT	100	97.717	ENSMLUG00000009975	SRRT	100	97.717	Myotis_lucifugus
ENSLAFG00000007725	SRRT	100	97.143	ENSNGAG00000023715	Srrt	100	97.143	Nannospalax_galili
ENSLAFG00000007725	SRRT	53	73.118	ENSNBRG00000019100	srrt	52	73.118	Neolamprologus_brichardi
ENSLAFG00000007725	SRRT	95	86.506	ENSNLEG00000011987	SRRT	99	85.140	Nomascus_leucogenys
ENSLAFG00000007725	SRRT	98	74.710	ENSMEUG00000011941	SRRT	98	72.274	Notamacropus_eugenii
ENSLAFG00000007725	SRRT	63	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSLAFG00000007725	SRRT	100	96.571	ENSODEG00000016856	SRRT	100	96.571	Octodon_degus
ENSLAFG00000007725	SRRT	93	54.276	ENSONIG00000016080	-	52	62.869	Oreochromis_niloticus
ENSLAFG00000007725	SRRT	53	75.054	ENSONIG00000004242	srrt	52	74.839	Oreochromis_niloticus
ENSLAFG00000007725	SRRT	96	64.624	ENSORLG00000008120	srrt	52	73.978	Oryzias_latipes
ENSLAFG00000007725	SRRT	96	65.081	ENSORLG00020003058	srrt	52	73.763	Oryzias_latipes_hni
ENSLAFG00000007725	SRRT	96	64.965	ENSORLG00015008062	srrt	52	73.763	Oryzias_latipes_hsok
ENSLAFG00000007725	SRRT	96	64.740	ENSOMEG00000003155	srrt	85	74.194	Oryzias_melastigma
ENSLAFG00000007725	SRRT	93	57.005	ENSOMEG00000006963	-	96	56.959	Oryzias_melastigma
ENSLAFG00000007725	SRRT	100	98.402	ENSOGAG00000017242	SRRT	100	98.402	Otolemur_garnettii
ENSLAFG00000007725	SRRT	100	96.804	ENSOARG00000015645	SRRT	100	96.804	Ovis_aries
ENSLAFG00000007725	SRRT	100	97.603	ENSPPAG00000041090	SRRT	100	97.603	Pan_paniscus
ENSLAFG00000007725	SRRT	100	97.489	ENSPPRG00000009557	SRRT	100	97.489	Panthera_pardus
ENSLAFG00000007725	SRRT	100	98.288	ENSPTIG00000014355	SRRT	100	98.288	Panthera_tigris_altaica
ENSLAFG00000007725	SRRT	100	97.603	ENSPTRG00000019511	SRRT	100	97.603	Pan_troglodytes
ENSLAFG00000007725	SRRT	97	95.465	ENSPANG00000020763	SRRT	98	95.465	Papio_anubis
ENSLAFG00000007725	SRRT	94	66.307	ENSPKIG00000022212	-	52	76.129	Paramormyrops_kingsleyae
ENSLAFG00000007725	SRRT	96	68.941	ENSPKIG00000005434	srrt	54	79.015	Paramormyrops_kingsleyae
ENSLAFG00000007725	SRRT	95	79.597	ENSPSIG00000016311	SRRT	96	80.283	Pelodiscus_sinensis
ENSLAFG00000007725	SRRT	96	65.912	ENSPMGG00000002841	srrt	56	74.409	Periophthalmus_magnuspinnatus
ENSLAFG00000007725	SRRT	98	93.684	ENSPEMG00000010834	Srrt	98	93.801	Peromyscus_maniculatus_bairdii
ENSLAFG00000007725	SRRT	96	55.294	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSLAFG00000007725	SRRT	98	90.255	ENSPCIG00000000816	SRRT	98	89.211	Phascolarctos_cinereus
ENSLAFG00000007725	SRRT	53	74.893	ENSPFOG00000005704	srrt	51	74.893	Poecilia_formosa
ENSLAFG00000007725	SRRT	93	52.798	ENSPFOG00000016554	-	54	60.805	Poecilia_formosa
ENSLAFG00000007725	SRRT	95	63.889	ENSPLAG00000021992	srrt	51	74.409	Poecilia_latipinna
ENSLAFG00000007725	SRRT	93	52.683	ENSPLAG00000004526	-	55	60.465	Poecilia_latipinna
ENSLAFG00000007725	SRRT	90	51.945	ENSPMEG00000001520	-	53	59.732	Poecilia_mexicana
ENSLAFG00000007725	SRRT	79	74.464	ENSPMEG00000001182	srrt	96	64.236	Poecilia_mexicana
ENSLAFG00000007725	SRRT	95	64.808	ENSPREG00000022308	srrt	51	74.893	Poecilia_reticulata
ENSLAFG00000007725	SRRT	98	84.229	ENSPPYG00000017432	SRRT	98	84.444	Pongo_abelii
ENSLAFG00000007725	SRRT	100	94.457	ENSPCAG00000001621	SRRT	100	94.457	Procavia_capensis
ENSLAFG00000007725	SRRT	100	98.288	ENSPCOG00000025751	SRRT	100	98.288	Propithecus_coquereli
ENSLAFG00000007725	SRRT	78	90.882	ENSPVAG00000000834	SRRT	100	90.882	Pteropus_vampyrus
ENSLAFG00000007725	SRRT	53	74.624	ENSPNYG00000018710	srrt	52	74.624	Pundamilia_nyererei
ENSLAFG00000007725	SRRT	78	77.333	ENSPNAG00000010629	srrt	95	52.144	Pygocentrus_nattereri
ENSLAFG00000007725	SRRT	54	85.684	ENSRNOG00000048277	AABR07035787.1	93	85.684	Rattus_norvegicus
ENSLAFG00000007725	SRRT	100	97.945	ENSRBIG00000035718	SRRT	100	97.945	Rhinopithecus_bieti
ENSLAFG00000007725	SRRT	100	97.945	ENSRROG00000030622	SRRT	100	97.945	Rhinopithecus_roxellana
ENSLAFG00000007725	SRRT	100	97.945	ENSSBOG00000033570	SRRT	100	97.945	Saimiri_boliviensis_boliviensis
ENSLAFG00000007725	SRRT	72	86.164	ENSSHAG00000007349	-	100	84.748	Sarcophilus_harrisii
ENSLAFG00000007725	SRRT	94	68.889	ENSSFOG00015017293	srrt	96	68.109	Scleropages_formosus
ENSLAFG00000007725	SRRT	53	61.635	ENSSMAG00000018195	-	89	61.378	Scophthalmus_maximus
ENSLAFG00000007725	SRRT	95	65.263	ENSSMAG00000015342	srrt	96	64.884	Scophthalmus_maximus
ENSLAFG00000007725	SRRT	54	53.814	ENSSDUG00000002051	-	93	54.008	Seriola_dumerili
ENSLAFG00000007725	SRRT	53	74.839	ENSSDUG00000012049	srrt	91	65.092	Seriola_dumerili
ENSLAFG00000007725	SRRT	84	74.409	ENSSLDG00000017477	srrt	81	75.269	Seriola_lalandi_dorsalis
ENSLAFG00000007725	SRRT	53	75.000	ENSSPAG00000005665	srrt	51	75.000	Stegastes_partitus
ENSLAFG00000007725	SRRT	82	52.887	ENSSPAG00000018943	-	95	56.407	Stegastes_partitus
ENSLAFG00000007725	SRRT	95	93.983	ENSSSCG00000024789	SRRT	99	91.849	Sus_scrofa
ENSLAFG00000007725	SRRT	96	64.569	ENSTRUG00000016075	srrt	96	64.195	Takifugu_rubripes
ENSLAFG00000007725	SRRT	90	54.819	ENSTRUG00000000023	-	94	55.164	Takifugu_rubripes
ENSLAFG00000007725	SRRT	93	52.273	ENSTNIG00000003111	-	53	61.441	Tetraodon_nigroviridis
ENSLAFG00000007725	SRRT	74	63.323	ENSTNIG00000011779	srrt	72	72.973	Tetraodon_nigroviridis
ENSLAFG00000007725	SRRT	63	96.721	ENSTBEG00000005212	SRRT	62	96.721	Tupaia_belangeri
ENSLAFG00000007725	SRRT	100	97.717	ENSTTRG00000011104	SRRT	100	97.717	Tursiops_truncatus
ENSLAFG00000007725	SRRT	95	98.325	ENSUAMG00000027997	SRRT	98	98.325	Ursus_americanus
ENSLAFG00000007725	SRRT	100	98.402	ENSUMAG00000011295	SRRT	100	98.402	Ursus_maritimus
ENSLAFG00000007725	SRRT	100	98.288	ENSVVUG00000023572	SRRT	100	98.288	Vulpes_vulpes
ENSLAFG00000007725	SRRT	71	81.366	ENSXETG00000025124	srrt	96	62.559	Xenopus_tropicalis
ENSLAFG00000007725	SRRT	57	49.004	ENSXCOG00000013105	-	90	51.068	Xiphophorus_couchianus
ENSLAFG00000007725	SRRT	93	53.358	ENSXMAG00000002090	-	54	61.064	Xiphophorus_maculatus
ENSLAFG00000007725	SRRT	96	62.529	ENSXMAG00000007627	srrt	85	75.269	Xiphophorus_maculatus