EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLAFG00000007795 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 34582 bases
Position: chrscaffold_51:13915060-13949641
Accession: 100668937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000006544	ResIII	PF04851.15	6.5e-11	1	1
ENSLAFP00000006544	DEAD	PF00270.29	3.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000007797	SMARCA5-201	3159	-	ENSLAFP00000006544	1052 (aa)	XP_003417549	G3T0N2

Gene Model

Click here to download ENSLAFG00000007795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000007795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLAFG00000007795	SMARCA5	53	42.509	ENSLAFG00000018136	CHD1L	65	42.509
ENSLAFG00000007795	SMARCA5	93	84.701	ENSLAFG00000000896	SMARCA1	98	84.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000007795	SMARCA5	100	98.574	ENSG00000153147	SMARCA5	100	98.574	Homo_sapiens
ENSLAFG00000007795	SMARCA5	100	98.764	ENSAMEG00000009585	SMARCA5	100	98.764	Ailuropoda_melanoleuca
ENSLAFG00000007795	SMARCA5	91	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSLAFG00000007795	SMARCA5	94	96.777	ENSACAG00000003038	SMARCA5	96	96.590	Anolis_carolinensis
ENSLAFG00000007795	SMARCA5	100	98.574	ENSANAG00000019345	SMARCA5	100	98.574	Aotus_nancymaae
ENSLAFG00000007795	SMARCA5	100	98.384	ENSBTAG00000003399	SMARCA5	100	98.384	Bos_taurus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSCJAG00000002735	SMARCA5	100	98.669	Callithrix_jacchus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSCAFG00000007525	SMARCA5	100	98.669	Canis_familiaris
ENSLAFG00000007795	SMARCA5	98	98.643	ENSCAFG00020025641	SMARCA5	99	98.643	Canis_lupus_dingo
ENSLAFG00000007795	SMARCA5	100	96.958	ENSCHIG00000016375	-	100	96.958	Capra_hircus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSCHIG00000013730	-	100	98.669	Capra_hircus
ENSLAFG00000007795	SMARCA5	96	98.710	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSLAFG00000007795	SMARCA5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSLAFG00000007795	SMARCA5	100	97.909	ENSCPOG00000002259	SMARCA5	100	97.909	Cavia_porcellus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSCCAG00000027215	SMARCA5	100	98.669	Cebus_capucinus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSCATG00000044917	SMARCA5	100	98.669	Cercocebus_atys
ENSLAFG00000007795	SMARCA5	99	95.498	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSLAFG00000007795	SMARCA5	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSLAFG00000007795	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSLAFG00000007795	SMARCA5	95	98.295	ENSCPBG00000027535	SMARCA5	96	98.297	Chrysemys_picta_bellii
ENSLAFG00000007795	SMARCA5	100	98.574	ENSCANG00000041629	SMARCA5	100	98.574	Colobus_angolensis_palliatus
ENSLAFG00000007795	SMARCA5	99	97.719	ENSCGRG00001012719	Smarca5	99	97.719	Cricetulus_griseus_chok1gshd
ENSLAFG00000007795	SMARCA5	95	99.298	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSLAFG00000007795	SMARCA5	98	95.164	ENSDNOG00000009158	SMARCA5	97	95.965	Dasypus_novemcinctus
ENSLAFG00000007795	SMARCA5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSLAFG00000007795	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSLAFG00000007795	SMARCA5	100	99.144	ENSEASG00005001866	SMARCA5	100	99.144	Equus_asinus_asinus
ENSLAFG00000007795	SMARCA5	100	99.144	ENSECAG00000002676	SMARCA5	100	99.144	Equus_caballus
ENSLAFG00000007795	SMARCA5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSLAFG00000007795	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSLAFG00000007795	SMARCA5	100	98.764	ENSFCAG00000004544	SMARCA5	100	98.764	Felis_catus
ENSLAFG00000007795	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSLAFG00000007795	SMARCA5	99	95.802	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSLAFG00000007795	SMARCA5	97	86.542	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSLAFG00000007795	SMARCA5	95	97.791	ENSGALG00000009913	SMARCA5	96	97.598	Gallus_gallus
ENSLAFG00000007795	SMARCA5	93	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSLAFG00000007795	SMARCA5	96	97.431	ENSGAGG00000019882	SMARCA5	96	98.397	Gopherus_agassizii
ENSLAFG00000007795	SMARCA5	100	98.574	ENSGGOG00000012595	SMARCA5	100	98.574	Gorilla_gorilla
ENSLAFG00000007795	SMARCA5	96	89.573	ENSHGLG00000000317	-	95	89.679	Heterocephalus_glaber_female
ENSLAFG00000007795	SMARCA5	100	97.719	ENSHGLG00000000816	-	99	97.719	Heterocephalus_glaber_female
ENSLAFG00000007795	SMARCA5	96	98.216	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSLAFG00000007795	SMARCA5	100	98.481	ENSSTOG00000010683	SMARCA5	99	98.481	Ictidomys_tridecemlineatus
ENSLAFG00000007795	SMARCA5	100	97.624	ENSJJAG00000014965	Smarca5	100	97.624	Jaculus_jaculus
ENSLAFG00000007795	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSLAFG00000007795	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSMFAG00000043649	SMARCA5	100	98.669	Macaca_fascicularis
ENSLAFG00000007795	SMARCA5	100	98.669	ENSMMUG00000000829	SMARCA5	100	98.669	Macaca_mulatta
ENSLAFG00000007795	SMARCA5	100	98.669	ENSMNEG00000031916	SMARCA5	100	98.669	Macaca_nemestrina
ENSLAFG00000007795	SMARCA5	100	98.669	ENSMLEG00000042393	SMARCA5	100	98.669	Mandrillus_leucophaeus
ENSLAFG00000007795	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSLAFG00000007795	SMARCA5	94	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSLAFG00000007795	SMARCA5	100	98.859	ENSMICG00000003971	SMARCA5	100	98.859	Microcebus_murinus
ENSLAFG00000007795	SMARCA5	99	97.909	ENSMOCG00000016986	-	99	97.909	Microtus_ochrogaster
ENSLAFG00000007795	SMARCA5	100	96.019	ENSMODG00000000391	SMARCA5	95	99.098	Monodelphis_domestica
ENSLAFG00000007795	SMARCA5	100	97.909	ENSMUSG00000031715	Smarca5	100	97.909	Mus_musculus
ENSLAFG00000007795	SMARCA5	100	98.099	MGP_PahariEiJ_G0022862	Smarca5	100	98.099	Mus_pahari
ENSLAFG00000007795	SMARCA5	100	98.669	ENSMLUG00000000468	SMARCA5	100	98.669	Myotis_lucifugus
ENSLAFG00000007795	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSLAFG00000007795	SMARCA5	100	98.669	ENSNLEG00000005383	SMARCA5	100	98.669	Nomascus_leucogenys
ENSLAFG00000007795	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSLAFG00000007795	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSLAFG00000007795	SMARCA5	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSLAFG00000007795	SMARCA5	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSLAFG00000007795	SMARCA5	100	98.764	ENSOGAG00000009702	SMARCA5	100	98.764	Otolemur_garnettii
ENSLAFG00000007795	SMARCA5	99	98.382	ENSOARG00000010589	SMARCA5	99	98.382	Ovis_aries
ENSLAFG00000007795	SMARCA5	100	98.384	ENSPPAG00000028523	SMARCA5	99	99.396	Pan_paniscus
ENSLAFG00000007795	SMARCA5	97	93.457	ENSPPRG00000004925	SMARCA5	98	93.907	Panthera_pardus
ENSLAFG00000007795	SMARCA5	96	99.505	ENSPTIG00000020959	SMARCA5	97	99.505	Panthera_tigris_altaica
ENSLAFG00000007795	SMARCA5	100	98.479	ENSPTRG00000016472	SMARCA5	99	99.496	Pan_troglodytes
ENSLAFG00000007795	SMARCA5	100	98.669	ENSPANG00000001175	SMARCA5	100	98.669	Papio_anubis
ENSLAFG00000007795	SMARCA5	93	91.104	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSLAFG00000007795	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSLAFG00000007795	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSLAFG00000007795	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSLAFG00000007795	SMARCA5	97	97.551	ENSPEMG00000008060	Smarca5	99	97.551	Peromyscus_maniculatus_bairdii
ENSLAFG00000007795	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSLAFG00000007795	SMARCA5	96	69.685	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSLAFG00000007795	SMARCA5	100	95.932	ENSPCIG00000003926	SMARCA5	95	99.098	Phascolarctos_cinereus
ENSLAFG00000007795	SMARCA5	100	98.669	ENSPPYG00000015091	SMARCA5	100	98.669	Pongo_abelii
ENSLAFG00000007795	SMARCA5	86	90.841	ENSPCAG00000014230	SMARCA5	90	90.841	Procavia_capensis
ENSLAFG00000007795	SMARCA5	100	96.103	ENSPCOG00000026744	SMARCA5	100	96.103	Propithecus_coquereli
ENSLAFG00000007795	SMARCA5	99	98.763	ENSPVAG00000006482	SMARCA5	100	98.763	Pteropus_vampyrus
ENSLAFG00000007795	SMARCA5	97	88.333	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSLAFG00000007795	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSLAFG00000007795	SMARCA5	100	98.575	ENSRBIG00000044644	SMARCA5	100	98.575	Rhinopithecus_bieti
ENSLAFG00000007795	SMARCA5	98	98.451	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSLAFG00000007795	SMARCA5	100	98.479	ENSSBOG00000036257	SMARCA5	100	98.479	Saimiri_boliviensis_boliviensis
ENSLAFG00000007795	SMARCA5	94	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSLAFG00000007795	SMARCA5	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSLAFG00000007795	SMARCA5	97	94.624	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSLAFG00000007795	SMARCA5	100	98.384	ENSSSCG00000009047	SMARCA5	100	98.384	Sus_scrofa
ENSLAFG00000007795	SMARCA5	96	96.226	ENSTGUG00000002408	SMARCA5	99	96.226	Taeniopygia_guttata
ENSLAFG00000007795	SMARCA5	98	98.740	ENSUAMG00000023495	SMARCA5	99	98.740	Ursus_americanus
ENSLAFG00000007795	SMARCA5	95	99.701	ENSUMAG00000015324	SMARCA5	97	99.701	Ursus_maritimus
ENSLAFG00000007795	SMARCA5	100	98.289	ENSVPAG00000008982	SMARCA5	100	98.289	Vicugna_pacos
ENSLAFG00000007795	SMARCA5	100	98.764	ENSVVUG00000017473	SMARCA5	100	98.764	Vulpes_vulpes
ENSLAFG00000007795	SMARCA5	95	88.756	ENSXETG00000017566	smarca5	95	93.333	Xenopus_tropicalis