EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLAFG00000008398 (Gene tree)
Gene ID: -
Gene Symbol: PDCD11
Alias: ALG-4|KIAA0185|RRP5
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Loxodonta_africana
Status: putative
Strand: Minus strand
Length: 40931 bases
Position: chrscaffold_10:15011957-15052887
Accession: 13408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLAFP00000007049	Suf	PF05843.14	1.9e-12	1	1
ENSLAFP00000007049	S1	PF00575.23	1.5e-71	1	5
ENSLAFP00000007049	S1	PF00575.23	1.5e-71	2	5
ENSLAFP00000007049	S1	PF00575.23	1.5e-71	3	5
ENSLAFP00000007049	S1	PF00575.23	1.5e-71	4	5
ENSLAFP00000007049	S1	PF00575.23	1.5e-71	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLAFT00000008401	PDCD11-201	5508	-	ENSLAFP00000007049	1835 (aa)	-	G3T1R4

Gene Model

Click here to download ENSLAFG00000008398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLAFG00000008398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLAFG00000008398	PDCD11	100	84.472	ENSG00000148843	PDCD11	100	84.542	Homo_sapiens
ENSLAFG00000008398	PDCD11	99	44.062	ENSAPOG00000015629	pdcd11	99	44.319	Acanthochromis_polyacanthus
ENSLAFG00000008398	PDCD11	99	85.585	ENSAMEG00000017935	PDCD11	99	85.532	Ailuropoda_melanoleuca
ENSLAFG00000008398	PDCD11	50	41.469	ENSACIG00000006458	-	98	41.469	Amphilophus_citrinellus
ENSLAFG00000008398	PDCD11	99	44.367	ENSAOCG00000015287	pdcd11	99	44.504	Amphiprion_ocellaris
ENSLAFG00000008398	PDCD11	54	42.814	ENSAPEG00000020240	pdcd11	96	42.814	Amphiprion_percula
ENSLAFG00000008398	PDCD11	99	44.809	ENSATEG00000021043	pdcd11	99	44.970	Anabas_testudineus
ENSLAFG00000008398	PDCD11	99	55.147	ENSAPLG00000010301	PDCD11	99	55.206	Anas_platyrhynchos
ENSLAFG00000008398	PDCD11	99	55.223	ENSACAG00000004796	PDCD11	99	55.411	Anolis_carolinensis
ENSLAFG00000008398	PDCD11	99	84.109	ENSANAG00000034576	PDCD11	99	84.216	Aotus_nancymaae
ENSLAFG00000008398	PDCD11	91	60.294	ENSACLG00000018236	pdcd11	99	60.294	Astatotilapia_calliptera
ENSLAFG00000008398	PDCD11	99	40.416	ENSAMXG00000005458	pdcd11	100	40.416	Astyanax_mexicanus
ENSLAFG00000008398	PDCD11	100	82.641	ENSBTAG00000009715	PDCD11	100	82.268	Bos_taurus
ENSLAFG00000008398	PDCD11	99	83.645	ENSCJAG00000018257	PDCD11	99	83.859	Callithrix_jacchus
ENSLAFG00000008398	PDCD11	99	85.646	ENSCAFG00000010411	PDCD11	100	85.592	Canis_familiaris
ENSLAFG00000008398	PDCD11	99	86.641	ENSCAFG00020010369	PDCD11	100	86.641	Canis_lupus_dingo
ENSLAFG00000008398	PDCD11	99	82.472	ENSCHIG00000025218	PDCD11	100	82.419	Capra_hircus
ENSLAFG00000008398	PDCD11	98	76.648	ENSTSYG00000033423	PDCD11	100	76.648	Carlito_syrichta
ENSLAFG00000008398	PDCD11	91	70.730	ENSCAPG00000005386	PDCD11	99	70.730	Cavia_aperea
ENSLAFG00000008398	PDCD11	100	78.919	ENSCPOG00000010957	PDCD11	99	80.023	Cavia_porcellus
ENSLAFG00000008398	PDCD11	99	83.805	ENSCCAG00000018950	PDCD11	99	84.019	Cebus_capucinus
ENSLAFG00000008398	PDCD11	100	85.021	ENSCATG00000044331	PDCD11	100	85.128	Cercocebus_atys
ENSLAFG00000008398	PDCD11	100	80.922	ENSCLAG00000001029	PDCD11	100	80.922	Chinchilla_lanigera
ENSLAFG00000008398	PDCD11	100	84.845	ENSCSAG00000005346	PDCD11	100	84.952	Chlorocebus_sabaeus
ENSLAFG00000008398	PDCD11	81	97.674	ENSCHOG00000004796	PDCD11	90	97.674	Choloepus_hoffmanni
ENSLAFG00000008398	PDCD11	92	70.774	ENSCPBG00000024487	PDCD11	99	71.714	Chrysemys_picta_bellii
ENSLAFG00000008398	PDCD11	100	84.739	ENSCANG00000043300	PDCD11	100	84.845	Colobus_angolensis_palliatus
ENSLAFG00000008398	PDCD11	100	78.564	ENSCGRG00001006458	Pdcd11	100	78.564	Cricetulus_griseus_chok1gshd
ENSLAFG00000008398	PDCD11	100	78.468	ENSCGRG00000003583	Pdcd11	100	78.468	Cricetulus_griseus_crigri
ENSLAFG00000008398	PDCD11	97	44.027	ENSCSEG00000010739	pdcd11	99	43.965	Cynoglossus_semilaevis
ENSLAFG00000008398	PDCD11	99	42.756	ENSCVAG00000018903	pdcd11	99	43.224	Cyprinodon_variegatus
ENSLAFG00000008398	PDCD11	99	42.972	ENSDARG00000052480	pdcd11	99	43.185	Danio_rerio
ENSLAFG00000008398	PDCD11	100	84.141	ENSDNOG00000013838	PDCD11	100	84.141	Dasypus_novemcinctus
ENSLAFG00000008398	PDCD11	100	81.720	ENSDORG00000010420	Pdcd11	100	81.828	Dipodomys_ordii
ENSLAFG00000008398	PDCD11	59	39.493	FBgn0039182	CG5728	74	39.493	Drosophila_melanogaster
ENSLAFG00000008398	PDCD11	95	75.889	ENSETEG00000000813	PDCD11	100	75.889	Echinops_telfairi
ENSLAFG00000008398	PDCD11	63	54.286	ENSEBUG00000002358	-	92	54.286	Eptatretus_burgeri
ENSLAFG00000008398	PDCD11	95	86.949	ENSEASG00005015159	PDCD11	100	86.949	Equus_asinus_asinus
ENSLAFG00000008398	PDCD11	100	86.613	ENSECAG00000020507	PDCD11	100	86.613	Equus_caballus
ENSLAFG00000008398	PDCD11	98	82.000	ENSEEUG00000009245	PDCD11	91	82.000	Erinaceus_europaeus
ENSLAFG00000008398	PDCD11	99	45.076	ENSELUG00000004211	pdcd11	99	45.405	Esox_lucius
ENSLAFG00000008398	PDCD11	99	85.882	ENSFCAG00000002384	PDCD11	99	85.517	Felis_catus
ENSLAFG00000008398	PDCD11	99	55.801	ENSFALG00000008775	PDCD11	99	55.855	Ficedula_albicollis
ENSLAFG00000008398	PDCD11	100	79.253	ENSFDAG00000009532	PDCD11	100	79.200	Fukomys_damarensis
ENSLAFG00000008398	PDCD11	90	67.491	ENSFHEG00000022997	pdcd11	96	67.491	Fundulus_heteroclitus
ENSLAFG00000008398	PDCD11	92	44.360	ENSGMOG00000004186	pdcd11	94	44.360	Gadus_morhua
ENSLAFG00000008398	PDCD11	77	53.868	ENSGALG00000008265	PDCD11	99	53.297	Gallus_gallus
ENSLAFG00000008398	PDCD11	99	43.216	ENSGAFG00000012806	pdcd11	99	43.262	Gambusia_affinis
ENSLAFG00000008398	PDCD11	99	43.883	ENSGACG00000018233	pdcd11	96	56.186	Gasterosteus_aculeatus
ENSLAFG00000008398	PDCD11	95	59.379	ENSGAGG00000024314	PDCD11	99	59.638	Gopherus_agassizii
ENSLAFG00000008398	PDCD11	100	84.258	ENSGGOG00000011621	PDCD11	100	84.365	Gorilla_gorilla
ENSLAFG00000008398	PDCD11	99	44.540	ENSHBUG00000020226	pdcd11	99	44.695	Haplochromis_burtoni
ENSLAFG00000008398	PDCD11	100	80.160	ENSHGLG00000001462	PDCD11	100	80.214	Heterocephalus_glaber_female
ENSLAFG00000008398	PDCD11	100	79.519	ENSHGLG00100018779	PDCD11	100	79.572	Heterocephalus_glaber_male
ENSLAFG00000008398	PDCD11	99	43.925	ENSHCOG00000016006	pdcd11	99	43.777	Hippocampus_comes
ENSLAFG00000008398	PDCD11	63	40.773	ENSIPUG00000015102	pdcd11	99	42.208	Ictalurus_punctatus
ENSLAFG00000008398	PDCD11	100	82.779	ENSSTOG00000014553	PDCD11	100	83.047	Ictidomys_tridecemlineatus
ENSLAFG00000008398	PDCD11	100	81.237	ENSJJAG00000015523	Pdcd11	100	81.344	Jaculus_jaculus
ENSLAFG00000008398	PDCD11	50	40.792	ENSKMAG00000021182	pdcd11	98	40.792	Kryptolebias_marmoratus
ENSLAFG00000008398	PDCD11	99	50.216	ENSLOCG00000011818	pdcd11	99	50.621	Lepisosteus_oculatus
ENSLAFG00000008398	PDCD11	100	85.165	ENSMFAG00000044058	PDCD11	100	85.272	Macaca_fascicularis
ENSLAFG00000008398	PDCD11	100	85.219	ENSMMUG00000007058	PDCD11	100	85.326	Macaca_mulatta
ENSLAFG00000008398	PDCD11	100	85.326	ENSMNEG00000040726	PDCD11	99	85.326	Macaca_nemestrina
ENSLAFG00000008398	PDCD11	100	85.149	ENSMLEG00000040978	PDCD11	100	85.149	Mandrillus_leucophaeus
ENSLAFG00000008398	PDCD11	99	44.180	ENSMAMG00000009572	pdcd11	99	44.342	Mastacembelus_armatus
ENSLAFG00000008398	PDCD11	99	44.594	ENSMZEG00005008949	pdcd11	99	44.748	Maylandia_zebra
ENSLAFG00000008398	PDCD11	99	54.705	ENSMGAG00000010482	PDCD11	99	55.077	Meleagris_gallopavo
ENSLAFG00000008398	PDCD11	94	80.043	ENSMAUG00000014924	Pdcd11	97	80.043	Mesocricetus_auratus
ENSLAFG00000008398	PDCD11	100	85.638	ENSMICG00000012421	PDCD11	100	85.638	Microcebus_murinus
ENSLAFG00000008398	PDCD11	100	77.849	ENSMOCG00000021792	Pdcd11	100	77.955	Microtus_ochrogaster
ENSLAFG00000008398	PDCD11	99	40.160	ENSMMOG00000007572	pdcd11	99	42.156	Mola_mola
ENSLAFG00000008398	PDCD11	99	63.077	ENSMODG00000011077	PDCD11	99	63.395	Monodelphis_domestica
ENSLAFG00000008398	PDCD11	99	39.174	ENSMALG00000003859	pdcd11	98	43.366	Monopterus_albus
ENSLAFG00000008398	PDCD11	100	77.043	MGP_CAROLIEiJ_G0023050	Pdcd11	100	77.461	Mus_caroli
ENSLAFG00000008398	PDCD11	100	77.438	ENSMUSG00000025047	Pdcd11	100	77.492	Mus_musculus
ENSLAFG00000008398	PDCD11	100	77.968	MGP_PahariEiJ_G0014540	Pdcd11	100	78.182	Mus_pahari
ENSLAFG00000008398	PDCD11	100	77.361	MGP_SPRETEiJ_G0023971	Pdcd11	100	77.414	Mus_spretus
ENSLAFG00000008398	PDCD11	99	85.752	ENSMPUG00000016829	PDCD11	100	85.379	Mustela_putorius_furo
ENSLAFG00000008398	PDCD11	100	84.787	ENSMLUG00000004997	PDCD11	100	84.468	Myotis_lucifugus
ENSLAFG00000008398	PDCD11	100	81.377	ENSNGAG00000018143	Pdcd11	100	81.323	Nannospalax_galili
ENSLAFG00000008398	PDCD11	86	53.116	ENSNBRG00000021596	pdcd11	99	52.368	Neolamprologus_brichardi
ENSLAFG00000008398	PDCD11	100	81.687	ENSNLEG00000026700	PDCD11	100	81.954	Nomascus_leucogenys
ENSLAFG00000008398	PDCD11	70	80.349	ENSMEUG00000013719	-	71	80.349	Notamacropus_eugenii
ENSLAFG00000008398	PDCD11	100	77.867	ENSOPRG00000010593	PDCD11	100	77.867	Ochotona_princeps
ENSLAFG00000008398	PDCD11	100	78.488	ENSODEG00000008079	PDCD11	99	78.701	Octodon_degus
ENSLAFG00000008398	PDCD11	99	44.432	ENSONIG00000018835	pdcd11	99	44.724	Oreochromis_niloticus
ENSLAFG00000008398	PDCD11	99	60.323	ENSOANG00000001636	-	99	60.377	Ornithorhynchus_anatinus
ENSLAFG00000008398	PDCD11	100	83.653	ENSOCUG00000006312	PDCD11	100	83.440	Oryctolagus_cuniculus
ENSLAFG00000008398	PDCD11	99	44.019	ENSORLG00020003642	pdcd11	99	44.110	Oryzias_latipes_hni
ENSLAFG00000008398	PDCD11	99	43.996	ENSORLG00015001618	pdcd11	99	43.978	Oryzias_latipes_hsok
ENSLAFG00000008398	PDCD11	65	45.447	ENSOMEG00000010904	pdcd11	98	45.012	Oryzias_melastigma
ENSLAFG00000008398	PDCD11	100	83.253	ENSOGAG00000008683	PDCD11	100	83.360	Otolemur_garnettii
ENSLAFG00000008398	PDCD11	99	82.259	ENSOARG00000003719	PDCD11	100	82.206	Ovis_aries
ENSLAFG00000008398	PDCD11	100	81.823	ENSPPAG00000024593	PDCD11	100	81.789	Pan_paniscus
ENSLAFG00000008398	PDCD11	99	86.095	ENSPPRG00000015133	PDCD11	99	85.669	Panthera_pardus
ENSLAFG00000008398	PDCD11	99	85.988	ENSPTIG00000011433	PDCD11	99	85.456	Panthera_tigris_altaica
ENSLAFG00000008398	PDCD11	100	84.418	ENSPTRG00000002911	PDCD11	100	84.525	Pan_troglodytes
ENSLAFG00000008398	PDCD11	100	84.952	ENSPANG00000020959	PDCD11	100	85.059	Papio_anubis
ENSLAFG00000008398	PDCD11	99	46.427	ENSPKIG00000000973	pdcd11	99	46.446	Paramormyrops_kingsleyae
ENSLAFG00000008398	PDCD11	79	57.478	ENSPSIG00000005102	PDCD11	95	57.647	Pelodiscus_sinensis
ENSLAFG00000008398	PDCD11	78	49.353	ENSPMGG00000007289	pdcd11	97	49.353	Periophthalmus_magnuspinnatus
ENSLAFG00000008398	PDCD11	100	77.760	ENSPEMG00000010315	Pdcd11	100	77.547	Peromyscus_maniculatus_bairdii
ENSLAFG00000008398	PDCD11	99	42.427	ENSPMAG00000003098	pdcd11	99	42.933	Petromyzon_marinus
ENSLAFG00000008398	PDCD11	100	67.090	ENSPCIG00000001118	PDCD11	100	67.449	Phascolarctos_cinereus
ENSLAFG00000008398	PDCD11	99	44.570	ENSPFOG00000006012	pdcd11	99	45.238	Poecilia_formosa
ENSLAFG00000008398	PDCD11	96	51.231	ENSPLAG00000014494	pdcd11	99	51.077	Poecilia_latipinna
ENSLAFG00000008398	PDCD11	90	54.237	ENSPMEG00000018177	pdcd11	99	46.059	Poecilia_mexicana
ENSLAFG00000008398	PDCD11	99	44.492	ENSPREG00000000475	pdcd11	99	45.008	Poecilia_reticulata
ENSLAFG00000008398	PDCD11	100	82.999	ENSPPYG00000002621	PDCD11	100	83.142	Pongo_abelii
ENSLAFG00000008398	PDCD11	73	85.586	ENSPCAG00000011663	PDCD11	75	85.586	Procavia_capensis
ENSLAFG00000008398	PDCD11	100	79.167	ENSPCOG00000023327	PDCD11	100	79.167	Propithecus_coquereli
ENSLAFG00000008398	PDCD11	100	84.026	ENSPVAG00000004176	PDCD11	100	83.972	Pteropus_vampyrus
ENSLAFG00000008398	PDCD11	99	44.755	ENSPNYG00000003979	pdcd11	99	44.909	Pundamilia_nyererei
ENSLAFG00000008398	PDCD11	95	45.598	ENSPNAG00000017225	pdcd11	99	46.071	Pygocentrus_nattereri
ENSLAFG00000008398	PDCD11	100	76.997	ENSRNOG00000020304	Pdcd11	99	76.997	Rattus_norvegicus
ENSLAFG00000008398	PDCD11	100	84.899	ENSRBIG00000011889	PDCD11	100	85.005	Rhinopithecus_bieti
ENSLAFG00000008398	PDCD11	100	84.845	ENSRROG00000030483	PDCD11	100	84.952	Rhinopithecus_roxellana
ENSLAFG00000008398	PDCD11	96	32.416	YMR229C	-	98	32.416	Saccharomyces_cerevisiae
ENSLAFG00000008398	PDCD11	99	73.095	ENSSBOG00000030308	PDCD11	99	73.362	Saimiri_boliviensis_boliviensis
ENSLAFG00000008398	PDCD11	99	66.135	ENSSHAG00000018258	PDCD11	99	66.188	Sarcophilus_harrisii
ENSLAFG00000008398	PDCD11	99	46.870	ENSSFOG00015003881	pdcd11	99	46.870	Scleropages_formosus
ENSLAFG00000008398	PDCD11	99	44.624	ENSSMAG00000006612	pdcd11	99	44.624	Scophthalmus_maximus
ENSLAFG00000008398	PDCD11	96	47.526	ENSSDUG00000021302	pdcd11	99	48.126	Seriola_dumerili
ENSLAFG00000008398	PDCD11	50	43.974	ENSSLDG00000010228	pdcd11	99	43.974	Seriola_lalandi_dorsalis
ENSLAFG00000008398	PDCD11	80	91.071	ENSSARG00000002540	PDCD11	74	91.071	Sorex_araneus
ENSLAFG00000008398	PDCD11	97	43.221	ENSSPAG00000017558	pdcd11	100	43.481	Stegastes_partitus
ENSLAFG00000008398	PDCD11	100	83.608	ENSSSCG00000010599	PDCD11	100	83.575	Sus_scrofa
ENSLAFG00000008398	PDCD11	76	41.051	ENSTRUG00000014291	pdcd11	99	41.203	Takifugu_rubripes
ENSLAFG00000008398	PDCD11	99	43.520	ENSTNIG00000012085	pdcd11	99	43.710	Tetraodon_nigroviridis
ENSLAFG00000008398	PDCD11	100	79.766	ENSTBEG00000001893	PDCD11	100	79.648	Tupaia_belangeri
ENSLAFG00000008398	PDCD11	99	80.106	ENSTTRG00000003356	PDCD11	99	79.840	Tursiops_truncatus
ENSLAFG00000008398	PDCD11	99	85.950	ENSUAMG00000018015	PDCD11	100	85.844	Ursus_americanus
ENSLAFG00000008398	PDCD11	100	84.130	ENSUMAG00000023567	PDCD11	100	84.183	Ursus_maritimus
ENSLAFG00000008398	PDCD11	63	85.845	ENSVPAG00000007405	PDCD11	80	85.845	Vicugna_pacos
ENSLAFG00000008398	PDCD11	99	85.539	ENSVVUG00000004457	PDCD11	100	85.486	Vulpes_vulpes
ENSLAFG00000008398	PDCD11	99	49.338	ENSXETG00000009482	pdcd11	99	49.736	Xenopus_tropicalis
ENSLAFG00000008398	PDCD11	99	39.102	ENSXCOG00000012420	pdcd11	99	39.177	Xiphophorus_couchianus
ENSLAFG00000008398	PDCD11	99	44.666	ENSXMAG00000004638	pdcd11	99	44.989	Xiphophorus_maculatus